| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967598
Identifier: 123967598
GI number: 123967598
Start: 65495
End: 66166
Strand: Reverse
Name: 123967598
Synonym: A9601_00611
Alternate gene names: NA
Gene position: 66166-65495 (Counterclockwise)
Preceding gene: 123967600
Following gene: 123967597
Centisome position: 3.96
GC content: 39.88
Gene sequence:
>672_bases TTGTTCATTACCGTTTGCGGACAAAAAGGGGGGGTTGCCAAGACCTGTACAAGTATTCACCTTGCAAGTGTTTGGCACTC TGAAGGTAAAAAAGTTTGCATAGTGGATGCAGACAAGAATAGATCTGCTTTAGCATACGCATCAAGAGGCAATCTTCCAT TTCCAGTTTTCCCCGTCAGTTCAGCTGCTAAAGCATCAAGATCATCAGAAATTGTAATAACTGATGGCCAGGCTAGCAGT GATCAAGAAGAACTTAAACACTTAGCGTATGGTTCAGATTTAGTTATCTTGCCTACAACTGCAAAAGCAAGATCAGTAGA ATTAACTGTTGAACTAGCTAATTTATTAAGCAACTTAAAAGTTAACCATGCTGTAGTAATAGTAAAAGTTGATTTTAGAC AGCAAAAAGCAGCGCAACAAGCCAAAGCAGCTCTAGAAAATTATGGTTTATATGTTTTTGATACATTTATACCCTTACTC TCAGCATTTGATAAAGCAGAAGCCGCTGGCAATGCTGTATTTGAAGCTGTAGACGATTTAGGCAGATCAGATCCTCGTCG AATGACGGGCTGGTCTGCTTATTGTTCAATTGCCTCACAAATTCCATGCCTGATTTCGAAGCCCTCATCCGACACCAACA ACTTAAACAACCAACAACCAATAAGCGCTTAA
Upstream 100 bases:
>100_bases CTTTAAAATATTTCAAAAAATAAGTTTTAAAGCATTAAAAATCAGTTTCTCTTGACATTAAGAAATTATTCTCCAAAGTA AGAGAAATAAAAATAAAAAA
Downstream 100 bases:
>100_bases AAGTAGTTGATTCTCCTAATTTAGAAGAAGAAGAAAAAAAAGAAGAAGCAATAATTAGACAATCTGGATTATTAGTTAAT TTTTTTGGAGGTTTTATAGG
Product: chromosome partitioning ATPase protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MFITVCGQKGGVAKTCTSIHLASVWHSEGKKVCIVDADKNRSALAYASRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DQEELKHLAYGSDLVILPTTAKARSVELTVELANLLSNLKVNHAVVIVKVDFRQQKAAQQAKAALENYGLYVFDTFIPLL SAFDKAEAAGNAVFEAVDDLGRSDPRRMTGWSAYCSIASQIPCLISKPSSDTNNLNNQQPISA
Sequences:
>Translated_223_residues MFITVCGQKGGVAKTCTSIHLASVWHSEGKKVCIVDADKNRSALAYASRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DQEELKHLAYGSDLVILPTTAKARSVELTVELANLLSNLKVNHAVVIVKVDFRQQKAAQQAKAALENYGLYVFDTFIPLL SAFDKAEAAGNAVFEAVDDLGRSDPRRMTGWSAYCSIASQIPCLISKPSSDTNNLNNQQPISA >Mature_223_residues MFITVCGQKGGVAKTCTSIHLASVWHSEGKKVCIVDADKNRSALAYASRGNLPFPVFPVSSAAKASRSSEIVITDGQASS DQEELKHLAYGSDLVILPTTAKARSVELTVELANLLSNLKVNHAVVIVKVDFRQQKAAQQAKAALENYGLYVFDTFIPLL SAFDKAEAAGNAVFEAVDDLGRSDPRRMTGWSAYCSIASQIPCLISKPSSDTNNLNNQQPISA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23889; Mature: 23889
Theoretical pI: Translated: 7.88; Mature: 7.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITVCGQKGGVAKTCTSIHLASVWHSEGKKVCIVDADKNRSALAYASRGNLPFPVFPVS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEECC SAAKASRSSEIVITDGQASSDQEELKHLAYGSDLVILPTTAKARSVELTVELANLLSNLK HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCCC VNHAVVIVKVDFRQQKAAQQAKAALENYGLYVFDTFIPLLSAFDKAEAAGNAVFEAVDDL CCEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSDPRRMTGWSAYCSIASQIPCLISKPSSDTNNLNNQQPISA CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MFITVCGQKGGVAKTCTSIHLASVWHSEGKKVCIVDADKNRSALAYASRGNLPFPVFPVS CEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCEEEECC SAAKASRSSEIVITDGQASSDQEELKHLAYGSDLVILPTTAKARSVELTVELANLLSNLK HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHCCC VNHAVVIVKVDFRQQKAAQQAKAALENYGLYVFDTFIPLLSAFDKAEAAGNAVFEAVDDL CCEEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GRSDPRRMTGWSAYCSIASQIPCLISKPSSDTNNLNNQQPISA CCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA