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The map label for this gene is atpF

Identifier: 121999212

GI number: 121999212

Start: 2674542

End: 2674982

Strand: Reverse

Name: atpF

Synonym: Hhal_2434

Alternate gene names: 121999212

Gene position: 2674982-2674542 (Counterclockwise)

Preceding gene: 121999213

Following gene: 121999211

Centisome position: 99.87

GC content: 64.85

Gene sequence:

>441_bases
ATGATCAGCTTCGCGCTGTTCGTCTGGTTCACCATGAAATTCGTCTGGCCGCCGATCCAACAGGCGCTTGCCGACCGGCA
GAAGCAGATTGCCGACGGCCTTGCCGCCGGTGAACGCGGCAAGGAGGAGCTGGACAAGGCTCAGGCCGAGGTCGAGGCCA
TGCTGCGGGATGCCCGGGAGCAGGCCAGCCAGATCATCAACCAGGCGAACAAGCGCCAGGCCGAGATGATCGAGGAGGCT
CGGGCCGAGGCCCGCTCCGAGGCCGACCGGATCCTGGCCTCCGCCCGCGAGGAGATCGATCAAGAGATCCAGCGGGCCCG
TGAGGATCTGCGTAAGCAGGTCTCGACCATCGCCGTCCAGGCGAGCAGCCAGATCCTGAAGCGCGAGGTGGACGCCAAGG
CGCACAAGGATCTGATCGACGAACTGGCGACGCAAATCTAG

Upstream 100 bases:

>100_bases
TCGAGGCCGCCGCCGGCGCGTAAACACACGCCGGCGCTTTTAAGCCGCCAGCTCGATCGGAGGTGAAACCGTGAACTTTG
GTGCCACGTTCTGGGGGCCG

Downstream 100 bases:

>100_bases
GGAGGCGCCATGGCCGAGCGCAGCACACTGGCCCGACCTTACGCGCGCGCCGTCTTCGAGCTTGCCGGTGACGACGCGAC
CGAGCGCCAGGCTTGGTCGC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEAMLRDAREQASQIINQANKRQAEMIEEA
RAEARSEADRILASAREEIDQEIQRAREDLRKQVSTIAVQASSQILKREVDAKAHKDLIDELATQI

Sequences:

>Translated_146_residues
MISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEAMLRDAREQASQIINQANKRQAEMIEEA
RAEARSEADRILASAREEIDQEIQRAREDLRKQVSTIAVQASSQILKREVDAKAHKDLIDELATQI
>Mature_146_residues
MISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEAMLRDAREQASQIINQANKRQAEMIEEA
RAEARSEADRILASAREEIDQEIQRAREDLRKQVSTIAVQASSQILKREVDAKAHKDLIDELATQI

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

Organism=Escherichia coli, GI1790174, Length=145, Percent_Identity=47.5862068965517, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_HALHL (A1WZT5)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003999.1
- STRING:   A1WZT5
- GeneID:   4709690
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_2434
- eggNOG:   COG0711
- HOGENOM:   HBG617328
- ProtClustDB:   PRK05759
- BioCyc:   HHAL349124:HHAL_2434-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146
- InterPro:   IPR005864
- TIGRFAMs:   TIGR01144

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 16574; Mature: 16574

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1c7d3a0c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEAMLRDARE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QASQIINQANKRQAEMIEEARAEARSEADRILASAREEIDQEIQRAREDLRKQVSTIAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSQILKREVDAKAHKDLIDELATQI
HHHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEAMLRDARE
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
QASQIINQANKRQAEMIEEARAEARSEADRILASAREEIDQEIQRAREDLRKQVSTIAVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSQILKREVDAKAHKDLIDELATQI
HHHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA