| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967728
Identifier: 123967728
GI number: 123967728
Start: 177003
End: 177455
Strand: Direct
Name: 123967728
Synonym: A9601_01911
Alternate gene names: NA
Gene position: 177003-177455 (Clockwise)
Preceding gene: 123967727
Following gene: 123967732
Centisome position: 10.6
GC content: 30.24
Gene sequence:
>453_bases ATGAAACCCGCTGACTGGTTAATATTGCAGAAGAAGGTAAGATTTGGTGATTGTGATTCTGCAGGTGTAATTCATTTTCA TAACTTATTAAAATGGTCGCATGAAGCTTGGGAAGAAAGTATTGAAATTTATGGGATTCCTTCTCAAGATATTTTCCCAG ATTTTTCTATACGTAAAAGTCAAATTATTTTTCCAATAGTAAATTGTGAAGCAAACTTTCTTGCGCCTATAAAAATTGGA GATTTATTAAAAGTAAAAATCGTCCCTCATAAAATTAATACTCATTTGTTCCAAGTAAATAGCTTTTTTATAAAAAATGG AAATAAAGTAGCCGAAGGGAAAATTATACATTGTTCTTTAGACATTGATTCAAGAGATAAAATAGAACTTCCCGATCAGT TAGAAAGATGGATAGAGGCTTCTAATGTGAGTACAAATTTAAAAGAATGCTAA
Upstream 100 bases:
>100_bases ATTGCCTCATATTCTTAAAGGTGCCAAAATCGCTGATATTATGGCAATCCTTGGATCAATAGATGTCATTATGGGATCTG TTGATAGATAATTTCTTTAA
Downstream 100 bases:
>100_bases TTATTATTTTTTAAATTTATATTTTATTTTTTCTGTAATGCTATTTTTGTTTTTAACAATCCACTTTTCAGGCCTTTCAT GTTTAGGCCAATTTTGAGAA
Product: thioesterase
Products: NA
Alternate protein names: DHNA-CoA hydrolase; DHNA-CoA thioesterase [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKPADWLILQKKVRFGDCDSAGVIHFHNLLKWSHEAWEESIEIYGIPSQDIFPDFSIRKSQIIFPIVNCEANFLAPIKIG DLLKVKIVPHKINTHLFQVNSFFIKNGNKVAEGKIIHCSLDIDSRDKIELPDQLERWIEASNVSTNLKEC
Sequences:
>Translated_150_residues MKPADWLILQKKVRFGDCDSAGVIHFHNLLKWSHEAWEESIEIYGIPSQDIFPDFSIRKSQIIFPIVNCEANFLAPIKIG DLLKVKIVPHKINTHLFQVNSFFIKNGNKVAEGKIIHCSLDIDSRDKIELPDQLERWIEASNVSTNLKEC >Mature_150_residues MKPADWLILQKKVRFGDCDSAGVIHFHNLLKWSHEAWEESIEIYGIPSQDIFPDFSIRKSQIIFPIVNCEANFLAPIKIG DLLKVKIVPHKINTHLFQVNSFFIKNGNKVAEGKIIHCSLDIDSRDKIELPDQLERWIEASNVSTNLKEC
Specific function: Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl- CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis [H]
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022829 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: =3.1.2.28 [H]
Molecular weight: Translated: 17240; Mature: 17240
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPADWLILQKKVRFGDCDSAGVIHFHNLLKWSHEAWEESIEIYGIPSQDIFPDFSIRKS CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCCCCC QIIFPIVNCEANFLAPIKIGDLLKVKIVPHKINTHLFQVNSFFIKNGNKVAEGKIIHCSL EEEEEEECCCCCEEEEEEECCEEEEEEECEECCCEEEEEEEEEEECCCEECCCEEEEEEE DIDSRDKIELPDQLERWIEASNVSTNLKEC CCCCCCCCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKPADWLILQKKVRFGDCDSAGVIHFHNLLKWSHEAWEESIEIYGIPSQDIFPDFSIRKS CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCCCCC QIIFPIVNCEANFLAPIKIGDLLKVKIVPHKINTHLFQVNSFFIKNGNKVAEGKIIHCSL EEEEEEECCCCCEEEEEEECCEEEEEEECEECCCEEEEEEEEEEECCCEECCCEEEEEEE DIDSRDKIELPDQLERWIEASNVSTNLKEC CCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA