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The map label for this gene is sufB [C]

Identifier: 123967622

GI number: 123967622

Start: 88884

End: 90326

Strand: Reverse

Name: sufB [C]

Synonym: A9601_00851

Alternate gene names: 123967622

Gene position: 90326-88884 (Counterclockwise)

Preceding gene: 123967628

Following gene: 123967621

Centisome position: 5.41

GC content: 35.0

Gene sequence:

>1443_bases
ATGGTCAACGAAAATTTAGTTAAAGATGTAGTAAAAGAGCCTTACAAATATGGTTTCGTTACTGATATTGAAACTGAAAA
AATAGAAAAGGGATTAAATGAAGATATCATAAAATTAATTTCACAGAAAAAAGAAGAGCCTAAATTTCTTCTTGATTTCA
GATTAAAAGCCTTTAAAAGATGGCAAAAAATGAAAGAGCCTGATTGGGCAGCATTAGGATATAAAAAAATTGATTATCAA
GATATTATTTATTACTCTGCTCCAAAGCAAAAAGAGAAAATTTCTAGCTTAGATGAAGTTGATCCCAAACTTCTTGAGAC
TTTTGACAAATTAGGAATCCCCCTCACGGAGCAAAAAAAACTCACAAATGTAGCAGTAGATGCCGTCTTTGATAGTGTTT
CTATAGCCACAACTTTTAGAGAAGAACTTGCTGAACATGGAGTTATATTTTGCTCAATTAGTGAAGCAGTAAAAAATCAC
GCGGATTTGATTGAAAAATATTTAGGTACAGTAGTTCCAGCTAGTGATAATTATTTTGCAGCACTAAATTCTGCAGTTTT
TAGTGATGGTTCTTTTGTTTATATCCCAAAAGGTGTTACCTGCCCTATGGATCTATCTTCCTACTTCAGAATTAATAGTG
GAGATTCAGGACAATTCGAAAGAACATTAATCATTGCTGAAGAATCAAGTTCTGTAAGTTATCTAGAAGGTTGTACAGCT
CCAATGTTTGATACAAATACCCTACATGCAGCAGTTGTGGAGCTTATAGCATTAGACGACGCCTCAATAAAATATTCAAC
AGTGCAAAATTGGTATGCTGGTGATGAAGAAGGTATTGGTGGAATTTTTAATTTTGTCACCAAGAGAGGAAAATGTCTAG
GTAAGAGAAGTAAAATTAGCTGGTCTCAAGTTGAAACAGGGTCTGCAATTACATGGAAATATCCTAGCTGTCTTCTTTTA
GGGGAAGAATCTGTAGGAGAATTTTATTCAGTGGCTCTCACCAATAATCTTCAGCAAGCAGATACCGGCACAAAAATGAT
ACATATTGGTCCTAAGACCAAATCAACTATTGTTAGCAAAGGTATTAGTGCAGGTAACTCAAAAAATAGCTACAGGGGTC
TTGTCAAAATGGGAACAAAAGCTACAGGATCAAGAAATTACAGTCAATGTGATTCAATGTTAATAGGGGATCAAGCTTCT
GCAAATACATTCCCTTACATCAAATCTCAACAACCCAATTCTGAAATTGAGCATGAAGCAAGCACATGTAGAATCTCAGA
AGACCAACTTTTTTATCTCCAAAGCAGAGGTATAGAATTTGAGGAGGCAGTATCTATGATGGTCAGCGGTTTTTGCAGAG
ATGTATTTAATCAATTACCTATGGAATTTGCTGCTGAAGCAGATAAGTTACTGGCACTTAAACTAGAGGGATCAGTAGGT
TAA

Upstream 100 bases:

>100_bases
GACATTAATTTTTAGTTTTAATAAAGGAAAAAAACTCAATATTGGGGGTATCTTTCGTTAGAGTATATAAAGCTAATTGT
AATAAGTTATTTTTGATAAC

Downstream 100 bases:

>100_bases
TTAAACAATTTCTAAAGTGAAATGCAAAGTAAAATGAAAGAATCAGATCCAATTTTAGAAGTTGAAAATCTCTCTGCATC
TACTGATAATCTTCCAATTT

Product: cysteine desulfurase activator complex subunit SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKRWQKMKEPDWAALGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
ADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Sequences:

>Translated_480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKRWQKMKEPDWAALGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
ADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
>Mature_480_residues
MVNENLVKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKRWQKMKEPDWAALGYKKIDYQ
DIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKKLTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNH
ADLIEKYLGTVVPASDNYFAALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
PMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKISWSQVETGSAITWKYPSCLLL
GEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSKGISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQAS
ANTFPYIKSQQPNSEIEHEASTCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=479, Percent_Identity=57.6200417536534, Blast_Score=593, Evalue=1e-171,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53317; Mature: 53317

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNENLVKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKR
CCCHHHHHHHHHCCHHCCCEECCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
WQKMKEPDWAALGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHCCCCCCHHCCCEECCHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEA
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC
>Mature Secondary Structure
MVNENLVKDVVKEPYKYGFVTDIETEKIEKGLNEDIIKLISQKKEEPKFLLDFRLKAFKR
CCCHHHHHHHHHCCHHCCCEECCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHH
WQKMKEPDWAALGYKKIDYQDIIYYSAPKQKEKISSLDEVDPKLLETFDKLGIPLTEQKK
HHHCCCCCCHHCCCEECCHHHEEEECCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHH
LTNVAVDAVFDSVSIATTFREELAEHGVIFCSISEAVKNHADLIEKYLGTVVPASDNYFA
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCHHH
ALNSAVFSDGSFVYIPKGVTCPMDLSSYFRINSGDSGQFERTLIIAEESSSVSYLEGCTA
HHHHHHCCCCCEEEECCCCCCCCCCHHHEEECCCCCCCEEEEEEEEECCCCCHHHHCCCC
PMFDTNTLHAAVVELIALDDASIKYSTVQNWYAGDEEGIGGIFNFVTKRGKCLGKRSKIS
CCCCCCHHHHHHHHHHHCCCCCEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
WSQVETGSAITWKYPSCLLLGEESVGEFYSVALTNNLQQADTGTKMIHIGPKTKSTIVSK
HHHCCCCCEEEEECCCEEEECCCCCCHHEEEHHHCCCHHCCCCCEEEEECCCCHHHHHHH
GISAGNSKNSYRGLVKMGTKATGSRNYSQCDSMLIGDQASANTFPYIKSQQPNSEIEHEA
CCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHEEECCCCCCCCCCCCCCCCCCCHHHCCH
STCRISEDQLFYLQSRGIEFEEAVSMMVSGFCRDVFNQLPMEFAAEADKLLALKLEGSVG
HHEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]