| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is pfkA1 [H]
Identifier: 121999096
GI number: 121999096
Start: 2543148
End: 2544416
Strand: Reverse
Name: pfkA1 [H]
Synonym: Hhal_2318
Alternate gene names: 121999096
Gene position: 2544416-2543148 (Counterclockwise)
Preceding gene: 121999098
Following gene: 121999092
Centisome position: 95.0
GC content: 68.64
Gene sequence:
>1269_bases ATGCCAAAGAACGCACTATATGCTCAGTCCGGTGGCGTCACGGCGGTCATCAACGCCAGCGCCTGGGGGGTGATCGAGGC GGTGCGGGGTCACCCGGCCCATTTCGGCACCTGCTACGCGGCTCGTAACGGGATCCTCGGGGTGCTCGAGGAGGAGATCC TCGATCTCGATGAGGAGGATCCGCTGACCCTGGCCGCCCTGCGCCATACCCCCGGGGGGGCGTTCGGGTCGTGCCGTTTC GACCTCGGTGACTTGAAGCGGGATCGGGCGCAGTACGAGCGCCTGGTGGAGGTCTTCCACGCCCACGACATTGGCTACTT CTTCTACAACGGCGGCGGTGGCTCCATGGACACCGCCCACAAGGTCGCGCGCATCGGCGACGAACTCGGCTACCCGATCA CCGCCGTCGGCGTGCCCAAGACCATCGACAACGACCTGGGCATGACCGACACCAGTCCCGGGTTTGGATCGGCGGCCAAG TTCATCGCCACGGTGGTCCGTGAGGCGAGCCTGGACGTCGAGTCGGCCCACACCACCTCGACGCGGGTCTTCATCCTCGA GGTCATGGGGCGCCACGCCGGGTGGCTGGCGGCGGCAGCGGCGCTGGCCCAGGAGTACGACGGCCGGCCGCCGATGCTGA TCCTGTTCCCCGAGACCCCCTTCGATCTCGGCGATTTTCTCACCCAGCTCCAGATGGCGGTCCGCACCCACGGCTACTGC GTGGTGGTCGCCTCCGAGGGGCTCAAGAACCCCGATGGCTCCCTGTTCTCCGTGGCGCAGAGCCACGATATCTACGCCTA CACCCAGCTAGGTGGCGTGGCGCCGCGGCTGGCCGAGATCATCCGCCAGGAGACCGGCCTTAAGCTGCACTGGTCGGTGG TGGACTACATCCAGCGGGCGGCCCGGCATCTGGCCTCGCGGGTGGATGTGCAGCAGGCCTATGCGGTGGGGCGGTCCGCC GTCGAGGGCGTGGTGGCCGGCGAGCACAGCTTCATGCCCGTCATCCGCCGGGATTCGGATCGGCCCTACCGGTGGTCCAT CGACCGGGTGCCGCTGGAGGCGGTGGCGAGTATCGAGCGCGGGCTGCCGCCCGCGTTCATCTCGCCGGATGGCTACGGCA TCACCGCCGCCTGTCGCGATTACCTGCGGCCGCTCATCGAGGGGGAGGACTATCCGCCGTTCGACCGCGGGCTGCCCTGT TACCCGCGGATTCGCGGGGTGCTCCGCCCGCAGCGCTGCGCGCCGTTTCGCGTCGAGTCGCCGGGCTAA
Upstream 100 bases:
>100_bases GAAATCCGCCGCCCATTGCCCGGCGGCGGCAAGCGTTCGGTGCATTCCTTCGGTACATTGGTGCGCAAGCCCATGAGCGT CAACACACAAGTCTGATCGC
Downstream 100 bases:
>100_bases CGCTCGGTCGGCGCCGCCCCGGGGCGTGACTCGAGGTGGGCGAGGATGGCGTCGGCGTAGAGGCCCGCGGTGTCCTGGGC CGCCTGGACCGTGGCCGCAG
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: ATP-PFK; Phosphofructokinase 1; Phosphohexokinase 1 [H]
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPKNALYAQSGGVTAVINASAWGVIEAVRGHPAHFGTCYAARNGILGVLEEEILDLDEEDPLTLAALRHTPGGAFGSCRF DLGDLKRDRAQYERLVEVFHAHDIGYFFYNGGGGSMDTAHKVARIGDELGYPITAVGVPKTIDNDLGMTDTSPGFGSAAK FIATVVREASLDVESAHTTSTRVFILEVMGRHAGWLAAAAALAQEYDGRPPMLILFPETPFDLGDFLTQLQMAVRTHGYC VVVASEGLKNPDGSLFSVAQSHDIYAYTQLGGVAPRLAEIIRQETGLKLHWSVVDYIQRAARHLASRVDVQQAYAVGRSA VEGVVAGEHSFMPVIRRDSDRPYRWSIDRVPLEAVASIERGLPPAFISPDGYGITAACRDYLRPLIEGEDYPPFDRGLPC YPRIRGVLRPQRCAPFRVESPG
Sequences:
>Translated_422_residues MPKNALYAQSGGVTAVINASAWGVIEAVRGHPAHFGTCYAARNGILGVLEEEILDLDEEDPLTLAALRHTPGGAFGSCRF DLGDLKRDRAQYERLVEVFHAHDIGYFFYNGGGGSMDTAHKVARIGDELGYPITAVGVPKTIDNDLGMTDTSPGFGSAAK FIATVVREASLDVESAHTTSTRVFILEVMGRHAGWLAAAAALAQEYDGRPPMLILFPETPFDLGDFLTQLQMAVRTHGYC VVVASEGLKNPDGSLFSVAQSHDIYAYTQLGGVAPRLAEIIRQETGLKLHWSVVDYIQRAARHLASRVDVQQAYAVGRSA VEGVVAGEHSFMPVIRRDSDRPYRWSIDRVPLEAVASIERGLPPAFISPDGYGITAACRDYLRPLIEGEDYPPFDRGLPC YPRIRGVLRPQRCAPFRVESPG >Mature_421_residues PKNALYAQSGGVTAVINASAWGVIEAVRGHPAHFGTCYAARNGILGVLEEEILDLDEEDPLTLAALRHTPGGAFGSCRFD LGDLKRDRAQYERLVEVFHAHDIGYFFYNGGGGSMDTAHKVARIGDELGYPITAVGVPKTIDNDLGMTDTSPGFGSAAKF IATVVREASLDVESAHTTSTRVFILEVMGRHAGWLAAAAALAQEYDGRPPMLILFPETPFDLGDFLTQLQMAVRTHGYCV VVASEGLKNPDGSLFSVAQSHDIYAYTQLGGVAPRLAEIIRQETGLKLHWSVVDYIQRAARHLASRVDVQQAYAVGRSAV EGVVAGEHSFMPVIRRDSDRPYRWSIDRVPLEAVASIERGLPPAFISPDGYGITAACRDYLRPLIEGEDYPPFDRGLPCY PRIRGVLRPQRCAPFRVESPG
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Escherichia coli, GI1790350, Length=322, Percent_Identity=27.3291925465839, Blast_Score=79, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17558788, Length=285, Percent_Identity=28.4210526315789, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.11 [H]
Molecular weight: Translated: 45927; Mature: 45795
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKNALYAQSGGVTAVINASAWGVIEAVRGHPAHFGTCYAARNGILGVLEEEILDLDEED CCCCCEEECCCCEEEEEECCCCHHHHHHCCCCCHHEHHHHHCCCCHHHHHHHHHCCCCCC PLTLAALRHTPGGAFGSCRFDLGDLKRDRAQYERLVEVFHAHDIGYFFYNGGGGSMDTAH CEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH KVARIGDELGYPITAVGVPKTIDNDLGMTDTSPGFGSAAKFIATVVREASLDVESAHTTS HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC TRVFILEVMGRHAGWLAAAAALAQEYDGRPPMLILFPETPFDLGDFLTQLQMAVRTHGYC HHEEEEEHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEE VVVASEGLKNPDGSLFSVAQSHDIYAYTQLGGVAPRLAEIIRQETGLKLHWSVVDYIQRA EEEECCCCCCCCCCEEEECCCCCEEEEHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH ARHLASRVDVQQAYAVGRSAVEGVVAGEHSFMPVIRRDSDRPYRWSIDRVPLEAVASIER HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCEEEECCCCCHHHHHHHHH GLPPAFISPDGYGITAACRDYLRPLIEGEDYPPFDRGLPCYPRIRGVLRPQRCAPFRVES CCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEECCC PG CC >Mature Secondary Structure PKNALYAQSGGVTAVINASAWGVIEAVRGHPAHFGTCYAARNGILGVLEEEILDLDEED CCCCEEECCCCEEEEEECCCCHHHHHHCCCCCHHEHHHHHCCCCHHHHHHHHHCCCCCC PLTLAALRHTPGGAFGSCRFDLGDLKRDRAQYERLVEVFHAHDIGYFFYNGGGGSMDTAH CEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHH KVARIGDELGYPITAVGVPKTIDNDLGMTDTSPGFGSAAKFIATVVREASLDVESAHTTS HHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC TRVFILEVMGRHAGWLAAAAALAQEYDGRPPMLILFPETPFDLGDFLTQLQMAVRTHGYC HHEEEEEHHCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEE VVVASEGLKNPDGSLFSVAQSHDIYAYTQLGGVAPRLAEIIRQETGLKLHWSVVDYIQRA EEEECCCCCCCCCCEEEECCCCCEEEEHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHHH ARHLASRVDVQQAYAVGRSAVEGVVAGEHSFMPVIRRDSDRPYRWSIDRVPLEAVASIER HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCEEEECCCCCHHHHHHHHH GLPPAFISPDGYGITAACRDYLRPLIEGEDYPPFDRGLPCYPRIRGVLRPQRCAPFRVES CCCCCEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEECCC PG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9055413; 12000953 [H]