| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967544
Identifier: 123967544
GI number: 123967544
Start: 10342
End: 11076
Strand: Direct
Name: 123967544
Synonym: A9601_00071
Alternate gene names: NA
Gene position: 10342-11076 (Clockwise)
Preceding gene: 123967540
Following gene: 123967545
Centisome position: 0.62
GC content: 34.01
Gene sequence:
>735_bases TTGGTTGAATCTAATCAAAATCAAGATTCTAATCTAGGATCTAGGCTTCAACAAGATCTCAAAAATGATCTTATTGCAGG GCTTTTAGTGGTAATACCCTTAGCAACAACAATCTGGCTTTCATCATTAGTTAGTAAATTTGTTTTAACCTTAGTTACTT CAGTCCCAAAGCAACTAAATCCATTTATTACGCTAAATCCCTTATTACAAGATTTAATTAATCTTACACTAGGGTTAACT GTTCCTCTATTAGCGATTTTGCTAATAGGTTTGATGGCGAGAAATTTTGTAGGGCGATGGCTATTAGAATTTGGAGAGGG CACTTTATCAAAAATTCCAGTAGCAGGAGCAGTTTATAAAACTCTTAAACAATTGCTGGAAACTTTCTTAAGTAATAAAT CTAATAGATTTAGAAGAGTAGTTTTAGTTGAATATCCTCGTGAGGGACTTTATAGTGTAGGCTTTGTAACTGGAGATGTA GGACCTTCTCTACAGCCAGAATTGGAAGAAAAGTTACTTAGTGTTTTTATACCTACAGCACCAAACCCAACTACGGGATG GTATACACTCGTCCCTGAATCTTCTGTTAAGGATTTGGATATTTCTGTTGAAGATGCTTTTAGAACAATAATTTCTGCGG GGATAGTAAATCCAGATGAGAAAAATAATACTACAAATCCAACATTTTCAAAATTGTTTTCTCAATTACGAGCTTCCACT AATACTTCTTCTTAA
Upstream 100 bases:
>100_bases ATAAACTTATAAATAAAATAGATATATTTAAGAAAAATATATCCTAACTTAGTAAAAACAGTTAAATTATTAGTAAAGTT AATATAGTTAAAACGTTATT
Downstream 100 bases:
>100_bases TTGATGCACAATAGATCCCTTTCTAGAGAATTGTCTTTAATTTCTCTTGGCCTGATAAAAGATAAAGGTGATTTTAAACT AAATAAATTTCAGATAGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MVESNQNQDSNLGSRLQQDLKNDLIAGLLVVIPLATTIWLSSLVSKFVLTLVTSVPKQLNPFITLNPLLQDLINLTLGLT VPLLAILLIGLMARNFVGRWLLEFGEGTLSKIPVAGAVYKTLKQLLETFLSNKSNRFRRVVLVEYPREGLYSVGFVTGDV GPSLQPELEEKLLSVFIPTAPNPTTGWYTLVPESSVKDLDISVEDAFRTIISAGIVNPDEKNNTTNPTFSKLFSQLRAST NTSS
Sequences:
>Translated_244_residues MVESNQNQDSNLGSRLQQDLKNDLIAGLLVVIPLATTIWLSSLVSKFVLTLVTSVPKQLNPFITLNPLLQDLINLTLGLT VPLLAILLIGLMARNFVGRWLLEFGEGTLSKIPVAGAVYKTLKQLLETFLSNKSNRFRRVVLVEYPREGLYSVGFVTGDV GPSLQPELEEKLLSVFIPTAPNPTTGWYTLVPESSVKDLDISVEDAFRTIISAGIVNPDEKNNTTNPTFSKLFSQLRAST NTSS >Mature_244_residues MVESNQNQDSNLGSRLQQDLKNDLIAGLLVVIPLATTIWLSSLVSKFVLTLVTSVPKQLNPFITLNPLLQDLINLTLGLT VPLLAILLIGLMARNFVGRWLLEFGEGTLSKIPVAGAVYKTLKQLLETFLSNKSNRFRRVVLVEYPREGLYSVGFVTGDV GPSLQPELEEKLLSVFIPTAPNPTTGWYTLVPESSVKDLDISVEDAFRTIISAGIVNPDEKNNTTNPTFSKLFSQLRAST NTSS
Specific function: Unknown
COG id: COG2928
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26787; Mature: 26787
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESNQNQDSNLGSRLQQDLKNDLIAGLLVVIPLATTIWLSSLVSKFVLTLVTSVPKQLN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFITLNPLLQDLINLTLGLTVPLLAILLIGLMARNFVGRWLLEFGEGTLSKIPVAGAVYK CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH TLKQLLETFLSNKSNRFRRVVLVEYPREGLYSVGFVTGDVGPSLQPELEEKLLSVFIPTA HHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHCEEECCCCCCCCHHHHHHHHHHHCCCC PNPTTGWYTLVPESSVKDLDISVEDAFRTIISAGIVNPDEKNNTTNPTFSKLFSQLRAST CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC NTSS CCCC >Mature Secondary Structure MVESNQNQDSNLGSRLQQDLKNDLIAGLLVVIPLATTIWLSSLVSKFVLTLVTSVPKQLN CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PFITLNPLLQDLINLTLGLTVPLLAILLIGLMARNFVGRWLLEFGEGTLSKIPVAGAVYK CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHH TLKQLLETFLSNKSNRFRRVVLVEYPREGLYSVGFVTGDVGPSLQPELEEKLLSVFIPTA HHHHHHHHHHCCCCCHHEEEEEEECCCCCCHHHCEEECCCCCCCCHHHHHHHHHHHCCCC PNPTTGWYTLVPESSVKDLDISVEDAFRTIISAGIVNPDEKNNTTNPTFSKLFSQLRAST CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHC NTSS CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA