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The map label for this gene is yfiH [C]

Identifier: 121999013

GI number: 121999013

Start: 2449605

End: 2450348

Strand: Reverse

Name: yfiH [C]

Synonym: Hhal_2234

Alternate gene names: 121999013

Gene position: 2450348-2449605 (Counterclockwise)

Preceding gene: 121999014

Following gene: 121999012

Centisome position: 91.48

GC content: 71.91

Gene sequence:

>744_bases
ATGGCTGAGTGCCCCGTTCTGGCGCCGCAGTGGCCCGTGCCGGATGGTGTTCGGGCCCTGACCACAGTGCGCTCCGGCGG
TCACAGCGCTGCGCCCTGGGCGAGTTTCAATCTGGCCACGCATACCGGGGACGATCCCGCGGCGGTGGCTGCTAACCGCC
GCCTGCTGCGCGATTGCGCCGAATTGCCGGCCGACCCAGTGTGGCTCGAGCAGGTCCACGGGGCCGAGGTGGTCGCGGCC
CACCGGGTGGCACGCGGAGTCCGAGCCGATGCGGCCTGGACCGACCGCGCCGGGGTGGTCTGTGCCGTGCTCACCGCGGA
CTGCCTGCCGGTGCTCTTCGCCGCCCGGGACGCTCAGGTCGTGGCCGCCGCCCACGCTGGTTGGCGCGGTCTGGCCGGGG
GTGTGCTCGAGGCCGTGGTCGCGGTGCTGCCAGTGCCTGCCGCTGAGCTCCACGCTTGGTTGGGGCCGGCCATCGGCCCG
ACCGCTTTCGAAGTGGGGCCAGAAGTGGTCGAGGCGTTCACCGCCCGAGATCCCGGTGCTGCAGAAGGTTTTATCCCCGG
CGCCGCGAATCGCTGGTACGCTGACCTCTACCGTCTGGCACGGCGCCGCCTGCAGGCGGCCGGAGTGGCCGCGGTACACG
GCGGAGGCTGGTGCACGTACACGGATCGGGCGCGCTTCTTCTCCCATCGCCGGGATGGACCGACCGGCCGGATGGCAAGC
CTGGTCTACCGAGAGGAGCCGTGA

Upstream 100 bases:

>100_bases
GCTCGGCATCTGCGCCTTGAGCACCCGCGCACCGGAGAGGCGATGCACTGGGAAGCGCCGCCGCCAGACGACTGGGAGCG
CCTCTTGGAGGTCCTGCGCC

Downstream 100 bases:

>100_bases
GCATGGTCGAGGAGCAGCGCGTCGCCGATTGCGTCCTGGTGGTGGAGGATAGCCGTGCCGTGGCCGGCTGGCTGGCCGGG
CGCATCGAGGACGCCCTGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAECPVLAPQWPVPDGVRALTTVRSGGHSAAPWASFNLATHTGDDPAAVAANRRLLRDCAELPADPVWLEQVHGAEVVAA
HRVARGVRADAAWTDRAGVVCAVLTADCLPVLFAARDAQVVAAAHAGWRGLAGGVLEAVVAVLPVPAAELHAWLGPAIGP
TAFEVGPEVVEAFTARDPGAAEGFIPGAANRWYADLYRLARRRLQAAGVAAVHGGGWCTYTDRARFFSHRRDGPTGRMAS
LVYREEP

Sequences:

>Translated_247_residues
MAECPVLAPQWPVPDGVRALTTVRSGGHSAAPWASFNLATHTGDDPAAVAANRRLLRDCAELPADPVWLEQVHGAEVVAA
HRVARGVRADAAWTDRAGVVCAVLTADCLPVLFAARDAQVVAAAHAGWRGLAGGVLEAVVAVLPVPAAELHAWLGPAIGP
TAFEVGPEVVEAFTARDPGAAEGFIPGAANRWYADLYRLARRRLQAAGVAAVHGGGWCTYTDRARFFSHRRDGPTGRMAS
LVYREEP
>Mature_246_residues
AECPVLAPQWPVPDGVRALTTVRSGGHSAAPWASFNLATHTGDDPAAVAANRRLLRDCAELPADPVWLEQVHGAEVVAAH
RVARGVRADAAWTDRAGVVCAVLTADCLPVLFAARDAQVVAAAHAGWRGLAGGVLEAVVAVLPVPAAELHAWLGPAIGPT
AFEVGPEVVEAFTARDPGAAEGFIPGAANRWYADLYRLARRRLQAAGVAAVHGGGWCTYTDRARFFSHRRDGPTGRMASL
VYREEP

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Homo sapiens, GI190194374, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=6e-13,
Organism=Homo sapiens, GI190194372, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=6e-13,
Organism=Escherichia coli, GI1788945, Length=239, Percent_Identity=51.4644351464435, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 26015; Mature: 25883

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAECPVLAPQWPVPDGVRALTTVRSGGHSAAPWASFNLATHTGDDPAAVAANRRLLRDCA
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
ELPADPVWLEQVHGAEVVAAHRVARGVRADAAWTDRAGVVCAVLTADCLPVLFAARDAQV
HCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
VAAAHAGWRGLAGGVLEAVVAVLPVPAAELHAWLGPAIGPTAFEVGPEVVEAFTARDPGA
EHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCC
AEGFIPGAANRWYADLYRLARRRLQAAGVAAVHGGGWCTYTDRARFFSHRRDGPTGRMAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECHHHHHHHHCCCCCCCHHHH
LVYREEP
HEECCCC
>Mature Secondary Structure 
AECPVLAPQWPVPDGVRALTTVRSGGHSAAPWASFNLATHTGDDPAAVAANRRLLRDCA
CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
ELPADPVWLEQVHGAEVVAAHRVARGVRADAAWTDRAGVVCAVLTADCLPVLFAARDAQV
HCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCE
VAAAHAGWRGLAGGVLEAVVAVLPVPAAELHAWLGPAIGPTAFEVGPEVVEAFTARDPGA
EHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHCCHHHHHHHHCCCCCC
AEGFIPGAANRWYADLYRLARRRLQAAGVAAVHGGGWCTYTDRARFFSHRRDGPTGRMAS
CCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECHHHHHHHHCCCCCCCHHHH
LVYREEP
HEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043; 8097014 [H]