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The map label for this gene is ycbC [H]

Identifier: 121999045

GI number: 121999045

Start: 2486595

End: 2487401

Strand: Reverse

Name: ycbC [H]

Synonym: Hhal_2266

Alternate gene names: 121999045

Gene position: 2487401-2486595 (Counterclockwise)

Preceding gene: 121999046

Following gene: 121999042

Centisome position: 92.87

GC content: 72.37

Gene sequence:

>807_bases
GTGTTCGTGATCAGCAAACTGGCCGGTGCCGTGCTGATGCCGCTGAGCCTGCTGGTGCTGGCCGGTATCCTCGGCGTGAT
CCTGCTCTTGACCCGCTACTGGCGCTGGGGCCGGGGGGTGCTGATCGGCACCGTGGTGGCCCTCTACCTGGCCAGTTGGG
AGCCCACCGCCAGCCGTTTGCTGGCCCCGCTGGAGCAGCGCTACCCGGCGCTGCTCGACCCGGCCGGGGTGGCCGAGACG
CAGGGGCCGGTGACCGACATCGTGGTCCTCGGCCACGGCCATCGGCTCGACCCGCAGCTGCCCATTACCGCCCAGGCCAA
CGCCGACGGCGTGACCCGCGTCCTCGAAGGGGTCCGCCTGCAGCGCCACTTCCCCGACAGCACCCTATGGCTGACCGGCG
GCGCGGTCCGGGGCGATACCCCCAATTCCGAAGTCCTCTACCGACTGATGGGCGAGGTGGGCCTCGATGCCGGCGCCGTC
GAGCGCCTGGCGGAACCGCGCAATACCGCCGAGGAGGCCCAGGCGGTGGCTGAGCGGCTGACCGACGATGCCGGCACGAT
CATCCTGGTGACCGAGGCCTCGCACATGCCGCGGGCCATGGGGCTGTTCCGGGGGCAGGAGCTGGAGCCGATCCCGGCCC
CTACGCGGCACCGCGTGCGGGCCCACGAGCCCGATGCCGGGACGCACCCGGGCCACGGGGTGCGTCCCTCGGTGCACGCC
CTGCACATGACCAAGCGCGCCTTCCACGAGTACCTGGGGATGGCCTGGGGGCGGATGCGCGGGCAGATCCCCGCCGCCGA
GGACTGA

Upstream 100 bases:

>100_bases
TCGGCAGCCTGGAGGGGGCCCGACAGGTTCGCTGGTCGCTTGACGTGGATCCGGTGGAGATGGTCTGAATCCCGATTTCC
GGGACAGGGAGGGTCGAGAC

Downstream 100 bases:

>100_bases
CGGCTCAGGCGCGCTCGATCTGGTGCTGCGAGACGGTCAGGGTGGTGTGCTGCCCGGCGACGTCGAGCAGGATCATGACG
CGCTCGTCGCTGCGAGAGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MFVISKLAGAVLMPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRLLAPLEQRYPALLDPAGVAET
QGPVTDIVVLGHGHRLDPQLPITAQANADGVTRVLEGVRLQRHFPDSTLWLTGGAVRGDTPNSEVLYRLMGEVGLDAGAV
ERLAEPRNTAEEAQAVAERLTDDAGTIILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHA
LHMTKRAFHEYLGMAWGRMRGQIPAAED

Sequences:

>Translated_268_residues
MFVISKLAGAVLMPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRLLAPLEQRYPALLDPAGVAET
QGPVTDIVVLGHGHRLDPQLPITAQANADGVTRVLEGVRLQRHFPDSTLWLTGGAVRGDTPNSEVLYRLMGEVGLDAGAV
ERLAEPRNTAEEAQAVAERLTDDAGTIILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHA
LHMTKRAFHEYLGMAWGRMRGQIPAAED
>Mature_268_residues
MFVISKLAGAVLMPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRLLAPLEQRYPALLDPAGVAET
QGPVTDIVVLGHGHRLDPQLPITAQANADGVTRVLEGVRLQRHFPDSTLWLTGGAVRGDTPNSEVLYRLMGEVGLDAGAV
ERLAEPRNTAEEAQAVAERLTDDAGTIILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHA
LHMTKRAFHEYLGMAWGRMRGQIPAAED

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787150, Length=209, Percent_Identity=33.9712918660287, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003848
- InterPro:   IPR014729 [H]

Pfam domain/function: PF02698 DUF218 [H]

EC number: NA

Molecular weight: Translated: 29037; Mature: 29037

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVISKLAGAVLMPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LAPLEQRYPALLDPAGVAETQGPVTDIVVLGHGHRLDPQLPITAQANADGVTRVLEGVRL
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
QRHFPDSTLWLTGGAVRGDTPNSEVLYRLMGEVGLDAGAVERLAEPRNTAEEAQAVAERL
HHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
TDDAGTIILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHA
CCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LHMTKRAFHEYLGMAWGRMRGQIPAAED
HHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MFVISKLAGAVLMPLSLLVLAGILGVILLLTRYWRWGRGVLIGTVVALYLASWEPTASRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
LAPLEQRYPALLDPAGVAETQGPVTDIVVLGHGHRLDPQLPITAQANADGVTRVLEGVRL
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHHHHH
QRHFPDSTLWLTGGAVRGDTPNSEVLYRLMGEVGLDAGAVERLAEPRNTAEEAQAVAERL
HHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHH
TDDAGTIILVTEASHMPRAMGLFRGQELEPIPAPTRHRVRAHEPDAGTHPGHGVRPSVHA
CCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LHMTKRAFHEYLGMAWGRMRGQIPAAED
HHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]