| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is chlD [H]
Identifier: 123967848
GI number: 123967848
Start: 287181
End: 289364
Strand: Direct
Name: chlD [H]
Synonym: A9601_03111
Alternate gene names: 123967848
Gene position: 287181-289364 (Clockwise)
Preceding gene: 123967844
Following gene: 123967851
Centisome position: 17.2
GC content: 37.23
Gene sequence:
>2184_bases GTGATTTTGAAACCCGAGTTACAAGAAAAAGGAGAAATAAAAGATTTAATGAAGTCAAAGGATTCTTTTAGAGCTTTCCC TTTGGCCGCAATTACAGGTCATAGCTTATTGAAATTATCTTTACTTTTAGCTGCAGTTGATCCCAGTTTAGGGGGAGTGA TTATTGCTGGCGGAAGAGGTACTGGCAAATCAGTATTAGCGAGGGGTTTACATACTTTACTTCCTCCCATAGAGGTATTA AATAATGAATTAATACTGGAAAAGCTAACTGAGAAAAATAGTGGTACTTCATTAAAACCTATTGGTAGGAACCTAGATCC AGATAAGCCAGAGGAATGGGATATTAGTACTAATAAATTGTTGGAGGAGGTAATTGGAAGTGATTATTTGAATCAAATTG AAGAAATTCCGAAAAAAGTAAGAGAGGCTCCATTTATTCAAGTACCCATTGGTATAACTGAGGATAGGCTTGTTGGATCA ATTGATGTCGCTGCATCATTAAGTACGGGGGAACAAGTATTTCAACCCGGTATTTTAGCAGAGGCTCATAGGGGTGTTCT TTATGTAGACGATATAAATTTATTAGATGATGGTATTGTAAATTTGATTCTTGAAGCTACAGGTAGAGAGAAAAATAATA TTGAAAGAGATGGTTTAAGTCTTTCTCATCCTTGTAAGTCACTTTTAATAGCAACTTATAATCCTGAAGAAGGTGCTTTA AGAGATCATGTTTTAGATCGTTTTGCTATTGTGCTTTCAGCAGATCAATCTATTGATAATGCTCAAAGAGTTGAGATTAC AAAATCTGTTTTATCACACGCAGAAAATAATATTAAATTTTCGGAAAAATGGTCGGAAGAATCCGATAATTTATCTACTC AATTAATTTTGGCAAGGCAATGGTTAAAGGATGTCAAGATAACAAAAGAGCAAATAACCTATTTAGTGAATGAAGCTCTT AGGGGAGGTGTAGAAGGGCATAGGTCAGAATTATTTGCAGTAAAAGTAGCAAAGGCTAATGCAGCTCTTCGAGGCGATGA GAATGTAAATTCTGAGGATCTAAAAGTCGCAGTAAGGTTAGTTATTCTTCCACGAGCAATGCAAGTACCTCCAGACGATG ATGATATACAGCCACCCCCTCCGGAGGATCAGAGTCCCCCACCTCCACCTCAATCAAATAATGAAGAGTCTGAACCTGAA GCTAATGAAAATGATGATAATCAAGAGCAAGAACAAGAGGAAGATAATTCTGATGGAGAAGAAGAATCTACTCCAGAAAT TCCTGAAGAATTTATATTAGATCCTGAGGCATGTATGGTTGATCCTGATTTATTGCTTTTTTCATCAGCTAAAGCTAAAG CTGGAAATAGCGGTAGTAGATCAGTCATATTTAGTGACAGTAGAGGAAGATATGTAAAACCTATTATTCCAAGAGGTAAA GTAAAAAGAATTGCTGTAGATGCTACTCTTCGAGCTGCTGCGCCCTATCAAAAATCCAGAAGATTAAGGAACCCTAATAA ATCAATAGTTATTGAAGAAAATGATTTTAGGGCAAAGCTTCTTCAAAAAAAGGCGGGGGCTTTAGTAATTTTTCTCGTTG ATGCAAGTGGCTCTATGGCTTTAAATAGAATGCAAAGTGCCAAAGGCGCTGTAATAAGACTTTTAACAGAGGCATATGAG AATAGAGATGAAGTAGCTCTTATTCCTTTTAGAGGTAACCAGGCCGAAGTGCTTTTGCCTCCAACGAGATCAATAACTGC AGCGAAAAGAAGGCTAGAAACAATGCCTTGCGGAGGTGGATCACCTTTAGCTCATGGACTAACGCAATCAGCAAAAGTAG CAAAAAATGCTCTTTCAACAGGAGATATAGGTCAAGTTATTGTTGTAGGGATCACTGATGGCCGAGGAAATGTACCATTA GGATTATCTCTAGGACAAAATGAGGTTGAGGGAAAAGGTAACGAAAATGAAAATGTCAATTTAAAACAGGAGGTTCTAGA TATCGCTTCAAAATATCCCATGCTCGGGATAAAACTCTTAGTAATTGATACCGAGAGAAAATTTATAGCAAGTGGATTTG GTAAAGAGTTAGCAGAGGCTGCTCAAGGGAAATACGTCCAGTTGCCAAAAGCTACAGATAAAGCAATCGCAGCTATGGCT TTAAATGCTATCAATGAATTCTAA
Upstream 100 bases:
>100_bases CTCCGAGGGATATACATAGGCCATTTTTGATATTAAGATTTGATAATTCCACTACAAAAAACAAAGTTATTGGATAAATT CTATATCAGGCATTTTTAAA
Downstream 100 bases:
>100_bases GTATTTCTTATGGATAAATTTCGTTAAGAAATTTTGAAAGTCCAATCGTTAAATCTCTTATAGATTTAGTTAATTCTTTA TCTTGTGTTAATTTTTCAAA
Product: protoporphyrin IX magnesium chelatase subunit ChlD
Products: NA
Alternate protein names: Mg-chelatase subunit D; Mg-protoporphyrin IX chelatase [H]
Number of amino acids: Translated: 727; Mature: 727
Protein sequence:
>727_residues MILKPELQEKGEIKDLMKSKDSFRAFPLAAITGHSLLKLSLLLAAVDPSLGGVIIAGGRGTGKSVLARGLHTLLPPIEVL NNELILEKLTEKNSGTSLKPIGRNLDPDKPEEWDISTNKLLEEVIGSDYLNQIEEIPKKVREAPFIQVPIGITEDRLVGS IDVAASLSTGEQVFQPGILAEAHRGVLYVDDINLLDDGIVNLILEATGREKNNIERDGLSLSHPCKSLLIATYNPEEGAL RDHVLDRFAIVLSADQSIDNAQRVEITKSVLSHAENNIKFSEKWSEESDNLSTQLILARQWLKDVKITKEQITYLVNEAL RGGVEGHRSELFAVKVAKANAALRGDENVNSEDLKVAVRLVILPRAMQVPPDDDDIQPPPPEDQSPPPPPQSNNEESEPE ANENDDNQEQEQEEDNSDGEEESTPEIPEEFILDPEACMVDPDLLLFSSAKAKAGNSGSRSVIFSDSRGRYVKPIIPRGK VKRIAVDATLRAAAPYQKSRRLRNPNKSIVIEENDFRAKLLQKKAGALVIFLVDASGSMALNRMQSAKGAVIRLLTEAYE NRDEVALIPFRGNQAEVLLPPTRSITAAKRRLETMPCGGGSPLAHGLTQSAKVAKNALSTGDIGQVIVVGITDGRGNVPL GLSLGQNEVEGKGNENENVNLKQEVLDIASKYPMLGIKLLVIDTERKFIASGFGKELAEAAQGKYVQLPKATDKAIAAMA LNAINEF
Sequences:
>Translated_727_residues MILKPELQEKGEIKDLMKSKDSFRAFPLAAITGHSLLKLSLLLAAVDPSLGGVIIAGGRGTGKSVLARGLHTLLPPIEVL NNELILEKLTEKNSGTSLKPIGRNLDPDKPEEWDISTNKLLEEVIGSDYLNQIEEIPKKVREAPFIQVPIGITEDRLVGS IDVAASLSTGEQVFQPGILAEAHRGVLYVDDINLLDDGIVNLILEATGREKNNIERDGLSLSHPCKSLLIATYNPEEGAL RDHVLDRFAIVLSADQSIDNAQRVEITKSVLSHAENNIKFSEKWSEESDNLSTQLILARQWLKDVKITKEQITYLVNEAL RGGVEGHRSELFAVKVAKANAALRGDENVNSEDLKVAVRLVILPRAMQVPPDDDDIQPPPPEDQSPPPPPQSNNEESEPE ANENDDNQEQEQEEDNSDGEEESTPEIPEEFILDPEACMVDPDLLLFSSAKAKAGNSGSRSVIFSDSRGRYVKPIIPRGK VKRIAVDATLRAAAPYQKSRRLRNPNKSIVIEENDFRAKLLQKKAGALVIFLVDASGSMALNRMQSAKGAVIRLLTEAYE NRDEVALIPFRGNQAEVLLPPTRSITAAKRRLETMPCGGGSPLAHGLTQSAKVAKNALSTGDIGQVIVVGITDGRGNVPL GLSLGQNEVEGKGNENENVNLKQEVLDIASKYPMLGIKLLVIDTERKFIASGFGKELAEAAQGKYVQLPKATDKAIAAMA LNAINEF >Mature_727_residues MILKPELQEKGEIKDLMKSKDSFRAFPLAAITGHSLLKLSLLLAAVDPSLGGVIIAGGRGTGKSVLARGLHTLLPPIEVL NNELILEKLTEKNSGTSLKPIGRNLDPDKPEEWDISTNKLLEEVIGSDYLNQIEEIPKKVREAPFIQVPIGITEDRLVGS IDVAASLSTGEQVFQPGILAEAHRGVLYVDDINLLDDGIVNLILEATGREKNNIERDGLSLSHPCKSLLIATYNPEEGAL RDHVLDRFAIVLSADQSIDNAQRVEITKSVLSHAENNIKFSEKWSEESDNLSTQLILARQWLKDVKITKEQITYLVNEAL RGGVEGHRSELFAVKVAKANAALRGDENVNSEDLKVAVRLVILPRAMQVPPDDDDIQPPPPEDQSPPPPPQSNNEESEPE ANENDDNQEQEQEEDNSDGEEESTPEIPEEFILDPEACMVDPDLLLFSSAKAKAGNSGSRSVIFSDSRGRYVKPIIPRGK VKRIAVDATLRAAAPYQKSRRLRNPNKSIVIEENDFRAKLLQKKAGALVIFLVDASGSMALNRMQSAKGAVIRLLTEAYE NRDEVALIPFRGNQAEVLLPPTRSITAAKRRLETMPCGGGSPLAHGLTQSAKVAKNALSTGDIGQVIVVGITDGRGNVPL GLSLGQNEVEGKGNENENVNLKQEVLDIASKYPMLGIKLLVIDTERKFIASGFGKELAEAAQGKYVQLPKATDKAIAAMA LNAINEF
Specific function: Involved in chlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX [H]
COG id: COG1240
COG function: function code H; Mg-chelatase subunit ChlD
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR011776 - InterPro: IPR000523 - InterPro: IPR002035 [H]
Pfam domain/function: PF01078 Mg_chelatase; PF00092 VWA [H]
EC number: =6.6.1.1 [H]
Molecular weight: Translated: 79152; Mature: 79152
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILKPELQEKGEIKDLMKSKDSFRAFPLAAITGHSLLKLSLLLAAVDPSLGGVIIAGGRG CCCCCCCHHCCHHHHHHHCCHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC TGKSVLARGLHTLLPPIEVLNNELILEKLTEKNSGTSLKPIGRNLDPDKPEEWDISTNKL CCHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LEEVIGSDYLNQIEEIPKKVREAPFIQVPIGITEDRLVGSIDVAASLSTGEQVFQPGILA HHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECEEHEEECCCCHHHHCCCCHH EAHRGVLYVDDINLLDDGIVNLILEATGREKNNIERDGLSLSHPCKSLLIATYNPEEGAL HHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH RDHVLDRFAIVLSADQSIDNAQRVEITKSVLSHAENNIKFSEKWSEESDNLSTQLILARQ HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECHHHCCCCCCCHHHHHHHHH WLKDVKITKEQITYLVNEALRGGVEGHRSELFAVKVAKANAALRGDENVNSEDLKVAVRL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHE VILPRAMQVPPDDDDIQPPPPEDQSPPPPPQSNNEESEPEANENDDNQEQEQEEDNSDGE EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC EESTPEIPEEFILDPEACMVDPDLLLFSSAKAKAGNSGSRSVIFSDSRGRYVKPIIPRGK CCCCCCCCHHHCCCCHHHEECCCCEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCC VKRIAVDATLRAAAPYQKSRRLRNPNKSIVIEENDFRAKLLQKKAGALVIFLVDASGSMA EEEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCHH LNRMQSAKGAVIRLLTEAYENRDEVALIPFRGNQAEVLLPPTRSITAAKRRLETMPCGGG HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCC SPLAHGLTQSAKVAKNALSTGDIGQVIVVGITDGRGNVPLGLSLGQNEVEGKGNENENVN CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC LKQEVLDIASKYPMLGIKLLVIDTERKFIASGFGKELAEAAQGKYVQLPKATDKAIAAMA HHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHH LNAINEF HHHHHCC >Mature Secondary Structure MILKPELQEKGEIKDLMKSKDSFRAFPLAAITGHSLLKLSLLLAAVDPSLGGVIIAGGRG CCCCCCCHHCCHHHHHHHCCHHHCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC TGKSVLARGLHTLLPPIEVLNNELILEKLTEKNSGTSLKPIGRNLDPDKPEEWDISTNKL CCHHHHHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH LEEVIGSDYLNQIEEIPKKVREAPFIQVPIGITEDRLVGSIDVAASLSTGEQVFQPGILA HHHHHCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEECEEHEEECCCCHHHHCCCCHH EAHRGVLYVDDINLLDDGIVNLILEATGREKNNIERDGLSLSHPCKSLLIATYNPEEGAL HHCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH RDHVLDRFAIVLSADQSIDNAQRVEITKSVLSHAENNIKFSEKWSEESDNLSTQLILARQ HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCEECHHHCCCCCCCHHHHHHHHH WLKDVKITKEQITYLVNEALRGGVEGHRSELFAVKVAKANAALRGDENVNSEDLKVAVRL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCEECCCCCCCHHHHHHHHHE VILPRAMQVPPDDDDIQPPPPEDQSPPPPPQSNNEESEPEANENDDNQEQEQEEDNSDGE EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC EESTPEIPEEFILDPEACMVDPDLLLFSSAKAKAGNSGSRSVIFSDSRGRYVKPIIPRGK CCCCCCCCHHHCCCCHHHEECCCCEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCC VKRIAVDATLRAAAPYQKSRRLRNPNKSIVIEENDFRAKLLQKKAGALVIFLVDASGSMA EEEEEEEHHHHHCCCHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCCCHH LNRMQSAKGAVIRLLTEAYENRDEVALIPFRGNQAEVLLPPTRSITAAKRRLETMPCGGG HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHHCCCCCCC SPLAHGLTQSAKVAKNALSTGDIGQVIVVGITDGRGNVPLGLSLGQNEVEGKGNENENVN CHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC LKQEVLDIASKYPMLGIKLLVIDTERKFIASGFGKELAEAAQGKYVQLPKATDKAIAAMA HHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHH LNAINEF HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA