| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is pspE [C]
Identifier: 123967718
GI number: 123967718
Start: 168951
End: 169301
Strand: Direct
Name: pspE [C]
Synonym: A9601_01811
Alternate gene names: 123967718
Gene position: 168951-169301 (Clockwise)
Preceding gene: 123967708
Following gene: 123967720
Centisome position: 10.12
GC content: 33.05
Gene sequence:
>351_bases TTGGGAATTTATCCAAAATCTATAAATGCTTCTAGTCTCAATGATTGGTTTAATTCTGAGAAAGAAGATCCAGTTTTGAT TGATGTAAGAGAACAGTCAGAGCTTGAAATAGCTCGCTTCTCAAAAGAATTTTTACATATACCAATTAGTAAAGTCACAT CTGAATATGTTGAAGAAATATTTGCTGGTTTATTAGACAGAGAAATTGTAGTTACTTGTCATGCAGGAATAAGGAGTTAT AACTTTTCACAATGGTGCTTGGATAATAATATTGTGAGCGAAATATGGAATTTGGAGGAGGGTATTGATGGATGGAGTAG ATATATTGACCCATCAATCCCAAGGTATTGA
Upstream 100 bases:
>100_bases CTAAGTTTCATTATCAATGTTTATTTTTATTTTTAACAATAAATTTCCTACTGCAACTTAATTTATTAAATTGTAAATAA CACATAATTTATCCTATAAA
Downstream 100 bases:
>100_bases TTAAATATCTAATGAAGATGCAACAGTATTAACATCTTTGTCGCCTCTACCAGAGCAATTGATTACTATATTAGTATCTT TTTCAAGAGTAGGGCATAAT
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese-Related Sulfurtransferase; Rhodanese Domain Protein; Molybdopterin Biosynthesis MoeB Protein
Number of amino acids: Translated: 116; Mature: 115
Protein sequence:
>116_residues MGIYPKSINASSLNDWFNSEKEDPVLIDVREQSELEIARFSKEFLHIPISKVTSEYVEEIFAGLLDREIVVTCHAGIRSY NFSQWCLDNNIVSEIWNLEEGIDGWSRYIDPSIPRY
Sequences:
>Translated_116_residues MGIYPKSINASSLNDWFNSEKEDPVLIDVREQSELEIARFSKEFLHIPISKVTSEYVEEIFAGLLDREIVVTCHAGIRSY NFSQWCLDNNIVSEIWNLEEGIDGWSRYIDPSIPRY >Mature_115_residues GIYPKSINASSLNDWFNSEKEDPVLIDVREQSELEIARFSKEFLHIPISKVTSEYVEEIFAGLLDREIVVTCHAGIRSYN FSQWCLDNNIVSEIWNLEEGIDGWSRYIDPSIPRY
Specific function: Unknown. [C]
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13488; Mature: 13357
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIYPKSINASSLNDWFNSEKEDPVLIDVREQSELEIARFSKEFLHIPISKVTSEYVEEI CCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH FAGLLDREIVVTCHAGIRSYNFSQWCLDNNIVSEIWNLEEGIDGWSRYIDPSIPRY HHHHHCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCC >Mature Secondary Structure GIYPKSINASSLNDWFNSEKEDPVLIDVREQSELEIARFSKEFLHIPISKVTSEYVEEI CCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHH FAGLLDREIVVTCHAGIRSYNFSQWCLDNNIVSEIWNLEEGIDGWSRYIDPSIPRY HHHHHCCCEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA