| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967597
Identifier: 123967597
GI number: 123967597
Start: 63742
End: 65064
Strand: Reverse
Name: 123967597
Synonym: A9601_00601
Alternate gene names: NA
Gene position: 65064-63742 (Counterclockwise)
Preceding gene: 123967598
Following gene: 123967592
Centisome position: 3.9
GC content: 35.07
Gene sequence:
>1323_bases ATGAAAAAATTATTGGCATTTTCATTAATTAGTTCCTCGATATTTCTAGGAATCAATACACTAAATGCAGAAGAATATGA GGCCTTCGGAATAGATTATTCAGGAGATGCATCTATTGGAAATAGAGTATGGGGTGTTTTGGATGGTCAAAAAACACTAC TTAGTACAAAAGTGTTTGATAATAATGGTTGGACACCAGCAGAATCATATATAAACGCAAAAACTGGCGAGATAATGGTT AGAGGAGCAGGGACTAAATTTCATGCTTACAATTGGAAAACAGATACTTGGCGAGATATCTCAGATAATGGTAATTTTCA AAAGTATTTTGTAAAACCGATGTCAGTTGGAACAACTGCCGATAGTTCAATACAAATTGGAGCAGATGCTAATGATATTG ATGTTGTTGAAGATGGTTTGAATATTGATGGTGCTGCTGTTATTACTAAAAATACTGACGGATCAATTCAACTTGGAGCA GATGGTAATGATATAGATGTTGTTGAAGATGGTTTGAATATTGATGGTGCTGCTGTTATTACTAAAAATACTGACGGATC AATTCAACTTGGAGCAGATGGTAATGATATAGATGTCGTAGCAGATGGTTTGAACATTGATGGAACTGCTGTTATTACAA AAAATGCTGATGGCACAATCCAAATCGGAACAGATGAAAACGATATTGATATAACTTCAGAGGGACTTGCAATTGATGGA GAACCATTAATTACCAAGAAAGCAAATGGAGAATTACATATTGGTAAGAACTCATGGATAACAAAAGAAGAAAATGGAAG ACAAAAAGTTTATGCGAAAGATGCCAATGGAAATCCAATTCCTATCGATTACACAAATGGGACCAAGTTACTTATTAATG GAAGAGATGTAGAACAGTCAATCAATAATGTTGGTGCTTTAAGTGCCGCCCTAACAGGATTGCCCACAGTTCCTACAGAT ACAACCCTTGCTTGCGGATTAGGAACTGGAACTCATGGAGGTGATTTTGCTTTTTCTGGTGGCTGTGCTTCTAAAGTTAA TGACAAATTATCAATTAACTATGCGGCGTCAATGACAATGCCAGGTCAAGATTATGCCGGTGATTTTGAAGATACTTTTT CCGCTAGAGCAGGATTTGTTTGGAAATTAGGTAAGGCCACAAAACCTATTCAAATTAGTATGAATGAAAAAGAGAATTTC GAAACAAAAATCAAAACTCTAGAAGAAAAAAATAAACAACTCTTAGCAAGGCTAGAAAGATTAGAAAAAGTCGCACTTGG AGATCTTAAATCAAAAGATTTAGCAGTTTATAAACTCAAATAA
Upstream 100 bases:
>100_bases TCCAAATAAAAATGGTGCATTTACTGATGAAAAGAAGGATATATATAGCACAACCAAAAATGCAAAATAAACTAAAAGTA TAAAAACTAGTCAAAATCTC
Downstream 100 bases:
>100_bases TTAATTTACTGGTTTATTACCGGTTTATGAATTTTTAGAAACGCTGAGATCGCTTGCCCTGCAATGGATCTCAACTAAGT AGTATACTCGCTATTGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKKLLAFSLISSSIFLGINTLNAEEYEAFGIDYSGDASIGNRVWGVLDGQKTLLSTKVFDNNGWTPAESYINAKTGEIMV RGAGTKFHAYNWKTDTWRDISDNGNFQKYFVKPMSVGTTADSSIQIGADANDIDVVEDGLNIDGAAVITKNTDGSIQLGA DGNDIDVVEDGLNIDGAAVITKNTDGSIQLGADGNDIDVVADGLNIDGTAVITKNADGTIQIGTDENDIDITSEGLAIDG EPLITKKANGELHIGKNSWITKEENGRQKVYAKDANGNPIPIDYTNGTKLLINGRDVEQSINNVGALSAALTGLPTVPTD TTLACGLGTGTHGGDFAFSGGCASKVNDKLSINYAASMTMPGQDYAGDFEDTFSARAGFVWKLGKATKPIQISMNEKENF ETKIKTLEEKNKQLLARLERLEKVALGDLKSKDLAVYKLK
Sequences:
>Translated_440_residues MKKLLAFSLISSSIFLGINTLNAEEYEAFGIDYSGDASIGNRVWGVLDGQKTLLSTKVFDNNGWTPAESYINAKTGEIMV RGAGTKFHAYNWKTDTWRDISDNGNFQKYFVKPMSVGTTADSSIQIGADANDIDVVEDGLNIDGAAVITKNTDGSIQLGA DGNDIDVVEDGLNIDGAAVITKNTDGSIQLGADGNDIDVVADGLNIDGTAVITKNADGTIQIGTDENDIDITSEGLAIDG EPLITKKANGELHIGKNSWITKEENGRQKVYAKDANGNPIPIDYTNGTKLLINGRDVEQSINNVGALSAALTGLPTVPTD TTLACGLGTGTHGGDFAFSGGCASKVNDKLSINYAASMTMPGQDYAGDFEDTFSARAGFVWKLGKATKPIQISMNEKENF ETKIKTLEEKNKQLLARLERLEKVALGDLKSKDLAVYKLK >Mature_440_residues MKKLLAFSLISSSIFLGINTLNAEEYEAFGIDYSGDASIGNRVWGVLDGQKTLLSTKVFDNNGWTPAESYINAKTGEIMV RGAGTKFHAYNWKTDTWRDISDNGNFQKYFVKPMSVGTTADSSIQIGADANDIDVVEDGLNIDGAAVITKNTDGSIQLGA DGNDIDVVEDGLNIDGAAVITKNTDGSIQLGADGNDIDVVADGLNIDGTAVITKNADGTIQIGTDENDIDITSEGLAIDG EPLITKKANGELHIGKNSWITKEENGRQKVYAKDANGNPIPIDYTNGTKLLINGRDVEQSINNVGALSAALTGLPTVPTD TTLACGLGTGTHGGDFAFSGGCASKVNDKLSINYAASMTMPGQDYAGDFEDTFSARAGFVWKLGKATKPIQISMNEKENF ETKIKTLEEKNKQLLARLERLEKVALGDLKSKDLAVYKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46899; Mature: 46899
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLAFSLISSSIFLGINTLNAEEYEAFGIDYSGDASIGNRVWGVLDGQKTLLSTKVFD CCHHHHHHHHHCEEEEEEEECCCCHHEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEEC NNGWTPAESYINAKTGEIMVRGAGTKFHAYNWKTDTWRDISDNGNFQKYFVKPMSVGTTA CCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCC DSSIQIGADANDIDVVEDGLNIDGAAVITKNTDGSIQLGADGNDIDVVEDGLNIDGAAVI CCCEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCCEEEE TKNTDGSIQLGADGNDIDVVADGLNIDGTAVITKNADGTIQIGTDENDIDITSEGLAIDG EECCCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCEEECCCEEECC EPLITKKANGELHIGKNSWITKEENGRQKVYAKDANGNPIPIDYTNGTKLLINGRDVEQS CCEEEEECCCEEEECCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCHHHH INNVGALSAALTGLPTVPTDTTLACGLGTGTHGGDFAFSGGCASKVNDKLSINYAASMTM HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHCCCCEEEEEEEEEEEC PGQDYAGDFEDTFSARAGFVWKLGKATKPIQISMNEKENFETKIKTLEEKNKQLLARLER CCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LEKVALGDLKSKDLAVYKLK HHHHHHCCCCCCCEEEEEEC >Mature Secondary Structure MKKLLAFSLISSSIFLGINTLNAEEYEAFGIDYSGDASIGNRVWGVLDGQKTLLSTKVFD CCHHHHHHHHHCEEEEEEEECCCCHHEEECCCCCCCCCCCCEEEEEECCCEEEEEEEEEC NNGWTPAESYINAKTGEIMVRGAGTKFHAYNWKTDTWRDISDNGNFQKYFVKPMSVGTTA CCCCCHHHHHCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCC DSSIQIGADANDIDVVEDGLNIDGAAVITKNTDGSIQLGADGNDIDVVEDGLNIDGAAVI CCCEEECCCCCCCEEEECCCCCCCEEEEEECCCCCEEECCCCCCEEEEECCCCCCCEEEE TKNTDGSIQLGADGNDIDVVADGLNIDGTAVITKNADGTIQIGTDENDIDITSEGLAIDG EECCCCCEEECCCCCEEEEEECCCCCCCEEEEEECCCCEEEECCCCCCCEEECCCEEECC EPLITKKANGELHIGKNSWITKEENGRQKVYAKDANGNPIPIDYTNGTKLLINGRDVEQS CCEEEEECCCEEEECCCCCEECCCCCCEEEEEECCCCCEEEEEECCCCEEEEECCCHHHH INNVGALSAALTGLPTVPTDTTLACGLGTGTHGGDFAFSGGCASKVNDKLSINYAASMTM HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHCCCCEEEEEEEEEEEC PGQDYAGDFEDTFSARAGFVWKLGKATKPIQISMNEKENFETKIKTLEEKNKQLLARLER CCCCCCCCHHHHHHCCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH LEKVALGDLKSKDLAVYKLK HHHHHHCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA