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The map label for this gene is msrB [H]

Identifier: 123967551

GI number: 123967551

Start: 17656

End: 18150

Strand: Direct

Name: msrB [H]

Synonym: A9601_00141

Alternate gene names: 123967551

Gene position: 17656-18150 (Clockwise)

Preceding gene: 123967549

Following gene: 123967552

Centisome position: 1.06

GC content: 34.95

Gene sequence:

>495_bases
ATGAATCAATTTCTATCAAGAAGAATTTTTATTTTAATTCCTACTATGTCAATCTTAAAGATATTCTTTAAACCTATGCA
AGTGTTAGCATCTTCACTTGCTTCTAAAGAAGCGTGGAATTTCTCAAGAGATGAATGGAAATCTAGGCTTAGTCCAGAAT
CTTATTATATTTTAAGGGAAGAAGGGACTGAAAGAGCTTTCAGTAGCCAATTAAATAATGAGAAAAGAAAAGGCATTTTT
CACTGTGCAGGTTGCGATTTGCCCCTTTTTTCTTCAGATAAAAAGTTCGATAGTGGTACAGGATGGCCAAGTTTTTGGGA
TTCAATTCAAGGATCAGTAGAAACTAAAGTTGATTTTAAGTTAATTGTTCCTAGAACCGAATATCATTGCGCTAGATGCG
GAGGTCATCAAGGACATGTTTTCAATGACGGGCCACTTCCTACTGGCAAAAGATACTGTAATAATGGATTAGCATTAAGG
TTTGTTCCTGACTAA

Upstream 100 bases:

>100_bases
GTTTATCAGTACAGTCCATCATTGGAGCAATACTTAATTTATGAATATTTTTTATAGAATTATGTTGAATGTAACTCATT
ATTTTTTTTGATTTAGATAT

Downstream 100 bases:

>100_bases
ATATTTGTGCGGCCTTCCGCAACTTGTTTTGTGCATCACTTTGTTGGAGAATAGTTTTATTAAATTTTAGAAAAATGATT
GAAAATCAATCAGACAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MNQFLSRRIFILIPTMSILKIFFKPMQVLASSLASKEAWNFSRDEWKSRLSPESYYILREEGTERAFSSQLNNEKRKGIF
HCAGCDLPLFSSDKKFDSGTGWPSFWDSIQGSVETKVDFKLIVPRTEYHCARCGGHQGHVFNDGPLPTGKRYCNNGLALR
FVPD

Sequences:

>Translated_164_residues
MNQFLSRRIFILIPTMSILKIFFKPMQVLASSLASKEAWNFSRDEWKSRLSPESYYILREEGTERAFSSQLNNEKRKGIF
HCAGCDLPLFSSDKKFDSGTGWPSFWDSIQGSVETKVDFKLIVPRTEYHCARCGGHQGHVFNDGPLPTGKRYCNNGLALR
FVPD
>Mature_164_residues
MNQFLSRRIFILIPTMSILKIFFKPMQVLASSLASKEAWNFSRDEWKSRLSPESYYILREEGTERAFSSQLNNEKRKGIF
HCAGCDLPLFSSDKKFDSGTGWPSFWDSIQGSVETKVDFKLIVPRTEYHCARCGGHQGHVFNDGPLPTGKRYCNNGLALR
FVPD

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=124, Percent_Identity=49.1935483870968, Blast_Score=131, Evalue=2e-31,
Organism=Homo sapiens, GI301336162, Length=124, Percent_Identity=49.1935483870968, Blast_Score=131, Evalue=2e-31,
Organism=Homo sapiens, GI73089054, Length=124, Percent_Identity=49.1935483870968, Blast_Score=131, Evalue=2e-31,
Organism=Homo sapiens, GI37620216, Length=124, Percent_Identity=49.1935483870968, Blast_Score=130, Evalue=4e-31,
Organism=Homo sapiens, GI117606353, Length=142, Percent_Identity=47.1830985915493, Blast_Score=129, Evalue=1e-30,
Organism=Escherichia coli, GI1788077, Length=122, Percent_Identity=45.0819672131148, Blast_Score=116, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17553450, Length=136, Percent_Identity=39.7058823529412, Blast_Score=96, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI115532676, Length=136, Percent_Identity=39.7058823529412, Blast_Score=96, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6319816, Length=127, Percent_Identity=37.7952755905512, Blast_Score=98, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24645799, Length=136, Percent_Identity=43.3823529411765, Blast_Score=117, Evalue=4e-27,
Organism=Drosophila melanogaster, GI45553335, Length=130, Percent_Identity=44.6153846153846, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI21356369, Length=130, Percent_Identity=44.6153846153846, Blast_Score=117, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24645801, Length=147, Percent_Identity=40.8163265306122, Blast_Score=114, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24645804, Length=139, Percent_Identity=41.726618705036, Blast_Score=113, Evalue=4e-26,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=41.40625, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=38.5185185185185, Blast_Score=111, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 18778; Mature: 18778

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQFLSRRIFILIPTMSILKIFFKPMQVLASSLASKEAWNFSRDEWKSRLSPESYYILRE
CCCHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC
EGTERAFSSQLNNEKRKGIFHCAGCDLPLFSSDKKFDSGTGWPSFWDSIQGSVETKVDFK
CCCHHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEECEEEEE
LIVPRTEYHCARCGGHQGHVFNDGPLPTGKRYCNNGLALRFVPD
EEECCCHHHHHHCCCCCCCEECCCCCCCCHHHHCCCCEEEECCC
>Mature Secondary Structure
MNQFLSRRIFILIPTMSILKIFFKPMQVLASSLASKEAWNFSRDEWKSRLSPESYYILRE
CCCHHHCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECC
EGTERAFSSQLNNEKRKGIFHCAGCDLPLFSSDKKFDSGTGWPSFWDSIQGSVETKVDFK
CCCHHHHHHHHCCHHHCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEECEEEEE
LIVPRTEYHCARCGGHQGHVFNDGPLPTGKRYCNNGLALRFVPD
EEECCCHHHHHHCCCCCCCEECCCCCCCCHHHHCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA