| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is cinA [C]
Identifier: 123967816
GI number: 123967816
Start: 256725
End: 257999
Strand: Reverse
Name: cinA [C]
Synonym: A9601_02791
Alternate gene names: 123967816
Gene position: 257999-256725 (Counterclockwise)
Preceding gene: 123967817
Following gene: 123967815
Centisome position: 15.45
GC content: 33.65
Gene sequence:
>1275_bases ATGAGTCCTAACTCCAAGGGAGTTGAGATTCTTTCAATTGGAACAGAGCTACTCTTAGGAAATATTATAAATACAAATGC TCAATGGATTTCTGAACAGTTGTCCCAATTAGGCTTAAATCACTTTAGGCAATCAACTGTTGGTGATAATTGTGATCGAA TTGTAAAAGTAATTCAAGAAATTTCGAAAAGAAGTAATCTTCTAATTACAACTGGTGGTTTGGGGCCCACCCCAGATGAC TTAACTACTGAAGCAATAGCAAAATCTTTTAATGTAAATCTTTTTGAAAGACCGCACTTATGGGATGAAATTAAACAAAA ACTGCCAAACTCAAAACTCCAGGACGATTCATCTAGCTTAAGGAAACAATGTCTCTTCCCAAAAAATGCTCAAATAATTA ATAACCCTAGGGGCACTGCCCCGGGAATGATATGGGAACCAATAGAAGGATTTACTATTCTTACTTTCCCTGGAGTACCA AGTGAAATGAAAACTATGTGGGAAGAGACGGCGTGTGATTTTATTAAAACCAAATTCTCAGATAATTATTCCTTTTTTTC AAATACTCTTAAATTTGCAGGTATTGGAGAATCTAGTGTTGCAGAAAAAATTAATGATCTATTAAATCTTAAAAACCCGA CTGTTGCTCCATATGCAAACTTAGGAGAGGTTAAACTAAGAATCACAGCTCGAGCAAAGAATCATTTAGAAGCAAAAAAT ATTATTCAACCTGTAAAAGAAAAATTAAAAAAAGATTTTTCGAAATTTATTTTTGGAGAGAATGATGATACTCTTCCTAG CGTCTTAATAAGAGAATTAACCGAGAGGAACCAAACTATTGTTTTTGCTGAATCATGCACCGGAGGCCTTCTATCTTCAT CACTAACATCAATATCAGGCTCATCTAAAGTTTTTAAAGGTAGTGTAGTTTCCTACAGTAATGAGCTAAAAAATTCATTA TTAAATATTTCTGAAGAGAAGCTTACAAAATATGGAGCTGTTTCTGAAGAAGTTTGTGAGTCCATGGCAATTAATGCAAA AGAAAAATTAGGAGCAGATTGGGCAATAGCAATTAGTGGAATAGCTGGTCCTAAAGGAGGCAGTCAAGATAAACCGGTTG GACTTGTCTATATATCAATTTCTGGACCGAATAATCATATAACTAATATAAAAAAACTATTTAACTCAACCCGAAATAGA GTAGAAATTCAAACACTAAGTGTAAATGTGTGTTTGAACAGCCTCAGATTAATCCTATTATCTAATAGTAAGTAA
Upstream 100 bases:
>100_bases ACCCAGACAATTCACTGATTGAAAGTCAATGTAAAGAAAGAGTATTAACCTTATGTAATCGTTTTCCTCTTTATGAAGGC AAACTTGAAGCATCAATTAA
Downstream 100 bases:
>100_bases CTATTTTTACAAATTGAGTCAAGATACCTTATTTGATAAAGTTTGGGATTTACACAAAGTTTCAAGACTTCCAGGTGGAT CCGATCAAATATTAATTGGT
Product: molybdenum cofactor biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVKVIQEISKRSNLLITTGGLGPTPDD LTTEAIAKSFNVNLFERPHLWDEIKQKLPNSKLQDDSSSLRKQCLFPKNAQIINNPRGTAPGMIWEPIEGFTILTFPGVP SEMKTMWEETACDFIKTKFSDNYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNHLEAKN IIQPVKEKLKKDFSKFIFGENDDTLPSVLIRELTERNQTIVFAESCTGGLLSSSLTSISGSSKVFKGSVVSYSNELKNSL LNISEEKLTKYGAVSEEVCESMAINAKEKLGADWAIAISGIAGPKGGSQDKPVGLVYISISGPNNHITNIKKLFNSTRNR VEIQTLSVNVCLNSLRLILLSNSK
Sequences:
>Translated_424_residues MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVKVIQEISKRSNLLITTGGLGPTPDD LTTEAIAKSFNVNLFERPHLWDEIKQKLPNSKLQDDSSSLRKQCLFPKNAQIINNPRGTAPGMIWEPIEGFTILTFPGVP SEMKTMWEETACDFIKTKFSDNYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNHLEAKN IIQPVKEKLKKDFSKFIFGENDDTLPSVLIRELTERNQTIVFAESCTGGLLSSSLTSISGSSKVFKGSVVSYSNELKNSL LNISEEKLTKYGAVSEEVCESMAINAKEKLGADWAIAISGIAGPKGGSQDKPVGLVYISISGPNNHITNIKKLFNSTRNR VEIQTLSVNVCLNSLRLILLSNSK >Mature_423_residues SPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVKVIQEISKRSNLLITTGGLGPTPDDL TTEAIAKSFNVNLFERPHLWDEIKQKLPNSKLQDDSSSLRKQCLFPKNAQIINNPRGTAPGMIWEPIEGFTILTFPGVPS EMKTMWEETACDFIKTKFSDNYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNHLEAKNI IQPVKEKLKKDFSKFIFGENDDTLPSVLIRELTERNQTIVFAESCTGGLLSSSLTSISGSSKVFKGSVVSYSNELKNSLL NISEEKLTKYGAVSEEVCESMAINAKEKLGADWAIAISGIAGPKGGSQDKPVGLVYISISGPNNHITNIKKLFNSTRNRV EIQTLSVNVCLNSLRLILLSNSK
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=334, Percent_Identity=31.1377245508982, Blast_Score=135, Evalue=6e-33, Organism=Escherichia coli, GI1789052, Length=151, Percent_Identity=40.3973509933775, Blast_Score=115, Evalue=4e-27, Organism=Escherichia coli, GI1787818, Length=122, Percent_Identity=37.7049180327869, Blast_Score=87, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71993974, Length=260, Percent_Identity=25, Blast_Score=73, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71993966, Length=260, Percent_Identity=25, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6323832, Length=167, Percent_Identity=28.7425149700599, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008136 - InterPro: IPR008135 - InterPro: IPR001453 [H]
Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 46583; Mature: 46452
Theoretical pI: Translated: 8.56; Mature: 8.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVKVIQE CCCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ISKRSNLLITTGGLGPTPDDLTTEAIAKSFNVNLFERPHLWDEIKQKLPNSKLQDDSSSL HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCCCHHHH RKQCLFPKNAQIINNPRGTAPGMIWEPIEGFTILTFPGVPSEMKTMWEETACDFIKTKFS HHHHCCCCCCCEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC DNYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNHLEAKN CCHHHHHHCHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH IIQPVKEKLKKDFSKFIFGENDDTLPSVLIRELTERNQTIVFAESCTGGLLSSSLTSISG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC SSKVFKGSVVSYSNELKNSLLNISEEKLTKYGAVSEEVCESMAINAKEKLGADWAIAISG CCCEEECHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCEEEEEEC IAGPKGGSQDKPVGLVYISISGPNNHITNIKKLFNSTRNRVEIQTLSVNVCLNSLRLILL CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHCCEEEEEE SNSK ECCC >Mature Secondary Structure SPNSKGVEILSIGTELLLGNIINTNAQWISEQLSQLGLNHFRQSTVGDNCDRIVKVIQE CCCCCCEEEEEECHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH ISKRSNLLITTGGLGPTPDDLTTEAIAKSFNVNLFERPHLWDEIKQKLPNSKLQDDSSSL HHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCCCHHHH RKQCLFPKNAQIINNPRGTAPGMIWEPIEGFTILTFPGVPSEMKTMWEETACDFIKTKFS HHHHCCCCCCCEECCCCCCCCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCC DNYSFFSNTLKFAGIGESSVAEKINDLLNLKNPTVAPYANLGEVKLRITARAKNHLEAKN CCHHHHHHCHHEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHH IIQPVKEKLKKDFSKFIFGENDDTLPSVLIRELTERNQTIVFAESCTGGLLSSSLTSISG HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCC SSKVFKGSVVSYSNELKNSLLNISEEKLTKYGAVSEEVCESMAINAKEKLGADWAIAISG CCCEEECHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHCCCHHHHCCCEEEEEEC IAGPKGGSQDKPVGLVYISISGPNNHITNIKKLFNSTRNRVEIQTLSVNVCLNSLRLILL CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEEHHHHHCCEEEEEE SNSK ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA