Click here to switch to the map view.

The map label for this gene is rimK [H]

Identifier: 121999051

GI number: 121999051

Start: 2494340

End: 2495266

Strand: Reverse

Name: rimK [H]

Synonym: Hhal_2272

Alternate gene names: 121999051

Gene position: 2495266-2494340 (Counterclockwise)

Preceding gene: 121999052

Following gene: 121999050

Centisome position: 93.16

GC content: 67.1

Gene sequence:

>927_bases
ATGGCCGTGATGAATTCGCCGCGCGCCGCCATCCTGGCGGCGGGTGGTCTGCTGCTCACTGCCGGCTGTGCGGCCCCGGA
TTACCTGCTCATCGAAGAAGCTGAGACGGAGCGCTTCGAACAGCGTTTCGACGGCGTGGATGAGCGTCTGGAGGCCCTGG
CCGACGCCCACGAGCAGTCCCAACGAGTAGCGCGCGAGGCGCAGCTGGCGCGGATCGCCGGTGCCATGGAGGCACAGACG
GCGAACCGCTGGCTGGTGCCGCTGCGCCCCGTTGATCTGGGCGAGTCGGACTGCCCGGAGCCGAGCTGTCCCGACGACCA
GCTCCAGTCCGATCAGGAGCTCAGTGCCGACGGCATGCTCGTCTTCGGCGAGATTGAGGAGCTCCAGCTGGATCCGCCCG
GGCTGCTCTTCGATGCCCGGATCGATACTGGTGCCTCGACCTCCTCCGTGGATGCCCGCGAGATCGAAGAGTTCGAACGC
GACGGCGACCCCTGGGTTCGCTTCGAGATGATCCACCCGGAGGGCGATGGCCGGATCGCCATCGAGCGTCCCAAGGTGCG
CAGCGCCAGCATCGTCCAGGCCTCCGGGGAGGAATCTCGGCCGGTGGTGGAACTGCACGTGACCATCGGTGAGTTCTCCG
AGGTGGCCGAATTCACCCTGACCGACCGCAGCCACCTGACCTTTCCGGTGCTGATCGGGCGCGATGTGCTGCGCGACGTG
GCCGTGGTGGATGTCGGCCTGGAGCGCGCCACCGAGCCCATGACCCCGGATGACGACGACCTCGACGCCATCGACGCCGA
TGACCATGTCGAGGAGATTCCGGAGGACGAGGACGAGGACGACGAGGAGACCGAAGACGACGACGGGGACGAGAACGGTG
ACGATGACGAGGCGGGGGAGAACGAGGATGACGGCGAGGACGAGTAG

Upstream 100 bases:

>100_bases
CGACCTGCGATCCGGAAGCGGTCTCAGCGATTGCCCGGATCCTCTGCGAGGCGTGCGACGAGCTCGGGAACGAAACCGCA
ACCCAAGAGGTCCGAAGGGT

Downstream 100 bases:

>100_bases
GCGGGCCGGGCGGTCCGCCGCGGCGTGAGGGACTCGAGGGGTGCGGTTGTGACTGCCCGTAGGGTCTTCTTCGCGCTGGT
GGCGCTGCTGATCATCGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MAVMNSPRAAILAAGGLLLTAGCAAPDYLLIEEAETERFEQRFDGVDERLEALADAHEQSQRVAREAQLARIAGAMEAQT
ANRWLVPLRPVDLGESDCPEPSCPDDQLQSDQELSADGMLVFGEIEELQLDPPGLLFDARIDTGASTSSVDAREIEEFER
DGDPWVRFEMIHPEGDGRIAIERPKVRSASIVQASGEESRPVVELHVTIGEFSEVAEFTLTDRSHLTFPVLIGRDVLRDV
AVVDVGLERATEPMTPDDDDLDAIDADDHVEEIPEDEDEDDEETEDDDGDENGDDDEAGENEDDGEDE

Sequences:

>Translated_308_residues
MAVMNSPRAAILAAGGLLLTAGCAAPDYLLIEEAETERFEQRFDGVDERLEALADAHEQSQRVAREAQLARIAGAMEAQT
ANRWLVPLRPVDLGESDCPEPSCPDDQLQSDQELSADGMLVFGEIEELQLDPPGLLFDARIDTGASTSSVDAREIEEFER
DGDPWVRFEMIHPEGDGRIAIERPKVRSASIVQASGEESRPVVELHVTIGEFSEVAEFTLTDRSHLTFPVLIGRDVLRDV
AVVDVGLERATEPMTPDDDDLDAIDADDHVEEIPEDEDEDDEETEDDDGDENGDDDEAGENEDDGEDE
>Mature_307_residues
AVMNSPRAAILAAGGLLLTAGCAAPDYLLIEEAETERFEQRFDGVDERLEALADAHEQSQRVAREAQLARIAGAMEAQTA
NRWLVPLRPVDLGESDCPEPSCPDDQLQSDQELSADGMLVFGEIEELQLDPPGLLFDARIDTGASTSSVDAREIEEFERD
GDPWVRFEMIHPEGDGRIAIERPKVRSASIVQASGEESRPVVELHVTIGEFSEVAEFTLTDRSHLTFPVLIGRDVLRDVA
VVDVGLERATEPMTPDDDDLDAIDADDHVEEIPEDEDEDDEETEDDDGDENGDDDEAGENEDDGEDE

Specific function: Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6 [H]

COG id: COG4067

COG function: function code O; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR008503
- InterPro:   IPR009007
- InterPro:   IPR004666 [H]

Pfam domain/function: PF05618 DUF785; PF08443 RimK [H]

EC number: NA

Molecular weight: Translated: 33817; Mature: 33686

Theoretical pI: Translated: 3.65; Mature: 3.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVMNSPRAAILAAGGLLLTAGCAAPDYLLIEEAETERFEQRFDGVDERLEALADAHEQS
CCCCCCCCEEEEECCCHHEEECCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHH
QRVAREAQLARIAGAMEAQTANRWLVPLRPVDLGESDCPEPSCPDDQLQSDQELSADGML
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEE
VFGEIEELQLDPPGLLFDARIDTGASTSSVDAREIEEFERDGDPWVRFEMIHPEGDGRIA
EEECHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEE
IERPKVRSASIVQASGEESRPVVELHVTIGEFSEVAEFTLTDRSHLTFPVLIGRDVLRDV
EECCCCCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHH
AVVDVGLERATEPMTPDDDDLDAIDADDHVEEIPEDEDEDDEETEDDDGDENGDDDEAGE
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NEDDGEDE
CCCCCCCC
>Mature Secondary Structure 
AVMNSPRAAILAAGGLLLTAGCAAPDYLLIEEAETERFEQRFDGVDERLEALADAHEQS
CCCCCCCEEEEECCCHHEEECCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHH
QRVAREAQLARIAGAMEAQTANRWLVPLRPVDLGESDCPEPSCPDDQLQSDQELSADGML
HHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEE
VFGEIEELQLDPPGLLFDARIDTGASTSSVDAREIEEFERDGDPWVRFEMIHPEGDGRIA
EEECHHEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCEEE
IERPKVRSASIVQASGEESRPVVELHVTIGEFSEVAEFTLTDRSHLTFPVLIGRDVLRDV
EECCCCCCCCEEECCCCCCCCEEEEEEEHHHHHHHHHHEECCCCCCEEHHHHHHHHHHHH
AVVDVGLERATEPMTPDDDDLDAIDADDHVEEIPEDEDEDDEETEDDDGDENGDDDEAGE
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NEDDGEDE
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA