| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is aroK [H]
Identifier: 123967661
GI number: 123967661
Start: 121889
End: 122446
Strand: Direct
Name: aroK [H]
Synonym: A9601_01241
Alternate gene names: 123967661
Gene position: 121889-122446 (Clockwise)
Preceding gene: 123967655
Following gene: 123967663
Centisome position: 7.3
GC content: 29.03
Gene sequence:
>558_bases ATGGAACAAACCATTATCAAAAAAACAGTTCTTACTTTAAAGGGCAGAAGCATATTTTTAATAGGAATGATGGGTTCAGG CAAGTCAAAAACTGGTTTGAAGTTGGCTGAATTATTGAAGTATAAATACATTGATTTAGATTCATTAATAGAGAAGTTGG CAAAAAAATCTATTAATCAAATTTTTAATGATGAAGGAGAAGAGAAATTCCGTGAATTAGAAGCAAACTGCCTTAAAGAA ACTATCAAAATTCCTTCATTAGTAATCTCAACTGGGGGAGGAATAGTTACCAAATCGGAAAACTGGGGAATCTTAAGACA GGGAATAATTGCTTGGATAGATCTAGACAAAGATATAGCAATTGAAAGATTGAAAAATGAAATTGAAAATAGACCACTTC TTCAGGGAAAGAATCTAAATGATTTATATATGAGCATTTTTCAATCTAGAGAAAATTTGTATTCTCAAGCAGATTTAAGA ATTCAAGTAAAAAGGGAAAATATTGAAGAAGTAGCTATGAAAATAATTAATGCAATTCATAAAGAAATAATTAGTTAA
Upstream 100 bases:
>100_bases ACGCATTCACGTCCTTTTCCATGTAATGGTTTGGATTGTGTAGAAGTCATACCTTTCTGCGATAATACTATCTTAAGGTT TTAAATACGCTTTTGTCTTT
Downstream 100 bases:
>100_bases TCTGGTTCAATTCTTACTGCAAACCATTTGATAACGTATCCTAATTTTATTTCTAATTCATAAGTGCTTTCTAATAATTC TTCAAAAAATTCCTGATCAG
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MEQTIIKKTVLTLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRELEANCLKE TIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIENRPLLQGKNLNDLYMSIFQSRENLYSQADLR IQVKRENIEEVAMKIINAIHKEIIS
Sequences:
>Translated_185_residues MEQTIIKKTVLTLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRELEANCLKE TIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIENRPLLQGKNLNDLYMSIFQSRENLYSQADLR IQVKRENIEEVAMKIINAIHKEIIS >Mature_185_residues MEQTIIKKTVLTLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQIFNDEGEEKFRELEANCLKE TIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIAIERLKNEIENRPLLQGKNLNDLYMSIFQSRENLYSQADLR IQVKRENIEEVAMKIINAIHKEIIS
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=165, Percent_Identity=31.5151515151515, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786587, Length=144, Percent_Identity=30.5555555555556, Blast_Score=76, Evalue=1e-15,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 21107; Mature: 21107
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTIIKKTVLTLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQ CCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IFNDEGEEKFRELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIA HHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEECCCCCCHHHHHHHHEEECCHHHH IERLKNEIENRPLLQGKNLNDLYMSIFQSRENLYSQADLRIQVKRENIEEVAMKIINAIH HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH KEIIS HHHCC >Mature Secondary Structure MEQTIIKKTVLTLKGRSIFLIGMMGSGKSKTGLKLAELLKYKYIDLDSLIEKLAKKSINQ CCCHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH IFNDEGEEKFRELEANCLKETIKIPSLVISTGGGIVTKSENWGILRQGIIAWIDLDKDIA HHCCCHHHHHHHHHHHHHHHHHHCCHHEEECCCCEEECCCCCCHHHHHHHHEEECCHHHH IERLKNEIENRPLLQGKNLNDLYMSIFQSRENLYSQADLRIQVKRENIEEVAMKIINAIH HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHH KEIIS HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA