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The map label for this gene is ftsY [H]

Identifier: 123967546

GI number: 123967546

Start: 11765

End: 13054

Strand: Direct

Name: ftsY [H]

Synonym: A9601_00091

Alternate gene names: 123967546

Gene position: 11765-13054 (Clockwise)

Preceding gene: 123967545

Following gene: 123967547

Centisome position: 0.7

GC content: 32.71

Gene sequence:

>1290_bases
ATGACAAATACTAATCCTGATAATTCTCGAGAGTGGGCTGCTCAAGCTTATGCTCTTTTAAAAAAGAAACAGGAAGAGCA
AAAGCAAGAATTACAGAAACAGGAAGAGCAAAAACAAGAATTACAGAAACAGGAAGAGCAAAAACAAGAATTACAGAAAC
AGGAAGAGCAAAAACAAGAATTACAGAAACAAGAAGAGCAAAAACAAGAATTGGTTGAAATTGTTAATAAAGAAAATACT
CTAGGACAGTCTAAAAATACTCCTGAAACTGAATTAGGAGAATTTGATGACAATTTTACTTGGTCTGCAATGGTATTAGC
TGCTCAAGGAAAAAAAATAAATCAAATATCGATTGATGAAATTGATTGGTTAACTAAATTACGGAGAGGATTAGAAGAAA
CCCGAAAAGGATTTGTCACTGAATTATTGGACAAATTGGGAGACGATCCTCTTACTCCGGAATCTCTTGATGATTTAGAG
ACTTTATTAATAAGGGCTGATGTAGGGATTGATTCAACCGATAAAGTTATAAGTTCTCTCAGAACAAAATTAAACGAGGA
AGTTGTGGGAGGAGAAGCAGGAATAAAATTCTTGAAGAAGGAATTAAAATTAATTATTGATAAACCAATAAAAAATTCCG
GTACTGATCTTCTAGTTCCCCAAAAGGGTAAGTTAAATGTTTGGTTATTAGTAGGTGTTAATGGTGTTGGCAAAACTACT
ACATTAGGAAAATTAGCATATTTGTCATCCAAAAGTAATTATAAAACTTTGATAGCTGCTGCTGATACTTTTAGAGCGGC
TGCAGTTGAACAACTTAAAGTATGGGGAGATAGAAGTAATGTTGACGTTATATCTAATCAATCAAAAAATGCTGATCCAG
CCGCTGTAGTTTTTGACGCAATTAATTCTGCAAAAAAAAGAAATGTTGATTTATTACTTGTTGATACAGCGGGTAGATTG
CAAACAAAAAATAATTTGATGGATGAATTAGCGAAAATAAAAAAAATTATTGATAAAAAGGTTCCAGATGCAATTGTTGA
ATCATTATTAGTATTAGATGCAAGTCAGGGTCAAAATGGCTTAAAGCAAGCAAAAAGTTTTGCTAAATCAGCAGATTTAA
GTGGAGCAATTATTACTAAATTAGATGGGACTTCTAGAGGAGGAGTATCTTTAGCTGTATCGGAAGAAGTAAATTTGCCT
ATAAGGTTTATTGGAGCTGGTGAAGGTATAAAAGATTTGAGACCTTTTAATAGTTATGAATTTGTAGAGGCTATGCTCGC
AGATAAATAA

Upstream 100 bases:

>100_bases
AATGGCGTTTTAAGGAGATTACAAACAATTTCATTGTCATAATTATTTGATATAAATATATATATTGTTTAAAAATTTTA
ATTACGAATTATAGATAATA

Downstream 100 bases:

>100_bases
ATATTTAATTAATTTTTTTAAAAAATTAAAATTTAATGTTAAAACATATTTATCTATTAGATTTGTTTTGACAAACTATC
AAAAAGAAAAAATATTTTCG

Product: signal recognition particle docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MTNTNPDNSREWAAQAYALLKKKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELVEIVNKENT
LGQSKNTPETELGEFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRRGLEETRKGFVTELLDKLGDDPLTPESLDDLE
TLLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIIDKPIKNSGTDLLVPQKGKLNVWLLVGVNGVGKTT
TLGKLAYLSSKSNYKTLIAAADTFRAAAVEQLKVWGDRSNVDVISNQSKNADPAAVVFDAINSAKKRNVDLLLVDTAGRL
QTKNNLMDELAKIKKIIDKKVPDAIVESLLVLDASQGQNGLKQAKSFAKSADLSGAIITKLDGTSRGGVSLAVSEEVNLP
IRFIGAGEGIKDLRPFNSYEFVEAMLADK

Sequences:

>Translated_429_residues
MTNTNPDNSREWAAQAYALLKKKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELVEIVNKENT
LGQSKNTPETELGEFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRRGLEETRKGFVTELLDKLGDDPLTPESLDDLE
TLLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIIDKPIKNSGTDLLVPQKGKLNVWLLVGVNGVGKTT
TLGKLAYLSSKSNYKTLIAAADTFRAAAVEQLKVWGDRSNVDVISNQSKNADPAAVVFDAINSAKKRNVDLLLVDTAGRL
QTKNNLMDELAKIKKIIDKKVPDAIVESLLVLDASQGQNGLKQAKSFAKSADLSGAIITKLDGTSRGGVSLAVSEEVNLP
IRFIGAGEGIKDLRPFNSYEFVEAMLADK
>Mature_428_residues
TNTNPDNSREWAAQAYALLKKKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQELVEIVNKENTL
GQSKNTPETELGEFDDNFTWSAMVLAAQGKKINQISIDEIDWLTKLRRGLEETRKGFVTELLDKLGDDPLTPESLDDLET
LLIRADVGIDSTDKVISSLRTKLNEEVVGGEAGIKFLKKELKLIIDKPIKNSGTDLLVPQKGKLNVWLLVGVNGVGKTTT
LGKLAYLSSKSNYKTLIAAADTFRAAAVEQLKVWGDRSNVDVISNQSKNADPAAVVFDAINSAKKRNVDLLLVDTAGRLQ
TKNNLMDELAKIKKIIDKKVPDAIVESLLVLDASQGQNGLKQAKSFAKSADLSGAIITKLDGTSRGGVSLAVSEEVNLPI
RFIGAGEGIKDLRPFNSYEFVEAMLADK

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=277, Percent_Identity=34.2960288808664, Blast_Score=154, Evalue=2e-37,
Organism=Homo sapiens, GI226371618, Length=228, Percent_Identity=36.8421052631579, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI23308697, Length=309, Percent_Identity=29.4498381877023, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI295424842, Length=309, Percent_Identity=29.4498381877023, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=36.0294117647059, Blast_Score=93, Evalue=5e-19,
Organism=Escherichia coli, GI1789874, Length=317, Percent_Identity=44.1640378548896, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1788963, Length=270, Percent_Identity=32.2222222222222, Blast_Score=139, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17539958, Length=296, Percent_Identity=31.7567567567568, Blast_Score=152, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI193206261, Length=322, Percent_Identity=30.4347826086957, Blast_Score=110, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=331, Percent_Identity=33.2326283987915, Blast_Score=159, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6320498, Length=216, Percent_Identity=34.7222222222222, Blast_Score=101, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17647949, Length=277, Percent_Identity=33.9350180505415, Blast_Score=151, Evalue=8e-37,
Organism=Drosophila melanogaster, GI24641198, Length=229, Percent_Identity=31.8777292576419, Blast_Score=103, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 47602; Mature: 47470

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTNPDNSREWAAQAYALLKKKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKQEEQKQELVEIVNKENTLGQSKNTPETELGEFDDNFTWSAMVLAAQGKKINQISIDE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHH
IDWLTKLRRGLEETRKGFVTELLDKLGDDPLTPESLDDLETLLIRADVGIDSTDKVISSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
RTKLNEEVVGGEAGIKFLKKELKLIIDKPIKNSGTDLLVPQKGKLNVWLLVGVNGVGKTT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCH
TLGKLAYLSSKSNYKTLIAAADTFRAAAVEQLKVWGDRSNVDVISNQSKNADPAAVVFDA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH
INSAKKRNVDLLLVDTAGRLQTKNNLMDELAKIKKIIDKKVPDAIVESLLVLDASQGQNG
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
LKQAKSFAKSADLSGAIITKLDGTSRGGVSLAVSEEVNLPIRFIGAGEGIKDLRPFNSYE
HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHHH
FVEAMLADK
HHHHHHCCC
>Mature Secondary Structure 
TNTNPDNSREWAAQAYALLKKKQEEQKQELQKQEEQKQELQKQEEQKQELQKQEEQKQE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQKQEEQKQELVEIVNKENTLGQSKNTPETELGEFDDNFTWSAMVLAAQGKKINQISIDE
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEEECCCCCCCCCHHH
IDWLTKLRRGLEETRKGFVTELLDKLGDDPLTPESLDDLETLLIRADVGIDSTDKVISSL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHH
RTKLNEEVVGGEAGIKFLKKELKLIIDKPIKNSGTDLLVPQKGKLNVWLLVGVNGVGKTT
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEEEEEEECCCCCCCH
TLGKLAYLSSKSNYKTLIAAADTFRAAAVEQLKVWGDRSNVDVISNQSKNADPAAVVFDA
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHH
INSAKKRNVDLLLVDTAGRLQTKNNLMDELAKIKKIIDKKVPDAIVESLLVLDASQGQNG
HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHH
LKQAKSFAKSADLSGAIITKLDGTSRGGVSLAVSEEVNLPIRFIGAGEGIKDLRPFNSYE
HHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEECCCCHHHCCCCCHHH
FVEAMLADK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]