| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121999048
Identifier: 121999048
GI number: 121999048
Start: 2490301
End: 2491740
Strand: Reverse
Name: 121999048
Synonym: Hhal_2269
Alternate gene names: NA
Gene position: 2491740-2490301 (Counterclockwise)
Preceding gene: 121999049
Following gene: 121999046
Centisome position: 93.03
GC content: 69.1
Gene sequence:
>1440_bases ATGGCCGTTGCCGAGATCCTGCTCGCCATCCTGCTGCTCTGCCTGCTGGTCCTGGCCAGCGCGGTGCTGCGGGCTTACAC ACTCTGGGCGCGGAGGCTGTTCCTGCCCGCCTCGATCATCGCCGGTGCCGCGGGGCTGCTGCTGGGCCCGGAGGTGCTGG GCCGTTTCATGGACAGCCCGTTCGAGGACGGGGCGGGCCTCTTCCCGGACTACGTCTATCAGACCTGGTCGGCCATCCCC GGCCTGCTGATCAGCGTGGTCTTCGCCGCACTGTTTCTCGGCAAGCCGTTGCCCGGGGTGCGCGAGATCTGGCTGCGGGC CGGTCCCCAGGTGGTGGTCGGGCAGACCATGGCGTGGGGGCAGTACGTGGTCGGTATCCTGCTGGCGCTGTTGGTGTTGA CGCCGGTCTTCGGTCTCAGCCCCATGGCCGGCGCGTTGATCGAGATCGGCTTCGAAGGTGGCCACGGCACGGCCGCCGGG ATGGCCGGGACCTTTGAGGATCTGGGCTTCGCCGCCGGTGCGGACCTGGCCCTGGGGCTGGCCACGGTGGGTCTGGTCGG TGGCGTCGTGGTCGGTACCATCCTGATCAACCTGGCGGTGCGCCGGGGGATTATCGACAACCCGGAGAACGGTCACGGGC CGGGTGGCGACCAGGATCGCTTCAGCGAGCGCGAGCTCTACGTGCTGCGCCGCGACCGCCAGCAGGAGAGTCAGACCACC GATCCGCTCACCGTCCACCTCGGCCTGGTGGCCCTGGCGGTCGTCCTGGGGTGGGGCATGCTCTCGGCCCTGCAGTGGTT CGAGGCGGTGACCTGGGCCCGGGACGGCGGTGTCGAGATCCTCCAGCACGTGCCGCTGTTCCCCATGGCCATGCTCGGCG GCGTATTGCTCCAGGTGCTCATCACCCGGGCCGGCTACGCCGAGTACGTATCGGAACGGACCATGTCGCGGATCTCCGGC ACGGCACTGGATTTCACCATCGTGGCCGCCCTGGCCACCCTGTCGCTGACCGCCCTGGGTGAGCACCTGGTGCCTTTCCT GCTGCTCGCCGCCACGGGGATCGCCTGGTCGCTGTTCGTGCTGGTGGTGATCGCCCCGCGGGTCATCCCCTTCGACTGGT TCGAGCGTGGTGTGGGGGACTTCGGTCAATCGATGGGCGTGACGGTCACCGGCGTGCTGCTCATGCGCATGGCCGACCCC AATAACCGCTCCGGCGCCCTGGAGAGCTTCGGCTACAAGCAGCTGCTCTTTGAGCCCATCGTCGGCGGTGGGTTGTTCAC CGCTGCGTCGCTGCCCTTGATCTACCAGTTCGGGCCGGTTCCGGTGCTGATCCTGGCCGCGGTCATCACCCTGGCCTGGC TCGCCCTGGGCTTCCTCTACTTCGGCCGCATGGTGCCGGACCGCGGGCGCGGGCGTCTGCGGCCCACGGCGCGGGGCTGA
Upstream 100 bases:
>100_bases TGGAGCAGTTCGCCGCCGGTACCTAAGGGCCTCTCCCTCTGGCCCTGAGGGGCGCGGCCCTCGTAGGATGCGGGGTCGTG TCAAACGGGGGTGACTCACG
Downstream 100 bases:
>100_bases CTGGATGGGCCGGACCGCGCGGGGCGGGTCAGCGGGCCATCAGGCGCTGGTAAGCGTCGTTGATCCGCTGCAGGGTGGCG GTATCGCCGCCGCGGTCCGG
Product: sodium/glutamate symporter
Products: NA
Alternate protein names: Na+/Glutamate Symporter; Sodium/Solute Symporter Family Protein; Sodium/Glutamate Symporter Superfamily; SodiumSolute Symporter ESS Family; Sodium/Glutamate Symport Carrier Protein
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MAVAEILLAILLLCLLVLASAVLRAYTLWARRLFLPASIIAGAAGLLLGPEVLGRFMDSPFEDGAGLFPDYVYQTWSAIP GLLISVVFAALFLGKPLPGVREIWLRAGPQVVVGQTMAWGQYVVGILLALLVLTPVFGLSPMAGALIEIGFEGGHGTAAG MAGTFEDLGFAAGADLALGLATVGLVGGVVVGTILINLAVRRGIIDNPENGHGPGGDQDRFSERELYVLRRDRQQESQTT DPLTVHLGLVALAVVLGWGMLSALQWFEAVTWARDGGVEILQHVPLFPMAMLGGVLLQVLITRAGYAEYVSERTMSRISG TALDFTIVAALATLSLTALGEHLVPFLLLAATGIAWSLFVLVVIAPRVIPFDWFERGVGDFGQSMGVTVTGVLLMRMADP NNRSGALESFGYKQLLFEPIVGGGLFTAASLPLIYQFGPVPVLILAAVITLAWLALGFLYFGRMVPDRGRGRLRPTARG
Sequences:
>Translated_479_residues MAVAEILLAILLLCLLVLASAVLRAYTLWARRLFLPASIIAGAAGLLLGPEVLGRFMDSPFEDGAGLFPDYVYQTWSAIP GLLISVVFAALFLGKPLPGVREIWLRAGPQVVVGQTMAWGQYVVGILLALLVLTPVFGLSPMAGALIEIGFEGGHGTAAG MAGTFEDLGFAAGADLALGLATVGLVGGVVVGTILINLAVRRGIIDNPENGHGPGGDQDRFSERELYVLRRDRQQESQTT DPLTVHLGLVALAVVLGWGMLSALQWFEAVTWARDGGVEILQHVPLFPMAMLGGVLLQVLITRAGYAEYVSERTMSRISG TALDFTIVAALATLSLTALGEHLVPFLLLAATGIAWSLFVLVVIAPRVIPFDWFERGVGDFGQSMGVTVTGVLLMRMADP NNRSGALESFGYKQLLFEPIVGGGLFTAASLPLIYQFGPVPVLILAAVITLAWLALGFLYFGRMVPDRGRGRLRPTARG >Mature_478_residues AVAEILLAILLLCLLVLASAVLRAYTLWARRLFLPASIIAGAAGLLLGPEVLGRFMDSPFEDGAGLFPDYVYQTWSAIPG LLISVVFAALFLGKPLPGVREIWLRAGPQVVVGQTMAWGQYVVGILLALLVLTPVFGLSPMAGALIEIGFEGGHGTAAGM AGTFEDLGFAAGADLALGLATVGLVGGVVVGTILINLAVRRGIIDNPENGHGPGGDQDRFSERELYVLRRDRQQESQTTD PLTVHLGLVALAVVLGWGMLSALQWFEAVTWARDGGVEILQHVPLFPMAMLGGVLLQVLITRAGYAEYVSERTMSRISGT ALDFTIVAALATLSLTALGEHLVPFLLLAATGIAWSLFVLVVIAPRVIPFDWFERGVGDFGQSMGVTVTGVLLMRMADPN NRSGALESFGYKQLLFEPIVGGGLFTAASLPLIYQFGPVPVLILAAVITLAWLALGFLYFGRMVPDRGRGRLRPTARG
Specific function: Unknown
COG id: COG0786
COG function: function code E; Na+/glutamate symporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50888; Mature: 50757
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAEILLAILLLCLLVLASAVLRAYTLWARRLFLPASIIAGAAGLLLGPEVLGRFMDSP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC FEDGAGLFPDYVYQTWSAIPGLLISVVFAALFLGKPLPGVREIWLRAGPQVVVGQTMAWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHH QYVVGILLALLVLTPVFGLSPMAGALIEIGFEGGHGTAAGMAGTFEDLGFAAGADLALGL HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCHHCCCCCHHHHHHHCCCHHHHHH ATVGLVGGVVVGTILINLAVRRGIIDNPENGHGPGGDQDRFSERELYVLRRDRQQESQTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPLTVHLGLVALAVVLGWGMLSALQWFEAVTWARDGGVEILQHVPLFPMAMLGGVLLQVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH ITRAGYAEYVSERTMSRISGTALDFTIVAALATLSLTALGEHLVPFLLLAATGIAWSLFV HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVIAPRVIPFDWFERGVGDFGQSMGVTVTGVLLMRMADPNNRSGALESFGYKQLLFEPI HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHH VGGGLFTAASLPLIYQFGPVPVLILAAVITLAWLALGFLYFGRMVPDRGRGRLRPTARG HCCHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AVAEILLAILLLCLLVLASAVLRAYTLWARRLFLPASIIAGAAGLLLGPEVLGRFMDSP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC FEDGAGLFPDYVYQTWSAIPGLLISVVFAALFLGKPLPGVREIWLRAGPQVVVGQTMAWG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEECCHHHHH QYVVGILLALLVLTPVFGLSPMAGALIEIGFEGGHGTAAGMAGTFEDLGFAAGADLALGL HHHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCHHCCCCCHHHHHHHCCCHHHHHH ATVGLVGGVVVGTILINLAVRRGIIDNPENGHGPGGDQDRFSERELYVLRRDRQQESQTT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC DPLTVHLGLVALAVVLGWGMLSALQWFEAVTWARDGGVEILQHVPLFPMAMLGGVLLQVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHH ITRAGYAEYVSERTMSRISGTALDFTIVAALATLSLTALGEHLVPFLLLAATGIAWSLFV HHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVVIAPRVIPFDWFERGVGDFGQSMGVTVTGVLLMRMADPNNRSGALESFGYKQLLFEPI HHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHH VGGGLFTAASLPLIYQFGPVPVLILAAVITLAWLALGFLYFGRMVPDRGRGRLRPTARG HCCHHHHHHCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA