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The map label for this gene is 121998999

Identifier: 121998999

GI number: 121998999

Start: 2434264

End: 2435148

Strand: Reverse

Name: 121998999

Synonym: Hhal_2220

Alternate gene names: NA

Gene position: 2435148-2434264 (Counterclockwise)

Preceding gene: 121999000

Following gene: 121998987

Centisome position: 90.92

GC content: 63.39

Gene sequence:

>885_bases
ATGGACGGCGGCAGACAGCCGATACGCGACGGCGACTACCTGCTTTTGGAGTGGGTGACCGATACGTCTGCCGGTTCCAT
CACCGGCACCACGATGGCCATCGAACGGCAGGACACCGCGGGCGATGACCAGTATCTGTTGCGGGTCGTCCGCAAGACAG
AAGACGGTCGGTATATCCTCCGTGCCAACAACCCGGAGTATCCGGACCTGGAAGCGGACGACGCCATGCGCACCTTCGCT
CGGCTGCGGGCTGTGCTCGATCCGCTGGCGGTGGCGGTGGGCCAGTCATTCCAGCGGCAGGAGATCCCGCAGCTGTTCGG
GGTGGAGTACAGTGCCGGCGCCTGGCAATCCGGCCATGTCGTGTTGCCCGATTCGCGCACCCACATTCTGCTGGTCACTT
TGAACAAGCAGGGGAAGGGTGCCGACTACCGCTACCTGGACTACTTCATCGACGAGCGAACCTTCCACTGGCAGAGCCAG
AACCAGACGACTCCGGAGAGCAAGCGTGGCCGGGAACTCATCGAGCACCGCCAGCGCGGTATCGATGTCCACCTCTTCGT
GCGCGACCACAAGCTGGGGCCCGATGGCCGCGCTGCGCCGTTCCGCTACACATTGCGGGAGCCTATGATGACCACGTCTG
ACGATATGACTCCCTTCGGCTATCTAGAAGCGCAACAGGACCGTGATCCTTTGGCGCATCTGGAGGTCGTCGATCCGATC
CGTTCCGGGATTCCGGTCGCGACCGCGGAGGAGATGCTTCACGCCGTCGGGCTGTCTCTCAAAGAACTCGCCGATCTCTC
GGGCCGCGGTGCTGCGTGTGCGCTCGCAGATCGTCGCAGAGGCGTCGAACCTGTTGCTCAATCCCCCGCATCCGGCCGTG
TGTGA

Upstream 100 bases:

>100_bases
CAATTGCGTGCGACGCGCGCCGAGGGCCATCAACGTGGGCTGGTGGTAAGGCCGGCTTGACCCGGGGCGCCATTTTGTCG
CCCGCGCCGTGGGCCACTCC

Downstream 100 bases:

>100_bases
TCTGCCTGAATCCACCACACGGCCCTTCACCTTCGATCCCCGCTTGTTCGATCCCGCAGCGCGATAAGCCGCTCGCCACG
ACCGACCCTGCGTCACACCA

Product: hypothetical protein

Products: NA

Alternate protein names: Helicase-Related Protein; Transposase IS4 Family Protein; Helicase; ATP-Dependent RNA Helicase; Type III Restriction Res Subunit

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MDGGRQPIRDGDYLLLEWVTDTSAGSITGTTMAIERQDTAGDDQYLLRVVRKTEDGRYILRANNPEYPDLEADDAMRTFA
RLRAVLDPLAVAVGQSFQRQEIPQLFGVEYSAGAWQSGHVVLPDSRTHILLVTLNKQGKGADYRYLDYFIDERTFHWQSQ
NQTTPESKRGRELIEHRQRGIDVHLFVRDHKLGPDGRAAPFRYTLREPMMTTSDDMTPFGYLEAQQDRDPLAHLEVVDPI
RSGIPVATAEEMLHAVGLSLKELADLSGRGAACALADRRRGVEPVAQSPASGRV

Sequences:

>Translated_294_residues
MDGGRQPIRDGDYLLLEWVTDTSAGSITGTTMAIERQDTAGDDQYLLRVVRKTEDGRYILRANNPEYPDLEADDAMRTFA
RLRAVLDPLAVAVGQSFQRQEIPQLFGVEYSAGAWQSGHVVLPDSRTHILLVTLNKQGKGADYRYLDYFIDERTFHWQSQ
NQTTPESKRGRELIEHRQRGIDVHLFVRDHKLGPDGRAAPFRYTLREPMMTTSDDMTPFGYLEAQQDRDPLAHLEVVDPI
RSGIPVATAEEMLHAVGLSLKELADLSGRGAACALADRRRGVEPVAQSPASGRV
>Mature_294_residues
MDGGRQPIRDGDYLLLEWVTDTSAGSITGTTMAIERQDTAGDDQYLLRVVRKTEDGRYILRANNPEYPDLEADDAMRTFA
RLRAVLDPLAVAVGQSFQRQEIPQLFGVEYSAGAWQSGHVVLPDSRTHILLVTLNKQGKGADYRYLDYFIDERTFHWQSQ
NQTTPESKRGRELIEHRQRGIDVHLFVRDHKLGPDGRAAPFRYTLREPMMTTSDDMTPFGYLEAQQDRDPLAHLEVVDPI
RSGIPVATAEEMLHAVGLSLKELADLSGRGAACALADRRRGVEPVAQSPASGRV

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32917; Mature: 32917

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGGRQPIRDGDYLLLEWVTDTSAGSITGTTMAIERQDTAGDDQYLLRVVRKTEDGRYIL
CCCCCCCCCCCCEEEEEEEECCCCCCEECEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE
RANNPEYPDLEADDAMRTFARLRAVLDPLAVAVGQSFQRQEIPQLFGVEYSAGAWQSGHV
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCE
VLPDSRTHILLVTLNKQGKGADYRYLDYFIDERTFHWQSQNQTTPESKRGRELIEHRQRG
EECCCCCEEEEEEECCCCCCCCEEHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
IDVHLFVRDHKLGPDGRAAPFRYTLREPMMTTSDDMTPFGYLEAQQDRDPLAHLEVVDPI
CEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHH
RSGIPVATAEEMLHAVGLSLKELADLSGRGAACALADRRRGVEPVAQSPASGRV
HCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHCCCCCCCC
>Mature Secondary Structure
MDGGRQPIRDGDYLLLEWVTDTSAGSITGTTMAIERQDTAGDDQYLLRVVRKTEDGRYIL
CCCCCCCCCCCCEEEEEEEECCCCCCEECEEEEEECCCCCCCHHHHHHHHHHCCCCCEEE
RANNPEYPDLEADDAMRTFARLRAVLDPLAVAVGQSFQRQEIPQLFGVEYSAGAWQSGHV
ECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCE
VLPDSRTHILLVTLNKQGKGADYRYLDYFIDERTFHWQSQNQTTPESKRGRELIEHRQRG
EECCCCCEEEEEEECCCCCCCCEEHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
IDVHLFVRDHKLGPDGRAAPFRYTLREPMMTTSDDMTPFGYLEAQQDRDPLAHLEVVDPI
CEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHH
RSGIPVATAEEMLHAVGLSLKELADLSGRGAACALADRRRGVEPVAQSPASGRV
HCCCCCHHHHHHHHHHCCCHHHHHHCCCCCCEEEEHHHHCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA