| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is pabB [H]
Identifier: 121998987
GI number: 121998987
Start: 2422735
End: 2424120
Strand: Reverse
Name: pabB [H]
Synonym: Hhal_2208
Alternate gene names: 121998987
Gene position: 2424120-2422735 (Counterclockwise)
Preceding gene: 121998999
Following gene: 121998985
Centisome position: 90.5
GC content: 71.72
Gene sequence:
>1386_bases GTGTCCTTACCCCTGCAATCTCGATCCCTGCCGTACATCGGTGACGGGGCAACGGCGATGCGCGTCCTGGGGGGCGAACC GTGGTCAGCGTGGCTCGACTCGGGCCACGGCGGCTGTGCCGGGGCGCGTTACGACATCCTCGTCGCCCGGCCGACGGTCA CGCTGATCGCAGCCGGCGGGCAGACCACCATCCGGCGCGGCGAGCGGGTCGAGCGCCGGCACGGCGATCCGCTGGCCCAC CTGGCTGCTGAGCTCGATGCCCTCGGCCCGCTCCCCGTTGACCCTCGGTGGCCGTTCACCGGCGGCGCGGTGGGGTATTT CGGCTACGACCTGGGGCGCCGCCTGATGGGGGTTCCGGGTGCCGATCCCGCGTTGCCCGAGATGGCCGTGGGGATCTACG AGCACGCGGTAATCACCGACCATCGCCACGAATGCAGCACTGCGGTGGGGCGACGCCTGGATGAGGCCTGGCTGGCGGAC GTGGCCTGCCGCCGGGAGACGGGGGCGAGACCGCAGCCGTGGTCGACCGCAGGTCCGGTCCTCCGTGAACCGGACGCCGA TGGGTACGCGGCCGCTTTCCGTCGGGTGCAGGGGTATCTGCACGCCGGTGACTGCTACCAGGTCAATCTGGCCCGGCGCT TCTCGGTGCCCTGCTGCGGGGATCCCCAGGCGGCGTACCTCGCCCTGCGCGCAGCCTCGTCGGCGCCCTTTGCGGCGTGG CTCCGCTTCCCCGGGGGCGATGTGCTCAGCCTCTCGCCGGAGCGCTTCTTGCACATCGACGGCGACGGGCGGGTGACCAC CGAGCCGATCAAGGGCACCCGGCCGCGGTTCACCGATCCCGCCGAGGATGAGGCGGCCCGCCGGGACCTGCTGGGCAGCG CCAAGGATCGGGCCGAGAACGTGATGATCGTCGATCTGCTGCGCAACGACCTGGGCAAGGGGTGCGAGGTGGGCAGCGTG CGGGTGCCGTCGCTCTGCCGCGCCGAGCGCTTTGCCAGCGTGCACCACTTGGTCAGTACTGTCACCGGGCGCCTGGCCCC GGGGCGGCGCGCCACCGATCTGCTGCGCGATTGCCTGCCCGGTGGCTCCATCACCGGGGCGCCGAAGCGCCGTGCCATGG AGATCATCACCGAGCTCGAGCCGGGACCGCGCGGGGTCTACTGTGGGGCCATCGGTTACCTGGGGCTGGATGGCCGCATG GACACCAGCATTGCCATTCGCACCGCGACGTGCAGCGACGGCAGTATGACCTACTGGGCCGGTGGCGGGGTGGTGGCGGA CTCCACCGCTGCCGCCGAGCTCCAGGAGACGGAAGACAAGGCCGCTGGTTTTCTGTCGCTGGCCGAGGGCGGCCAGGCCG CGGCAGGGGTCAGGCCTCGCCGCTGA
Upstream 100 bases:
>100_bases ATGCCGCATGGCCTTGGTCGGTCATGATTCTCCTCCGTCGACCGTAGGTTTTTTTATCGTTGCGAGGTTAAACGATCTGA GCTGTCCGGAGCACCATTAC
Downstream 100 bases:
>100_bases GCAGTTGTGCGAACGCCGCCAGGGCCTCGTACTCCTCACGGCACGCGTTGCCGATGCGTTCGAGCTTGCCCTGCGGGATG GGCGGGGCGTCGGCGCACTG
Product: para-aminobenzoate synthase subunit I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MSLPLQSRSLPYIGDGATAMRVLGGEPWSAWLDSGHGGCAGARYDILVARPTVTLIAAGGQTTIRRGERVERRHGDPLAH LAAELDALGPLPVDPRWPFTGGAVGYFGYDLGRRLMGVPGADPALPEMAVGIYEHAVITDHRHECSTAVGRRLDEAWLAD VACRRETGARPQPWSTAGPVLREPDADGYAAAFRRVQGYLHAGDCYQVNLARRFSVPCCGDPQAAYLALRAASSAPFAAW LRFPGGDVLSLSPERFLHIDGDGRVTTEPIKGTRPRFTDPAEDEAARRDLLGSAKDRAENVMIVDLLRNDLGKGCEVGSV RVPSLCRAERFASVHHLVSTVTGRLAPGRRATDLLRDCLPGGSITGAPKRRAMEIITELEPGPRGVYCGAIGYLGLDGRM DTSIAIRTATCSDGSMTYWAGGGVVADSTAAAELQETEDKAAGFLSLAEGGQAAAGVRPRR
Sequences:
>Translated_461_residues MSLPLQSRSLPYIGDGATAMRVLGGEPWSAWLDSGHGGCAGARYDILVARPTVTLIAAGGQTTIRRGERVERRHGDPLAH LAAELDALGPLPVDPRWPFTGGAVGYFGYDLGRRLMGVPGADPALPEMAVGIYEHAVITDHRHECSTAVGRRLDEAWLAD VACRRETGARPQPWSTAGPVLREPDADGYAAAFRRVQGYLHAGDCYQVNLARRFSVPCCGDPQAAYLALRAASSAPFAAW LRFPGGDVLSLSPERFLHIDGDGRVTTEPIKGTRPRFTDPAEDEAARRDLLGSAKDRAENVMIVDLLRNDLGKGCEVGSV RVPSLCRAERFASVHHLVSTVTGRLAPGRRATDLLRDCLPGGSITGAPKRRAMEIITELEPGPRGVYCGAIGYLGLDGRM DTSIAIRTATCSDGSMTYWAGGGVVADSTAAAELQETEDKAAGFLSLAEGGQAAAGVRPRR >Mature_460_residues SLPLQSRSLPYIGDGATAMRVLGGEPWSAWLDSGHGGCAGARYDILVARPTVTLIAAGGQTTIRRGERVERRHGDPLAHL AAELDALGPLPVDPRWPFTGGAVGYFGYDLGRRLMGVPGADPALPEMAVGIYEHAVITDHRHECSTAVGRRLDEAWLADV ACRRETGARPQPWSTAGPVLREPDADGYAAAFRRVQGYLHAGDCYQVNLARRFSVPCCGDPQAAYLALRAASSAPFAAWL RFPGGDVLSLSPERFLHIDGDGRVTTEPIKGTRPRFTDPAEDEAARRDLLGSAKDRAENVMIVDLLRNDLGKGCEVGSVR VPSLCRAERFASVHHLVSTVTGRLAPGRRATDLLRDCLPGGSITGAPKRRAMEIITELEPGPRGVYCGAIGYLGLDGRMD TSIAIRTATCSDGSMTYWAGGGVVADSTAAAELQETEDKAAGFLSLAEGGQAAAGVRPRR
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=435, Percent_Identity=48.2758620689655, Blast_Score=367, Evalue=1e-103, Organism=Escherichia coli, GI1787518, Length=383, Percent_Identity=33.1592689295039, Blast_Score=168, Evalue=5e-43, Organism=Escherichia coli, GI1786809, Length=267, Percent_Identity=25.0936329588015, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87082077, Length=290, Percent_Identity=26.551724137931, Blast_Score=74, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6320935, Length=411, Percent_Identity=31.8734793187348, Blast_Score=190, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6324361, Length=396, Percent_Identity=29.5454545454545, Blast_Score=151, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 49060; Mature: 48929
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPLQSRSLPYIGDGATAMRVLGGEPWSAWLDSGHGGCAGARYDILVARPTVTLIAAGG CCCCCCCCCCCEECCCHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCC QTTIRRGERVERRHGDPLAHLAAELDALGPLPVDPRWPFTGGAVGYFGYDLGRRLMGVPG CHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC ADPALPEMAVGIYEHAVITDHRHECSTAVGRRLDEAWLADVACRRETGARPQPWSTAGPV CCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LREPDADGYAAAFRRVQGYLHAGDCYQVNLARRFSVPCCGDPQAAYLALRAASSAPFAAW CCCCCCCHHHHHHHHHHCEEECCCEEEEEEHHHCCCCCCCCCHHHEEEEECCCCCCCEEE LRFPGGDVLSLSPERFLHIDGDGRVTTEPIKGTRPRFTDPAEDEAARRDLLGSAKDRAEN EECCCCCEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCC VMIVDLLRNDLGKGCEVGSVRVPSLCRAERFASVHHLVSTVTGRLAPGRRATDLLRDCLP EEEHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GGSITGAPKRRAMEIITELEPGPRGVYCGAIGYLGLDGRMDTSIAIRTATCSDGSMTYWA CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEE GGGVVADSTAAAELQETEDKAAGFLSLAEGGQAAAGVRPRR CCCEEECCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC >Mature Secondary Structure SLPLQSRSLPYIGDGATAMRVLGGEPWSAWLDSGHGGCAGARYDILVARPTVTLIAAGG CCCCCCCCCCEECCCHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCC QTTIRRGERVERRHGDPLAHLAAELDALGPLPVDPRWPFTGGAVGYFGYDLGRRLMGVPG CHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC ADPALPEMAVGIYEHAVITDHRHECSTAVGRRLDEAWLADVACRRETGARPQPWSTAGPV CCCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC LREPDADGYAAAFRRVQGYLHAGDCYQVNLARRFSVPCCGDPQAAYLALRAASSAPFAAW CCCCCCCHHHHHHHHHHCEEECCCEEEEEEHHHCCCCCCCCCHHHEEEEECCCCCCCEEE LRFPGGDVLSLSPERFLHIDGDGRVTTEPIKGTRPRFTDPAEDEAARRDLLGSAKDRAEN EECCCCCEEEECCCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCC VMIVDLLRNDLGKGCEVGSVRVPSLCRAERFASVHHLVSTVTGRLAPGRRATDLLRDCLP EEEHHHHHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC GGSITGAPKRRAMEIITELEPGPRGVYCGAIGYLGLDGRMDTSIAIRTATCSDGSMTYWA CCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECCCCCEEEEE GGGVVADSTAAAELQETEDKAAGFLSLAEGGQAAAGVRPRR CCCEEECCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]