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The map label for this gene is cbiD [H]

Identifier: 123967572

GI number: 123967572

Start: 33636

End: 34724

Strand: Direct

Name: cbiD [H]

Synonym: A9601_00351

Alternate gene names: 123967572

Gene position: 33636-34724 (Clockwise)

Preceding gene: 123967570

Following gene: 123967573

Centisome position: 2.01

GC content: 28.56

Gene sequence:

>1089_bases
TTGTGGGTTGCTGGAGCTGCTAGGTCAGCATTAAAAAAACTAGTAGGGTTACCATTTGAGAATTATGAACTAATAAAAAT
TCCAAATGAAAATAAAGAAATAAAAATCGAAATTCATTCTGTTGGTTTACTTAAAGATGATTCACAAGTATTAGGAATTA
CCTTTGCAAAGTCAGGCTTAGATCTTGACATTACGCAAAACTTAGAAATATGGACAATAGTCTCTTTAGAAAAAATTTCT
TTCGATAATCCTGTTCAAACAATTCCAATAAATATTATTGCAGGATCTGGTGTAGGTATAAAAGAAGATACATCAGAGAT
ATGTATTTCTAATTTTGCCAAAGAAGTTTTATATGTAAATTTATTAGATATCCTTCCTGAAGGCTTTAATTTGAAATTAG
AAATTATTTTCCCAAAGGGTGCATTTTTAGCTGAAAGAACGAGTAATAAGTCATTTGGTATTGTTGATGGATTATCTATT
ATTGGTACTTCTGCTGAGACTTATTCGAGTGCTTCACCTGATCAATTAGAAGAGGCTAAAACTAATCTAGTAAAGTTAAT
ACAAAATGATTTTAGAGGAGAAGTTGTTTTTGTTATTGGTGAAAATGGGTTAAATTTAGCTAAAACTTATAATATTAATT
TGCCAATTATCAAAATTGGAAATTGGATAGGACCATTATTAGTTTATGCTGCAATAAAAAAAGTTAAAACTGTAATTCTT
TTTGGTTATCACGGAAAATTAATTAAGTTAGCAGGTGGTATTTTTCATACACATAATCATTTAGCTGATGCAAGAATTGA
GATTCTTGTTTATTTAGCTGTTCAAGAGAAAGTACCACCTGGAATAATAGTTGAATTATCTCAATTAAATAATCTTGAGG
ATGCATTACTACTTCTTGAGAGATTTAATCAATCTTTAACTGATAAATTATTCAAGAGTTTATCAAATACTATTGAAAAG
CGTTCTTTTACTTATGTAAATAGGTATGTAAAAACTGAAATGGAAATTGCCTCAATCATTTTTGATAGAAAAAGGAAAAT
AAGGTGGGCTGGAATTAACGGTAATAAGTATATTTCTTATTTTCAATGA

Upstream 100 bases:

>100_bases
TTTGTTGTATGGCCACTTTTTGATAAATAGGTCATTCTTAGATTAGTTCTCATTATATATTTTTCAATTACTTGATTTGA
AAAAAGGATTTTCTTTACCT

Downstream 100 bases:

>100_bases
GATTAACTTTGATTCATTATGCTTTTGTAAATAAATTGAGCTAACTTTTATACATGAGTCAAACATCTTTAAAAAAAGAA
CGAGATCCTTCAATATTAAT

Product: cobalt-precorrin-6A synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MWVAGAARSALKKLVGLPFENYELIKIPNENKEIKIEIHSVGLLKDDSQVLGITFAKSGLDLDITQNLEIWTIVSLEKIS
FDNPVQTIPINIIAGSGVGIKEDTSEICISNFAKEVLYVNLLDILPEGFNLKLEIIFPKGAFLAERTSNKSFGIVDGLSI
IGTSAETYSSASPDQLEEAKTNLVKLIQNDFRGEVVFVIGENGLNLAKTYNINLPIIKIGNWIGPLLVYAAIKKVKTVIL
FGYHGKLIKLAGGIFHTHNHLADARIEILVYLAVQEKVPPGIIVELSQLNNLEDALLLLERFNQSLTDKLFKSLSNTIEK
RSFTYVNRYVKTEMEIASIIFDRKRKIRWAGINGNKYISYFQ

Sequences:

>Translated_362_residues
MWVAGAARSALKKLVGLPFENYELIKIPNENKEIKIEIHSVGLLKDDSQVLGITFAKSGLDLDITQNLEIWTIVSLEKIS
FDNPVQTIPINIIAGSGVGIKEDTSEICISNFAKEVLYVNLLDILPEGFNLKLEIIFPKGAFLAERTSNKSFGIVDGLSI
IGTSAETYSSASPDQLEEAKTNLVKLIQNDFRGEVVFVIGENGLNLAKTYNINLPIIKIGNWIGPLLVYAAIKKVKTVIL
FGYHGKLIKLAGGIFHTHNHLADARIEILVYLAVQEKVPPGIIVELSQLNNLEDALLLLERFNQSLTDKLFKSLSNTIEK
RSFTYVNRYVKTEMEIASIIFDRKRKIRWAGINGNKYISYFQ
>Mature_362_residues
MWVAGAARSALKKLVGLPFENYELIKIPNENKEIKIEIHSVGLLKDDSQVLGITFAKSGLDLDITQNLEIWTIVSLEKIS
FDNPVQTIPINIIAGSGVGIKEDTSEICISNFAKEVLYVNLLDILPEGFNLKLEIIFPKGAFLAERTSNKSFGIVDGLSI
IGTSAETYSSASPDQLEEAKTNLVKLIQNDFRGEVVFVIGENGLNLAKTYNINLPIIKIGNWIGPLLVYAAIKKVKTVIL
FGYHGKLIKLAGGIFHTHNHLADARIEILVYLAVQEKVPPGIIVELSQLNNLEDALLLLERFNQSLTDKLFKSLSNTIEK
RSFTYVNRYVKTEMEIASIIFDRKRKIRWAGINGNKYISYFQ

Specific function: May catalyze the methylation of C-1 in cobalt-precorrin- 5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A [H]

COG id: COG1903

COG function: function code H; Cobalamin biosynthesis protein CbiD

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002748 [H]

Pfam domain/function: PF01888 CbiD [H]

EC number: NA

Molecular weight: Translated: 40410; Mature: 40410

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWVAGAARSALKKLVGLPFENYELIKIPNENKEIKIEIHSVGLLKDDSQVLGITFAKSGL
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCC
DLDITQNLEIWTIVSLEKISFDNPVQTIPINIIAGSGVGIKEDTSEICISNFAKEVLYVN
CEEEECCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LLDILPEGFNLKLEIIFPKGAFLAERTSNKSFGIVDGLSIIGTSAETYSSASPDQLEEAK
HHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCEECCHHHEECCCHHCCCCCCHHHHHHH
TNLVKLIQNDFRGEVVFVIGENGLNLAKTYNINLPIIKIGNWIGPLLVYAAIKKVKTVIL
HHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHEEEEE
FGYHGKLIKLAGGIFHTHNHLADARIEILVYLAVQEKVPPGIIVELSQLNNLEDALLLLE
EECCCCEEEECCCHHCCCCHHCCCEEEEEEEEEECCCCCCCEEEEEHHCCCHHHHHHHHH
RFNQSLTDKLFKSLSNTIEKRSFTYVNRYVKTEMEIASIIFDRKRKIRWAGINGNKYISY
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEE
FQ
EC
>Mature Secondary Structure
MWVAGAARSALKKLVGLPFENYELIKIPNENKEIKIEIHSVGLLKDDSQVLGITFAKSGL
CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEEEEEEECCCCEEEEEEECCCC
DLDITQNLEIWTIVSLEKISFDNPVQTIPINIIAGSGVGIKEDTSEICISNFAKEVLYVN
CEEEECCCEEEEEEEEEEECCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LLDILPEGFNLKLEIIFPKGAFLAERTSNKSFGIVDGLSIIGTSAETYSSASPDQLEEAK
HHHHCCCCCCEEEEEEECCCCEEEECCCCCCCCEECCHHHEECCCHHCCCCCCHHHHHHH
TNLVKLIQNDFRGEVVFVIGENGLNLAKTYNINLPIIKIGNWIGPLLVYAAIKKVKTVIL
HHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEECCHHHHHHHHHHHHHHEEEEE
FGYHGKLIKLAGGIFHTHNHLADARIEILVYLAVQEKVPPGIIVELSQLNNLEDALLLLE
EECCCCEEEECCCHHCCCCHHCCCEEEEEEEEEECCCCCCCEEEEEHHCCCHHHHHHHHH
RFNQSLTDKLFKSLSNTIEKRSFTYVNRYVKTEMEIASIIFDRKRKIRWAGINGNKYISY
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEE
FQ
EC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA