BacMap

Definition	Prochlorococcus marinus str. AS9601, complete genome.
Accession	NC_008816
Length	1,669,886

Click here to switch to the map view.

The map label for this gene is dnaJ [H]

Identifier: 123967553

GI number: 123967553

Start: 18974

End: 20098

Strand: Direct

Name: dnaJ [H]

Synonym: A9601_00161

Alternate gene names: 123967553

Gene position: 18974-20098 (Clockwise)

Preceding gene: 123967552

Following gene: 123967554

Centisome position: 1.14

GC content: 38.58

Gene sequence:

>1125_bases
ATGGCTGATTTCTATCAAATACTTGGAGTTTCAAGAGATGCTGATGCAGATACCTTAAAAAAGGCTTATAGAAAATTAGC
AAGACAATACCATCCTGATGTTAATAAAGAACCTGGTGCGGAAGATAAATTTAAAGAAATTGGTAAGGCTTACGAAGCAT
TAGCTGACCCTGAAACTAGAGCCAGGTATGACCAATTTGGAGAGGCTGGCCTTGGAGGCGCAGCTGGGATGCCTGATATG
GGAGACATGGGTGGATTTGCTGATCTATTTGAAACTTTTTTTAATGGATTTGGGGGGCAAAATCCACAGGGTGGAAGAAC
ACAAAGAAGAGGTCCTCAACAAGGAGATGATCTAAGGTATGACCTTAATGTTGAATTTAAAGATGCAATTTTTGGTCAAC
AAAGAGAAATTAAAATTCCTCATCTGGAAACATGTGAAGTCTGTAGGGGAACGGGTGCAAAACAAGGAACCGGACCCAAA
ACTTGCTCAACATGTGGTGGAAGTGGACAAGTTAGAAGAGCTACAAGAACACCTTTTGGTAATTTCACACAAGTAGCTGA
ATGTCCCTCATGTAATGGGGCTGGTCAGATAATTGCAGATCCATGTGTAAATTGCGGCGGTAATGGAGTGAAGCAAGTCA
GAAAAAAATTAAGAATTAATATACCTGCAGGAGTTGATACCGGTACTAAATTAAGAGTTTCCGGTGAGGGAAATGTTGGT
TTAAAAGGGGGCCCACCTGGAGATCTTTATGTCTTTATAAAGGTTAAGAATGATTCAAAACTTAAAAGAGATGGTGTAAC
TATTTACTCAGAAATAGCAGTGAGTTATTTACAGGCTATCTTAGGCGACACGGTTAAAATTACTACGGTTGATGGAGAAG
TTAATTTAAAAATTCCAAGTGGTACGCAGCCAAATACAACTCTTTCACTTGAGAATAAAGGGGTACCTAGGCTTGGTAAT
CCAGTTGCGAGAGGAAACCATGAAGTCTTAGTAAAAGTAAAATTACCAACTCGTATAACAGATGGAGAACGAGAGCTTTT
GGAGGGTTTAGCTTCTCAATATTCAGATAAAAATATTAATTCCACTAGTGGACTTTTTAGTAAATTATTTGGTAAAGATT
CTTAA

Upstream 100 bases:

>100_bases
AAGAGGAAGTAGAAAAGGATAAAGTTGAAGGGGATATTGATTCAGAGGAAAATACTTCTGAAGATGTATAAATTCCAAAT
TTTTACTTAAGCATTATCTA

Downstream 100 bases:

>100_bases
TGACTTCCTTAAAGCATTTGGATCTTAAATCTGTCCCATGTCCTTTAAATGTTGTCAAAATCAAATTGGCTTTGGAGAAG
TTATCCAAAAACGAACAACT

Product: chaperone protein DnaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MADFYQILGVSRDADADTLKKAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDM
GDMGGFADLFETFFNGFGGQNPQGGRTQRRGPQQGDDLRYDLNVEFKDAIFGQQREIKIPHLETCEVCRGTGAKQGTGPK
TCSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCVNCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVKITTVDGEVNLKIPSGTQPNTTLSLENKGVPRLGN
PVARGNHEVLVKVKLPTRITDGERELLEGLASQYSDKNINSTSGLFSKLFGKDS

Sequences:

>Translated_374_residues
MADFYQILGVSRDADADTLKKAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDM
GDMGGFADLFETFFNGFGGQNPQGGRTQRRGPQQGDDLRYDLNVEFKDAIFGQQREIKIPHLETCEVCRGTGAKQGTGPK
TCSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCVNCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVKITTVDGEVNLKIPSGTQPNTTLSLENKGVPRLGN
PVARGNHEVLVKVKLPTRITDGERELLEGLASQYSDKNINSTSGLFSKLFGKDS
>Mature_373_residues
ADFYQILGVSRDADADTLKKAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETRARYDQFGEAGLGGAAGMPDMG
DMGGFADLFETFFNGFGGQNPQGGRTQRRGPQQGDDLRYDLNVEFKDAIFGQQREIKIPHLETCEVCRGTGAKQGTGPKT
CSTCGGSGQVRRATRTPFGNFTQVAECPSCNGAGQIIADPCVNCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVGL
KGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVKITTVDGEVNLKIPSGTQPNTTLSLENKGVPRLGNP
VARGNHEVLVKVKLPTRITDGERELLEGLASQYSDKNINSTSGLFSKLFGKDS

Specific function: Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion. Unfolded proteins bind initially to dnaJ; upon

COG id: COG0484

COG function: function code O; DnaJ-class molecular chaperone with C-terminal Zn finger domain

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

Organism=Homo sapiens, GI205360838, Length=360, Percent_Identity=34.4444444444444, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI205360840, Length=360, Percent_Identity=34.4444444444444, Blast_Score=207, Evalue=9e-54,
Organism=Homo sapiens, GI5031741, Length=340, Percent_Identity=32.6470588235294, Blast_Score=152, Evalue=3e-37,
Organism=Homo sapiens, GI4504511, Length=361, Percent_Identity=30.4709141274238, Blast_Score=145, Evalue=6e-35,
Organism=Homo sapiens, GI7706495, Length=363, Percent_Identity=31.9559228650138, Blast_Score=134, Evalue=9e-32,
Organism=Homo sapiens, GI194328758, Length=294, Percent_Identity=31.6326530612245, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI194328760, Length=329, Percent_Identity=30.3951367781155, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI6631085, Length=354, Percent_Identity=30.225988700565, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI5453690, Length=361, Percent_Identity=29.0858725761773, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI201862518, Length=104, Percent_Identity=49.0384615384615, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI201862587, Length=104, Percent_Identity=49.0384615384615, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI56549115, Length=104, Percent_Identity=49.0384615384615, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI194328762, Length=290, Percent_Identity=27.5862068965517, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI56687498, Length=68, Percent_Identity=61.7647058823529, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI194306642, Length=101, Percent_Identity=49.5049504950495, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI194306640, Length=101, Percent_Identity=49.5049504950495, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI22749377, Length=109, Percent_Identity=44.954128440367, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI9558755, Length=112, Percent_Identity=42.8571428571429, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI47777312, Length=109, Percent_Identity=44.0366972477064, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI39204547, Length=160, Percent_Identity=33.125, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI27151736, Length=112, Percent_Identity=43.75, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI88501736, Length=112, Percent_Identity=43.75, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI72534740, Length=65, Percent_Identity=55.3846153846154, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI21553335, Length=102, Percent_Identity=41.1764705882353, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI217035105, Length=73, Percent_Identity=46.5753424657534, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI4885495, Length=68, Percent_Identity=50, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI68077168, Length=75, Percent_Identity=52, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI68077166, Length=75, Percent_Identity=52, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI17388799, Length=68, Percent_Identity=50, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI45504382, Length=69, Percent_Identity=49.2753623188406, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI23503241, Length=106, Percent_Identity=40.5660377358491, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI24308127, Length=75, Percent_Identity=44, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI21361912, Length=69, Percent_Identity=47.8260869565217, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI29126218, Length=77, Percent_Identity=44.1558441558442, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI1786197, Length=354, Percent_Identity=41.2429378531073, Blast_Score=261, Evalue=6e-71,
Organism=Escherichia coli, GI1787235, Length=357, Percent_Identity=26.6106442577031, Blast_Score=114, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17553096, Length=357, Percent_Identity=31.6526610644258, Blast_Score=167, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17553098, Length=357, Percent_Identity=30.812324929972, Blast_Score=166, Evalue=1e-41,
Organism=Caenorhabditis elegans, GI17507263, Length=356, Percent_Identity=32.3033707865169, Blast_Score=123, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI212645553, Length=356, Percent_Identity=28.0898876404494, Blast_Score=115, Evalue=3e-26,
Organism=Caenorhabditis elegans, GI17563890, Length=357, Percent_Identity=29.4117647058824, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17534355, Length=179, Percent_Identity=37.9888268156425, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI115532378, Length=70, Percent_Identity=55.7142857142857, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=50.7692307692308, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17554644, Length=97, Percent_Identity=40.2061855670103, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI86562985, Length=70, Percent_Identity=42.8571428571429, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538236, Length=110, Percent_Identity=35.4545454545455, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17568643, Length=70, Percent_Identity=47.1428571428571, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324265, Length=361, Percent_Identity=33.7950138504155, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6321094, Length=400, Percent_Identity=33.25, Blast_Score=145, Evalue=8e-36,
Organism=Saccharomyces cerevisiae, GI6323119, Length=383, Percent_Identity=27.9373368146214, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6323870, Length=309, Percent_Identity=31.0679611650485, Blast_Score=112, Evalue=1e-25,
Organism=Saccharomyces cerevisiae, GI6324252, Length=420, Percent_Identity=25.952380952381, Blast_Score=98, Evalue=3e-21,
Organism=Saccharomyces cerevisiae, GI6323813, Length=111, Percent_Identity=43.2432432432432, Blast_Score=77, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6322194, Length=98, Percent_Identity=40.8163265306122, Blast_Score=70, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6320888, Length=98, Percent_Identity=39.7959183673469, Blast_Score=69, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324321, Length=64, Percent_Identity=53.125, Blast_Score=67, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45552813, Length=378, Percent_Identity=30.4232804232804, Blast_Score=154, Evalue=9e-38,
Organism=Drosophila melanogaster, GI45549272, Length=378, Percent_Identity=30.4232804232804, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI45552811, Length=378, Percent_Identity=30.4232804232804, Blast_Score=153, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24646562, Length=347, Percent_Identity=31.9884726224784, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24646560, Length=347, Percent_Identity=31.9884726224784, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24646558, Length=347, Percent_Identity=31.9884726224784, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI24646556, Length=347, Percent_Identity=31.9884726224784, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI21357547, Length=347, Percent_Identity=31.9884726224784, Blast_Score=135, Evalue=6e-32,
Organism=Drosophila melanogaster, GI20129487, Length=345, Percent_Identity=31.8840579710145, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24584014, Length=345, Percent_Identity=31.8840579710145, Blast_Score=128, Evalue=5e-30,
Organism=Drosophila melanogaster, GI28574949, Length=362, Percent_Identity=26.7955801104972, Blast_Score=122, Evalue=6e-28,
Organism=Drosophila melanogaster, GI85726398, Length=373, Percent_Identity=28.4182305630027, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI19920464, Length=362, Percent_Identity=28.4530386740331, Blast_Score=109, Evalue=4e-24,
Organism=Drosophila melanogaster, GI24658562, Length=69, Percent_Identity=59.4202898550725, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24658555, Length=69, Percent_Identity=59.4202898550725, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI18858081, Length=353, Percent_Identity=26.628895184136, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24668492, Length=69, Percent_Identity=50.7246376811594, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI24654066, Length=121, Percent_Identity=38.0165289256198, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24654070, Length=121, Percent_Identity=38.0165289256198, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24654068, Length=121, Percent_Identity=38.0165289256198, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI24654072, Length=121, Percent_Identity=38.0165289256198, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=52.3076923076923, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI17737735, Length=69, Percent_Identity=47.8260869565217, Blast_Score=68, Evalue=9e-12,
Organism=Drosophila melanogaster, GI28574723, Length=69, Percent_Identity=47.8260869565217, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24668523, Length=69, Percent_Identity=47.8260869565217, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI19922238, Length=73, Percent_Identity=43.8356164383562, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17648033, Length=103, Percent_Identity=38.8349514563107, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24643995, Length=81, Percent_Identity=38.2716049382716, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24584630, Length=103, Percent_Identity=38.8349514563107, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012724
- InterPro:   IPR002939
- InterPro:   IPR001623
- InterPro:   IPR018253
- InterPro:   IPR008971
- InterPro:   IPR015609
- InterPro:   IPR003095
- InterPro:   IPR001305 [H]

Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C; PF00684 DnaJ_CXXCXGXG [H]

EC number: NA

Molecular weight: Translated: 40174; Mature: 40043

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2 ; PS00637 DNAJ_CXXCXGXG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFYQILGVSRDADADTLKKAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETR
CCCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARYDQFGEAGLGGAAGMPDMGDMGGFADLFETFFNGFGGQNPQGGRTQRRGPQQGDDLRY
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
DLNVEFKDAIFGQQREIKIPHLETCEVCRGTGAKQGTGPKTCSTCGGSGQVRRATRTPFG
EECCCHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCEEHHHCCCCC
NFTQVAECPSCNGAGQIIADPCVNCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
CCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCC
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVKITTVDGEVNLKIPS
CCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECC
GTQPNTTLSLENKGVPRLGNPVARGNHEVLVKVKLPTRITDGERELLEGLASQYSDKNIN
CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
STSGLFSKLFGKDS
HHHHHHHHHHCCCC
>Mature Secondary Structure 
ADFYQILGVSRDADADTLKKAYRKLARQYHPDVNKEPGAEDKFKEIGKAYEALADPETR
CCHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH
ARYDQFGEAGLGGAAGMPDMGDMGGFADLFETFFNGFGGQNPQGGRTQRRGPQQGDDLRY
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
DLNVEFKDAIFGQQREIKIPHLETCEVCRGTGAKQGTGPKTCSTCGGSGQVRRATRTPFG
EECCCHHHHHCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCHHCCCCCCCEEHHHCCCCC
NFTQVAECPSCNGAGQIIADPCVNCGGNGVKQVRKKLRINIPAGVDTGTKLRVSGEGNVG
CCHHHHCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCC
LKGGPPGDLYVFIKVKNDSKLKRDGVTIYSEIAVSYLQAILGDTVKITTVDGEVNLKIPS
CCCCCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECC
GTQPNTTLSLENKGVPRLGNPVARGNHEVLVKVKLPTRITDGERELLEGLASQYSDKNIN
CCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCC
STSGLFSKLFGKDS
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12917642 [H]