| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967651
Identifier: 123967651
GI number: 123967651
Start: 112098
End: 113477
Strand: Reverse
Name: 123967651
Synonym: A9601_01141
Alternate gene names: NA
Gene position: 113477-112098 (Counterclockwise)
Preceding gene: 123967654
Following gene: 123967650
Centisome position: 6.8
GC content: 30.22
Gene sequence:
>1380_bases GTGTGGCAAGAAATTAATTACAAAGAAGATCCCGCTGACCTTTTGGTTCCTGATATTACTTATAAAATAAACCCTGCAGA AATTGAAAGTATTGAAGCTAATTCTATTGCTGAAGAAATAGGTTTTGAATCAGGTGATTCAATTATTAGTATTAACGGGA AAAAGCCAAGAGATTTAATTGATTATCAGATTCTGATTAGTGAAGAAATTTTAGACATATCAGTTTTAGATAAAAATCAT GGGATTCACAATATAAATATTGAAAAAGATCAAGACGTTAATTTAGGTTTAAATTTTAAAGATGCATTATTTGATTCAAT CAAGCAATGCAATAATAGATGTCCATTTTGTTTTATTGATCAACAGCCAAGTGGTAAAAGAAAAAGCCTTTATATAAAAG ATGATGATTATAGATTAAGTTTCCTATATGGCTCTTATTTAACTCTCACGAATTTGAAAAAAGAAGACTGGGAAAGAATT GCTATGCAAAAACTATCCCCACTTTTTATTTCAGTTCATGCTACTGATCCGGCCACAAGAGAAAAATTATTAAAAAATAA AAAAGCAGGAGTGATACTTGATCAAATTTCGTGGTTTGAAAAAAACTCTATTCAAATACATGCTCAAATTGTTGTTTGTC CAGATATAAATGATGGGGATATTCTTGAGAAATCAATTTTGGAACTTGCTGAATTCTACAAAAAAACCTCTCAAACAGTA CTTTCAGTAGCAATAGTTCCTGTAGGACTTACAAAATTTAGACCTGAAAATGATGGCTTAAAATCAATAAGCCCAGAATA CGCCAAAAAAACTATTAAAAAAGTAGAGAGAATTCAAGCCTCTCTACAAAATACTCTTGGAACTCGTTTTTGTTGGCTAG CAGACGAATGGTATTTAATTGCCGGTACAAATTTACCTAGTTACAAAACCTACGAAAATATGCCACAAGAATCTAATGGA GTTGGGACTATTAGAAACTTTCTAGAAGCATTACGAGAGAAGACTCAAAACCTACCCCAAAAAGTAAAAAGGCCAAAAAA AGTTAGTTGGATTGTTGGTAAATTAGTTTATGAAGCCCTAATTCCTACAGTTAAGAAATTAAACTTAATTAATGGATTAA CAATTAAGTTATATGGTTTGCCAAGTATTTATTGGGGTCAAGATCAAGTTGTTACAGGTCTTCTTACTGGAGAAGATCTA ATTTACGGGCTGAAAAATAAGGATTTAGGAGAAGCTGTTTACATCCCCTCTATTATGTTAAAAATGAATACTGATTTATT TTTAGATGATAAAAATATTCAAGAAGTTGAGAATCAAATAAATACTAAAATTCACGTTCTTGATGATTCAAATGATATTA TTAATACTTTAATTGGTTAA
Upstream 100 bases:
>100_bases TAATTTCACACCTATATTTAGTTTTTTAAAAGTATTTAATACACTTTGAGTCATATATAAGTCTAGAATAAATATAAATA AGAGTATTGGGCCTTTAATT
Downstream 100 bases:
>100_bases TCGAATATTTTCGAAACTATAAAACATGCTTAGAAGAGTAATAAATCCTTTCTTATTATTTCCGCTTACTCTAAGTATGA ATACCTTTAGTATTCTATCG
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MWQEINYKEDPADLLVPDITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH GIHNINIEKDQDVNLGLNFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPATREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKTSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKKVERIQASLQNTLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKRPKKVSWIVGKLVYEALIPTVKKLNLINGLTIKLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKMNTDLFLDDKNIQEVENQINTKIHVLDDSNDIINTLIG
Sequences:
>Translated_459_residues MWQEINYKEDPADLLVPDITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH GIHNINIEKDQDVNLGLNFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPATREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKTSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKKVERIQASLQNTLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKRPKKVSWIVGKLVYEALIPTVKKLNLINGLTIKLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKMNTDLFLDDKNIQEVENQINTKIHVLDDSNDIINTLIG >Mature_459_residues MWQEINYKEDPADLLVPDITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKNH GIHNINIEKDQDVNLGLNFKDALFDSIKQCNNRCPFCFIDQQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERI AMQKLSPLFISVHATDPATREKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKTSQTV LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKKVERIQASLQNTLGTRFCWLADEWYLIAGTNLPSYKTYENMPQESNG VGTIRNFLEALREKTQNLPQKVKRPKKVSWIVGKLVYEALIPTVKKLNLINGLTIKLYGLPSIYWGQDQVVTGLLTGEDL IYGLKNKDLGEAVYIPSIMLKMNTDLFLDDKNIQEVENQINTKIHVLDDSNDIINTLIG
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52203; Mature: 52203
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQEINYKEDPADLLVPDITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCHHEECCCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKNHGIHNINIEKDQDVNLGLNFKDALFDSIKQCNNRCPFCFID CEEEEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPATR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHH EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKTSQTV HHHHHCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHE LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKKVERIQASLQNTLGTRFCWLADEWYLI EEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEE AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKRPKKVSWIVGKLVYEAL ECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH IPTVKKLNLINGLTIKLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEECCEEEE KMNTDLFLDDKNIQEVENQINTKIHVLDDSNDIINTLIG EECCCEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC >Mature Secondary Structure MWQEINYKEDPADLLVPDITYKINPAEIESIEANSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCHHEECCCEEEEECHHHHCCCCHHHHHHHHCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKNHGIHNINIEKDQDVNLGLNFKDALFDSIKQCNNRCPFCFID CEEEEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEC QQPSGKRKSLYIKDDDYRLSFLYGSYLTLTNLKKEDWERIAMQKLSPLFISVHATDPATR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHH EKLLKNKKAGVILDQISWFEKNSIQIHAQIVVCPDINDGDILEKSILELAEFYKKTSQTV HHHHHCCCCCEEEEHHHHCCCCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHE LSVAIVPVGLTKFRPENDGLKSISPEYAKKTIKKVERIQASLQNTLGTRFCWLADEWYLI EEEEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEE AGTNLPSYKTYENMPQESNGVGTIRNFLEALREKTQNLPQKVKRPKKVSWIVGKLVYEAL ECCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHH IPTVKKLNLINGLTIKLYGLPSIYWGQDQVVTGLLTGEDLIYGLKNKDLGEAVYIPSIML HHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEECCHHEEECCCCCCCCEEECCEEEE KMNTDLFLDDKNIQEVENQINTKIHVLDDSNDIINTLIG EECCCEEECCCCHHHHHHHHCCEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA