| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is sui1 [C]
Identifier: 123967720
GI number: 123967720
Start: 170586
End: 170906
Strand: Direct
Name: sui1 [C]
Synonym: A9601_01831
Alternate gene names: 123967720
Gene position: 170586-170906 (Clockwise)
Preceding gene: 123967718
Following gene: 123967721
Centisome position: 10.22
GC content: 27.1
Gene sequence:
>321_bases TTGAAAATAATGGGAAAAAAGAATTGGATCGAATTTGATAATCAAGAAAAGAAATCTGAAGAAACAGCTAAGGTAGATAC TTTTAATAAAAGATCAAAAATAAATATTTCAAAACAAAAAAAAGGTAAAAAGGGCAAAACTATAACTTTAATTAGAGGTT TAGGCACTGAGGACGAAATTTTATTAAAAGAATTACTAAAAAAAATTAAAGTTTTTTGTGGGACTGGAGGAACATTAATT GATAGCAATATCCAGTTACAGGGTGATATGGTATCGAAATCAATTGAGTTTCTTCGTAAAGAGGGATTTCAAAATTTATG A
Upstream 100 bases:
>100_bases AGGGTTGATTTAAATCGTCATTTTTATAGTTTTGATCTTTGCGAGAAAATGTACTTACCACTTTTTCTATAGAATAAGTA TTAACTAACTATAGATTATA
Downstream 100 bases:
>100_bases AGCAAGGGTTAGGATAGGTTTCTAATTTTGATGAAGTAAAAAATGAAAGAACAAGATCAAACAAAGTCAACCAATATAAA GTGGCACAACTTAACTATTG
Product: translation initiation factor SUI1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 106
Protein sequence:
>106_residues MKIMGKKNWIEFDNQEKKSEETAKVDTFNKRSKINISKQKKGKKGKTITLIRGLGTEDEILLKELLKKIKVFCGTGGTLI DSNIQLQGDMVSKSIEFLRKEGFQNL
Sequences:
>Translated_106_residues MKIMGKKNWIEFDNQEKKSEETAKVDTFNKRSKINISKQKKGKKGKTITLIRGLGTEDEILLKELLKKIKVFCGTGGTLI DSNIQLQGDMVSKSIEFLRKEGFQNL >Mature_106_residues MKIMGKKNWIEFDNQEKKSEETAKVDTFNKRSKINISKQKKGKKGKTITLIRGLGTEDEILLKELLKKIKVFCGTGGTLI DSNIQLQGDMVSKSIEFLRKEGFQNL
Specific function: Unknown
COG id: COG0023
COG function: function code J; Translation initiation factor 1 (eIF-1/SUI1) and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12077; Mature: 12077
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS50296 SUI1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIMGKKNWIEFDNQEKKSEETAKVDTFNKRSKINISKQKKGKKGKTITLIRGLGTEDEI CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCHHH LLKELLKKIKVFCGTGGTLIDSNIQLQGDMVSKSIEFLRKEGFQNL HHHHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MKIMGKKNWIEFDNQEKKSEETAKVDTFNKRSKINISKQKKGKKGKTITLIRGLGTEDEI CCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHCCCCCCCEEEEEECCCCCHHH LLKELLKKIKVFCGTGGTLIDSNIQLQGDMVSKSIEFLRKEGFQNL HHHHHHHHHHHHHCCCCEEECCCEEECHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA