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The map label for this gene is atpC

Identifier: 121999207

GI number: 121999207

Start: 2669630

End: 2670055

Strand: Reverse

Name: atpC

Synonym: Hhal_2429

Alternate gene names: 121999207

Gene position: 2670055-2669630 (Counterclockwise)

Preceding gene: 121999208

Following gene: 121999206

Centisome position: 99.69

GC content: 68.78

Gene sequence:

>426_bases
ATGAGCACGCTCCAAGTCGACATCGTAAGTGCTGAAGAGCAGCTGTACGCCGGCCAGGCGAGCATGGTCATTGCGCCGGC
GGCCGAGGGTGACGTGGGCATAGCCCCGCGTCACGCTCCGCTGCTGACCCGGTTGCGTCCGGGTGAGCTGCGCATCACCC
CGGAGGGCGACGAAGAGGAATTCTTCTTCTACGCCTCCGGGGGCCTGCTCGAGGTCCAGCCGCACAAGGTCACCGTCCTC
GCCGACACGGCGGTCCGTGCCCGGGACATCGACGAGGCCGCGGCCCTCGAGGCCAAGCGGCGGGCCGAGGAGAAGCTCCG
CGAGCAGAAGGACGAGGTGGACTACAGCTCGGTCCAGGCGGAGCTTGCCGAGGCCATGGCGCAGCTGCGAACCCTGGAGA
GCCTGCGCAAGCGGGCCAAGCGCTGA

Upstream 100 bases:

>100_bases
CGACGGCGAGTACGACCACCTGCCCGAGCAGGCGTTCTACATGGTCGGTACCGTCGAAGAGGCCGCCGAGAAGGCCAAGA
ACCTGTAATCCGGGGGTGCC

Downstream 100 bases:

>100_bases
CCCGAACGGAGGAACCGACCATGCGGGCACCTGTTGCCGTGGTCATACTGGCTGCGGGCAAAGGGACCCGCATGCGCTCG
GCCCAGCCTAAGGTTCTGCA

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSTLQVDIVSAEEQLYAGQASMVIAPAAEGDVGIAPRHAPLLTRLRPGELRITPEGDEEEFFFYASGGLLEVQPHKVTVL
ADTAVRARDIDEAAALEAKRRAEEKLREQKDEVDYSSVQAELAEAMAQLRTLESLRKRAKR

Sequences:

>Translated_141_residues
MSTLQVDIVSAEEQLYAGQASMVIAPAAEGDVGIAPRHAPLLTRLRPGELRITPEGDEEEFFFYASGGLLEVQPHKVTVL
ADTAVRARDIDEAAALEAKRRAEEKLREQKDEVDYSSVQAELAEAMAQLRTLESLRKRAKR
>Mature_140_residues
STLQVDIVSAEEQLYAGQASMVIAPAAEGDVGIAPRHAPLLTRLRPGELRITPEGDEEEFFFYASGGLLEVQPHKVTVLA
DTAVRARDIDEAAALEAKRRAEEKLREQKDEVDYSSVQAELAEAMAQLRTLESLRKRAKR

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=135, Percent_Identity=51.8518518518518, Blast_Score=145, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_HALHL (A1WZT0)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003994.1
- ProteinModelPortal:   A1WZT0
- SMR:   A1WZT0
- STRING:   A1WZT0
- GeneID:   4710799
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_2429
- eggNOG:   COG0355
- HOGENOM:   HBG663981
- OMA:   SAEASIF
- PhylomeDB:   A1WZT0
- ProtClustDB:   PRK00571
- BioCyc:   HHAL349124:HHAL_2429-MONOMER
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15575; Mature: 15444

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLQVDIVSAEEQLYAGQASMVIAPAAEGDVGIAPRHAPLLTRLRPGELRITPEGDEEE
CCCEEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC
FFFYASGGLLEVQPHKVTVLADTAVRARDIDEAAALEAKRRAEEKLREQKDEVDYSSVQA
EEEEECCCEEEECCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELAEAMAQLRTLESLRKRAKR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLQVDIVSAEEQLYAGQASMVIAPAAEGDVGIAPRHAPLLTRLRPGELRITPEGDEEE
CCEEEEEECCHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCC
FFFYASGGLLEVQPHKVTVLADTAVRARDIDEAAALEAKRRAEEKLREQKDEVDYSSVQA
EEEEECCCEEEECCCEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
ELAEAMAQLRTLESLRKRAKR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA