Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123967654

Identifier: 123967654

GI number: 123967654

Start: 116080

End: 117015

Strand: Reverse

Name: 123967654

Synonym: A9601_01171

Alternate gene names: NA

Gene position: 117015-116080 (Counterclockwise)

Preceding gene: 123967656

Following gene: 123967651

Centisome position: 7.01

GC content: 31.84

Gene sequence:

>936_bases
ATGGCCCTTAAGACTTTAAACAGAAGAAATAAAAAAGATTTGAAATGGCCGAAAATCATAATTGCAATTCTTAGCACTAT
AGGCATAGTTGATACAGGTTCAATTACTTTAAAAAACTGGGGAATATTTACTTCGCTTTCATGCCCAGGGATACAAAATG
GTTGTGAAACAGTTTTAAATAGTCCTTGGGGTACTTTATTTGAAAATAATAAAGTTAATATACCTCTCTCATTAGCTGGA
TTTATAACATATTTATCAATATTAATTATCACAATAATACTCTCGCTTAATTTAATTTCCCCAAAAGAAAAACTAAATAA
GTTTTTATGGTGGTTAGTATTTCTAATTTCTTGTGCTTCATCAACATTTAGCTTTTTATTGATAAATATAATGTTTTTTA
AAATTCAAGCATATTGCTTTTTTTGTATACTTTCAGCAATTTTATCGTTTTCTATCTTTATAATTTCTATTATTGGAGCA
AAGTTCGAGAGTAGAGAACCTATGATTTTTAGAGGTTTCATTGTAGCCATTAGTGTCCTGCTGGGGGGACTAATTTGGTC
AACAAACGTTGACCCCTCTAATGCTATTGATATTGCAAACCCCACTGAAAATGTATCCCCAATAATTTCCACCTCAAGCT
CCCCCCAGAAGGTAAAGTTTGCAAAATTTTTAAGTGAAAACAATATTGTTATGTATAGTGCATACTGGTGCCCGCATTGC
CACGATCAGAAACAATTATTTGGTAAGGAAGCAGTTAAAGAATTAAAAGTAGTTGAGTGTGCTAAAGATGGTAAAGATAA
TGAGTATGAGCTATGCCAAACAAAAGGAATAAGTGGATTTCCTTCTTGGGAAATCAATGGAGAAATTATTAGTGGTACGC
GTGACTTAAATGAATTAGCGACAAAAACCGACTATCATGGAGATCTTAATTTTTAA

Upstream 100 bases:

>100_bases
TAAAAAATAAGAATTAAAAGATTTAAACAGCATTTCGTATATAACTCTCATGCCAAGATAATATTAGGATAGATAATGTA
AATAACAAACCTTCTTTTTT

Downstream 100 bases:

>100_bases
TAAATCTTTTTTGAATTTTTTGATCTAACTGTTGTCTAGTATGGCATTCCCAATTTTTATCTTTATCAGGGAAATCATCT
CTATAATGCCCTCCTCTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MALKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGIFTSLSCPGIQNGCETVLNSPWGTLFENNKVNIPLSLAG
FITYLSILIITIILSLNLISPKEKLNKFLWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISIIGA
KFESREPMIFRGFIVAISVLLGGLIWSTNVDPSNAIDIANPTENVSPIISTSSSPQKVKFAKFLSENNIVMYSAYWCPHC
HDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRDLNELATKTDYHGDLNF

Sequences:

>Translated_311_residues
MALKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGIFTSLSCPGIQNGCETVLNSPWGTLFENNKVNIPLSLAG
FITYLSILIITIILSLNLISPKEKLNKFLWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISIIGA
KFESREPMIFRGFIVAISVLLGGLIWSTNVDPSNAIDIANPTENVSPIISTSSSPQKVKFAKFLSENNIVMYSAYWCPHC
HDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRDLNELATKTDYHGDLNF
>Mature_310_residues
ALKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGIFTSLSCPGIQNGCETVLNSPWGTLFENNKVNIPLSLAGF
ITYLSILIITIILSLNLISPKEKLNKFLWWLVFLISCASSTFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISIIGAK
FESREPMIFRGFIVAISVLLGGLIWSTNVDPSNAIDIANPTENVSPIISTSSSPQKVKFAKFLSENNIVMYSAYWCPHCH
DQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRDLNELATKTDYHGDLNF

Specific function: Unknown

COG id: COG4243

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34763; Mature: 34632

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGIFTSLSCPGIQNGCETVLN
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHC
SPWGTLFENNKVNIPLSLAGFITYLSILIITIILSLNLISPKEKLNKFLWWLVFLISCAS
CCCCHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
STFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISIIGAKFESREPMIFRGFIVAISVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGGLIWSTNVDPSNAIDIANPTENVSPIISTSSSPQKVKFAKFLSENNIVMYSAYWCPHC
HHHHHEECCCCCCCCEECCCCCCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC
HDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRDLNELA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
TKTDYHGDLNF
HCCCCCCCCCC
>Mature Secondary Structure 
ALKTLNRRNKKDLKWPKIIIAILSTIGIVDTGSITLKNWGIFTSLSCPGIQNGCETVLN
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCEEEECCCCCCCHHHHHHHC
SPWGTLFENNKVNIPLSLAGFITYLSILIITIILSLNLISPKEKLNKFLWWLVFLISCAS
CCCCHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
STFSFLLINIMFFKIQAYCFFCILSAILSFSIFIISIIGAKFESREPMIFRGFIVAISVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LGGLIWSTNVDPSNAIDIANPTENVSPIISTSSSPQKVKFAKFLSENNIVMYSAYWCPHC
HHHHHEECCCCCCCCEECCCCCCCCCCCEECCCCCCHHHHHHHHCCCCEEEEEEECCCCC
HDQKQLFGKEAVKELKVVECAKDGKDNEYELCQTKGISGFPSWEINGEIISGTRDLNELA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHH
TKTDYHGDLNF
HCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA