| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967575
Identifier: 123967575
GI number: 123967575
Start: 38483
End: 39196
Strand: Direct
Name: 123967575
Synonym: A9601_00381
Alternate gene names: NA
Gene position: 38483-39196 (Clockwise)
Preceding gene: 123967573
Following gene: 123967576
Centisome position: 2.3
GC content: 29.13
Gene sequence:
>714_bases ATGAGCGAGATGATTAAATTAAGTCGATCTACTGTTGAGAAATATCTTAGTTGTCCAAGATGTTGTGTGCTTGACAAAAA ATATCAAATAAAGCCACCATCATTACCATTTACTTTAAATATAGCTGTTGATAGTTTATGCAAAAATGAATTTGATTACT ACAGAAAAATTCAGGAGCCGCATCCTTTATTGATTGAACATGGTATTGATGCTGTTCCTTTTAATCACAAAGACTTAGAA CGTTGGAGAAGTAATTTTAAAGGGATAAGATATAAGTCAATTGAACATAATTATGATTTTGGTGGAGCTGTGGATGATAT TTGGCAGAAAAAAAATGGTGATCTTATTATCGTTGATGTAAAAGCAACATCTAGAAATAATTTTGATTGGACTGAGACTT TTCATAAATACGAATATGCAAAAGCTTATAAGAGACAATTAGAGATGTATCAGTGGTTATTTAAAAAAAATGGTTTTCAA GTGGCTAAAGAAGCCTATCTTTTATATTTCAATGGAAAGAAAAATGAAAATTTATTTAATAACCAATTAAATTTTGAAGT ACATCTAATTAAATTAGATTGTTCTACTTCATGGGTAGAAAATAAAATAATTGATACGGTCAATTTATTACGTTCGGATA ATTTCCCGAAACCTTCTTTAACTTGCGAATACTGTAATTATTTAAAGAAGCGTTGGCAGTTATCCGTAACTTAA
Upstream 100 bases:
>100_bases TGGGTAGAACCTTTGAGTAGGAGTAAGTGAATAATTTTTCTAAAAAATTTAAGACCTTTATTTTATTGAAGAGATATTTT CAATTGGGATATTAATCGTA
Downstream 100 bases:
>100_bases TATTCATAGGATAATTTTTCATATTTCTGGAAAAATAGCGAATAAAAGATAATCTTTAATTAGATTATTAATTTATACTT TTGAAAAATTCTGAAAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSEMIKLSRSTVEKYLSCPRCCVLDKKYQIKPPSLPFTLNIAVDSLCKNEFDYYRKIQEPHPLLIEHGIDAVPFNHKDLE RWRSNFKGIRYKSIEHNYDFGGAVDDIWQKKNGDLIIVDVKATSRNNFDWTETFHKYEYAKAYKRQLEMYQWLFKKNGFQ VAKEAYLLYFNGKKNENLFNNQLNFEVHLIKLDCSTSWVENKIIDTVNLLRSDNFPKPSLTCEYCNYLKKRWQLSVT
Sequences:
>Translated_237_residues MSEMIKLSRSTVEKYLSCPRCCVLDKKYQIKPPSLPFTLNIAVDSLCKNEFDYYRKIQEPHPLLIEHGIDAVPFNHKDLE RWRSNFKGIRYKSIEHNYDFGGAVDDIWQKKNGDLIIVDVKATSRNNFDWTETFHKYEYAKAYKRQLEMYQWLFKKNGFQ VAKEAYLLYFNGKKNENLFNNQLNFEVHLIKLDCSTSWVENKIIDTVNLLRSDNFPKPSLTCEYCNYLKKRWQLSVT >Mature_236_residues SEMIKLSRSTVEKYLSCPRCCVLDKKYQIKPPSLPFTLNIAVDSLCKNEFDYYRKIQEPHPLLIEHGIDAVPFNHKDLER WRSNFKGIRYKSIEHNYDFGGAVDDIWQKKNGDLIIVDVKATSRNNFDWTETFHKYEYAKAYKRQLEMYQWLFKKNGFQV AKEAYLLYFNGKKNENLFNNQLNFEVHLIKLDCSTSWVENKIIDTVNLLRSDNFPKPSLTCEYCNYLKKRWQLSVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28255; Mature: 28123
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEMIKLSRSTVEKYLSCPRCCVLDKKYQIKPPSLPFTLNIAVDSLCKNEFDYYRKIQEP CCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC HPLLIEHGIDAVPFNHKDLERWRSNFKGIRYKSIEHNYDFGGAVDDIWQKKNGDLIIVDV CCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEEEE KATSRNNFDWTETFHKYEYAKAYKRQLEMYQWLFKKNGFQVAKEAYLLYFNGKKNENLFN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC NQLNFEVHLIKLDCSTSWVENKIIDTVNLLRSDNFPKPSLTCEYCNYLKKRWQLSVT CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCC >Mature Secondary Structure SEMIKLSRSTVEKYLSCPRCCVLDKKYQIKPPSLPFTLNIAVDSLCKNEFDYYRKIQEP CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCC HPLLIEHGIDAVPFNHKDLERWRSNFKGIRYKSIEHNYDFGGAVDDIWQKKNGDLIIVDV CCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHCCCCCEEEEEE KATSRNNFDWTETFHKYEYAKAYKRQLEMYQWLFKKNGFQVAKEAYLLYFNGKKNENLFN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCC NQLNFEVHLIKLDCSTSWVENKIIDTVNLLRSDNFPKPSLTCEYCNYLKKRWQLSVT CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA