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The map label for this gene is ybhK [C]

Identifier: 123967851

GI number: 123967851

Start: 291140

End: 292525

Strand: Direct

Name: ybhK [C]

Synonym: A9601_03141

Alternate gene names: 123967851

Gene position: 291140-292525 (Clockwise)

Preceding gene: 123967848

Following gene: 123967855

Centisome position: 17.43

GC content: 33.19

Gene sequence:

>1386_bases
ATGTATAAGCGTAAAAAAAGGGTAAGAAGGTACTATAAAAACTTTAAAAAGTCTAATTTTGCCTTGTTTAACAAAATCTT
AAGAATTTTGAGTTGGCTTTTGCCAGGATTGGTAATAAAAAGATGGATGCTTACATCTGCGGTAGGATTTTTGACTACAT
TATTAGGCTTGGTAATTTGGACAAATTTAAGACCGCTCTATTGGCTTATTGAAATCTTTTTTTCAGTAATGACAGGTTTA
ACTAGTATTTTGCCTGTTTCATTTATGGGACCATTGATTTTTGTTATTGGAATATTATTAATAGGGATTGGACAAAATAG
AAGTATTAATTCTATTCAAAAAGCGCTTGTTCCAGAAAAAGATACATTTTTAGTTGATGCATTAAGAGTTAAAAGTAAAT
TAAACAGAGGCCCAAATATTGTTGCAATTGGGGGAGGTACAGGCTTATCTACTTTATTGAAAGGCTTAAAAAACTATAGT
AGTAATATTACAGCAATCGTAACTGTATCCGATGATGGTGGAAGTAGTGGAATTCTCAGAAAACAATTAGGTGTGCAACC
TCCTGGAGATATTAGAAATTGTTTGGCAGCCTTATCTAACGAAGAACCAACTTTAACTAGATTATTTCAGTACAGATTTT
CAGAGGGAACTGGTCTGGAGGGCCATAGTTTTGGAAATCTATTCTTGTCAGCTTTAACAACAATTACAGGCAATTTAGAA
AAAGCAGTTCAAGCCTCTAGTAAGGTTTTGGCGGTACAAGGTCAAGTTTTACCGGCGACAAATATTGATGTTATGTTATG
GGCCGAATTAGAAGATGGTGAAAAAATTTTTGGTGAAAGCAAGATCAGTAAATCTAAAAAATTAATTTCGAGGATTGGTT
ACCTACCTGAAAACCCTTCAGCTCTTCCAAGTGCTCTTGAATCTATAAAAGAAGCTGATTTAATTATTCTTGGCCCAGGT
AGTCTTTACACTTCTTTATTGCCTAATCTGTTAGTACCAGAGATAGTAGATGCTTTATTGCAAAGTAATGCTCCCAAAAT
CTATATAAGTAATTTGATGACTCAGCCTGGAGAAACAGATGGACTTGATGTCTATCAACATATCAAAGCAATAGAAAAAC
AATTATTAAATTTTGGAGTTAATACTCGAATTTTTGACTCAATATTATCTCAGACTCAATTTGAAAAGTCTCCATTAGTA
GATTATTACGAAAGTAGAGGGGCAGAGCCTGTCCAATGTAATAAAGAAAAACTATTATCTGAGGGTTATTATGTTTTGCA
AGCACCACTATATGCAAAAAGAATAACTCCAACACTAAGACATGATCCAAGGAGACTAGCAAGAGCAGTTATGTTTATTT
ACCGCAAATTAAAAAAAATAAACTAA

Upstream 100 bases:

>100_bases
TTTGCCTATTTTTAGAAATAAAAAAAGGATGTATGAATTTGATTTATAATGATTTTATATAGTCTTTAAATTTGAGAAAA
ATAATTCAAGAGGTTTTTTA

Downstream 100 bases:

>100_bases
TAAGCATCCTGAAGTTCATAGAAATCTGGCTGAATATAATCTTTTCTCAATGGCCATCCTCTCCAATCTTCAGGCATTAA
TAATCTTTTTGGATTGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MYKRKKRVRRYYKNFKKSNFALFNKILRILSWLLPGLVIKRWMLTSAVGFLTTLLGLVIWTNLRPLYWLIEIFFSVMTGL
TSILPVSFMGPLIFVIGILLIGIGQNRSINSIQKALVPEKDTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPTLTRLFQYRFSEGTGLEGHSFGNLFLSALTTITGNLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGEKIFGESKISKSKKLISRIGYLPENPSALPSALESIKEADLIILGPG
SLYTSLLPNLLVPEIVDALLQSNAPKIYISNLMTQPGETDGLDVYQHIKAIEKQLLNFGVNTRIFDSILSQTQFEKSPLV
DYYESRGAEPVQCNKEKLLSEGYYVLQAPLYAKRITPTLRHDPRRLARAVMFIYRKLKKIN

Sequences:

>Translated_461_residues
MYKRKKRVRRYYKNFKKSNFALFNKILRILSWLLPGLVIKRWMLTSAVGFLTTLLGLVIWTNLRPLYWLIEIFFSVMTGL
TSILPVSFMGPLIFVIGILLIGIGQNRSINSIQKALVPEKDTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPTLTRLFQYRFSEGTGLEGHSFGNLFLSALTTITGNLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGEKIFGESKISKSKKLISRIGYLPENPSALPSALESIKEADLIILGPG
SLYTSLLPNLLVPEIVDALLQSNAPKIYISNLMTQPGETDGLDVYQHIKAIEKQLLNFGVNTRIFDSILSQTQFEKSPLV
DYYESRGAEPVQCNKEKLLSEGYYVLQAPLYAKRITPTLRHDPRRLARAVMFIYRKLKKIN
>Mature_461_residues
MYKRKKRVRRYYKNFKKSNFALFNKILRILSWLLPGLVIKRWMLTSAVGFLTTLLGLVIWTNLRPLYWLIEIFFSVMTGL
TSILPVSFMGPLIFVIGILLIGIGQNRSINSIQKALVPEKDTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPTLTRLFQYRFSEGTGLEGHSFGNLFLSALTTITGNLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGEKIFGESKISKSKKLISRIGYLPENPSALPSALESIKEADLIILGPG
SLYTSLLPNLLVPEIVDALLQSNAPKIYISNLMTQPGETDGLDVYQHIKAIEKQLLNFGVNTRIFDSILSQTQFEKSPLV
DYYESRGAEPVQCNKEKLLSEGYYVLQAPLYAKRITPTLRHDPRRLARAVMFIYRKLKKIN

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=224, Percent_Identity=39.7321428571429, Blast_Score=140, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 51236; Mature: 51236

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKRKKRVRRYYKNFKKSNFALFNKILRILSWLLPGLVIKRWMLTSAVGFLTTLLGLVIW
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLRPLYWLIEIFFSVMTGLTSILPVSFMGPLIFVIGILLIGIGQNRSINSIQKALVPEK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
DTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYSSNITAIVTVSDDGGSSGILR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH
KQLGVQPPGDIRNCLAALSNEEPTLTRLFQYRFSEGTGLEGHSFGNLFLSALTTITGNLE
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHH
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGEKIFGESKISKSKKLISRIGYLPENPS
HHHHHHCCEEEEECCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ALPSALESIKEADLIILGPGSLYTSLLPNLLVPEIVDALLQSNAPKIYISNLMTQPGETD
HHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
GLDVYQHIKAIEKQLLNFGVNTRIFDSILSQTQFEKSPLVDYYESRGAEPVQCNKEKLLS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHH
EGYYVLQAPLYAKRITPTLRHDPRRLARAVMFIYRKLKKIN
CCCEEEECCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYKRKKRVRRYYKNFKKSNFALFNKILRILSWLLPGLVIKRWMLTSAVGFLTTLLGLVIW
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLRPLYWLIEIFFSVMTGLTSILPVSFMGPLIFVIGILLIGIGQNRSINSIQKALVPEK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
DTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYSSNITAIVTVSDDGGSSGILR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH
KQLGVQPPGDIRNCLAALSNEEPTLTRLFQYRFSEGTGLEGHSFGNLFLSALTTITGNLE
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHH
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGEKIFGESKISKSKKLISRIGYLPENPS
HHHHHHCCEEEEECCEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
ALPSALESIKEADLIILGPGSLYTSLLPNLLVPEIVDALLQSNAPKIYISNLMTQPGETD
HHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
GLDVYQHIKAIEKQLLNFGVNTRIFDSILSQTQFEKSPLVDYYESRGAEPVQCNKEKLLS
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCHHHHHH
EGYYVLQAPLYAKRITPTLRHDPRRLARAVMFIYRKLKKIN
CCCEEEECCHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]