| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is pgi1 [H]
Identifier: 121998956
GI number: 121998956
Start: 2387835
End: 2389451
Strand: Reverse
Name: pgi1 [H]
Synonym: Hhal_2177
Alternate gene names: 121998956
Gene position: 2389451-2387835 (Counterclockwise)
Preceding gene: 121998957
Following gene: 121998955
Centisome position: 89.21
GC content: 70.5
Gene sequence:
>1617_bases ATGACGACTGCGCTGACGCACTCCCCGGTCTGGCAGGAACTGCTTGGCCACGATGACACCGAACACGCAGGTGCGCTCCT GGGGGCCGATCCGGGGCGCGTCGAGCGCTACTGCCTGCACCACGAAGACCTGCGCGTCGATCTCTCCCGGCACCCGGTGA CCGATTCCACCTGGGAGCGGCTGCTGCGCCTAGCCGAGGAGCGCGGCGTCCCCGGGCGCATCGAGGCGTTGTTCTCGGGG GCGTCCGTCAACGAGTCCGAGGGGCGGCCTGCGCTGCATACGGCGCTGCGCAGCAGGCCCGATGCCTCCATCCATGTGGA TGGCGAAGACGTGATCCCGGCCGTCTACGAGGAGCTGCAGCGCATGGCTGCCTTCGTCGAGGCCCTGCGCAGTGGCGATG TGCGCGGCTACGACGGTCGGCCCCTGCGCCACGTGGTGAACATCGGCATCGGTGGCTCGGAGGCCGGCGTCACCATGGCC CATCAGGCCCTGGCCGACGGTGATGAACCCCTGCGGCTCCATACCGTATCCGGGGTGGACGGGCGCGAGCTGGCCGCTGT GTGGGGGCGGATCGACCCGGCCGAAACCCTCTTCTGCGTGGCCTCCAAGTCCTTCTCCACCCTGGAGACCCTCACCAATG CCCGGACCGCGTGGGCGTGGCTGGAGGCGGAGGCCGGGCGGCCGGTGCCAGAGCAGTTCGTGGGCATCTCGGCGAACGAG TCGGCCATGGCCGATTTCGGGATTCCCGCCGAGCGGCGGTTCCGGATCTGGGAGTGGGTCGGTGGTCGCTACTCCCTGCC GTCAACCATGGGGCTGCCGCTGGCGGCGGTGATCGGTATGGAGCGCTTCAACGAGCTGCGCCGCGGCATGCGTGCCATGG ATGAGCACTTCCGGAGCGCGCCGGCGGCGCAGAATATCCCTTTGCTGCTCGGGCTCCTCGGGGTCTGGCAGATCAGCCTC CGCGGCGCCACCGGGCACGTCGTGTTGCCGTATCACCCGGGGCTGCGCCGGCTTCCGGCCTACCTACAGCAGCTGGACAT GGAAAGCCTGGGCAAGTCGGTTACCCGCGATGGGCAGCCGGTGGACTACCCCACCGGGACCAGCTGCTGGGGCGAGGTGG GGATCAACGGCCAGCACTCGTTCTTTCAGTGGCTGCATCAGGGCACCGGTCGGGTCATCGCCGAGTTCCTCGTGCCGGTG GAGGAGGGCGGCCTGCCCGAGCGGCACGCCGGGCTGAACCTGGCGAGCGCCCTGGGCCAGGTCCAGGCGCTGTGCCAGGG GCAGGCGCCGCAGGGGAGCGGGCCGGAGGCCGAGCACCACCGCTACGAGGGCGGCCGACCGGTGACGCTCATCCTTTTCC GGCGGCTCGACGCCTATACACTCGGGCGCCTGCTGGCCCTGCACGAGCATCGCGTGTTCGTCCAGGCGAGCCTTTGGGGG ATCAATCCCTTCGATCAGTGGGGCGTCGAGCTGGGCAAGCGGGTGGCCAAGGGGTTGGCCCCGGTTGCCCGCGGCGAGGC GCCACCGCCCGCCGAGGCGGATGCCGCGACCCGTCAGGCCCTGCGTTGGGCGGGGTGTTGGGGCGCTGGCGAGTCGTCCG ACGGGACGGGTGTTTGA
Upstream 100 bases:
>100_bases TTCGTCGCCCCCTCTGAGCGCCGGTCGTCCCGAGGCTTGAAACCGGCGGGGGCTGCCTCGATGACCGAGGGTGTGTTGGG CGACAGAGGATGGACTGTAG
Downstream 100 bases:
>100_bases CATCTCTTTTGAGCGCTTCTAAATTAGAGCCTAAAGATTAGAAGCGTTCAAAGGTGTAAGCATGAAACCCGCCGCTGCCC TCCGCAACCGGATCGACCGC
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI 1; Phosphoglucose isomerase 1; PGI 1; Phosphohexose isomerase 1; PHI 1 [H]
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MTTALTHSPVWQELLGHDDTEHAGALLGADPGRVERYCLHHEDLRVDLSRHPVTDSTWERLLRLAEERGVPGRIEALFSG ASVNESEGRPALHTALRSRPDASIHVDGEDVIPAVYEELQRMAAFVEALRSGDVRGYDGRPLRHVVNIGIGGSEAGVTMA HQALADGDEPLRLHTVSGVDGRELAAVWGRIDPAETLFCVASKSFSTLETLTNARTAWAWLEAEAGRPVPEQFVGISANE SAMADFGIPAERRFRIWEWVGGRYSLPSTMGLPLAAVIGMERFNELRRGMRAMDEHFRSAPAAQNIPLLLGLLGVWQISL RGATGHVVLPYHPGLRRLPAYLQQLDMESLGKSVTRDGQPVDYPTGTSCWGEVGINGQHSFFQWLHQGTGRVIAEFLVPV EEGGLPERHAGLNLASALGQVQALCQGQAPQGSGPEAEHHRYEGGRPVTLILFRRLDAYTLGRLLALHEHRVFVQASLWG INPFDQWGVELGKRVAKGLAPVARGEAPPPAEADAATRQALRWAGCWGAGESSDGTGV
Sequences:
>Translated_538_residues MTTALTHSPVWQELLGHDDTEHAGALLGADPGRVERYCLHHEDLRVDLSRHPVTDSTWERLLRLAEERGVPGRIEALFSG ASVNESEGRPALHTALRSRPDASIHVDGEDVIPAVYEELQRMAAFVEALRSGDVRGYDGRPLRHVVNIGIGGSEAGVTMA HQALADGDEPLRLHTVSGVDGRELAAVWGRIDPAETLFCVASKSFSTLETLTNARTAWAWLEAEAGRPVPEQFVGISANE SAMADFGIPAERRFRIWEWVGGRYSLPSTMGLPLAAVIGMERFNELRRGMRAMDEHFRSAPAAQNIPLLLGLLGVWQISL RGATGHVVLPYHPGLRRLPAYLQQLDMESLGKSVTRDGQPVDYPTGTSCWGEVGINGQHSFFQWLHQGTGRVIAEFLVPV EEGGLPERHAGLNLASALGQVQALCQGQAPQGSGPEAEHHRYEGGRPVTLILFRRLDAYTLGRLLALHEHRVFVQASLWG INPFDQWGVELGKRVAKGLAPVARGEAPPPAEADAATRQALRWAGCWGAGESSDGTGV >Mature_537_residues TTALTHSPVWQELLGHDDTEHAGALLGADPGRVERYCLHHEDLRVDLSRHPVTDSTWERLLRLAEERGVPGRIEALFSGA SVNESEGRPALHTALRSRPDASIHVDGEDVIPAVYEELQRMAAFVEALRSGDVRGYDGRPLRHVVNIGIGGSEAGVTMAH QALADGDEPLRLHTVSGVDGRELAAVWGRIDPAETLFCVASKSFSTLETLTNARTAWAWLEAEAGRPVPEQFVGISANES AMADFGIPAERRFRIWEWVGGRYSLPSTMGLPLAAVIGMERFNELRRGMRAMDEHFRSAPAAQNIPLLLGLLGVWQISLR GATGHVVLPYHPGLRRLPAYLQQLDMESLGKSVTRDGQPVDYPTGTSCWGEVGINGQHSFFQWLHQGTGRVIAEFLVPVE EGGLPERHAGLNLASALGQVQALCQGQAPQGSGPEAEHHRYEGGRPVTLILFRRLDAYTLGRLLALHEHRVFVQASLWGI NPFDQWGVELGKRVAKGLAPVARGEAPPPAEADAATRQALRWAGCWGAGESSDGTGV
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=547, Percent_Identity=40.9506398537477, Blast_Score=407, Evalue=1e-114, Organism=Homo sapiens, GI296080693, Length=542, Percent_Identity=38.7453874538745, Blast_Score=362, Evalue=1e-100, Organism=Escherichia coli, GI1790457, Length=543, Percent_Identity=39.7790055248619, Blast_Score=403, Evalue=1e-113, Organism=Caenorhabditis elegans, GI71996708, Length=527, Percent_Identity=40.7969639468691, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI71996703, Length=527, Percent_Identity=40.7969639468691, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6319673, Length=465, Percent_Identity=41.7204301075269, Blast_Score=369, Evalue=1e-103, Organism=Drosophila melanogaster, GI24651916, Length=527, Percent_Identity=40.0379506641366, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI24651914, Length=527, Percent_Identity=40.0379506641366, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI17737445, Length=527, Percent_Identity=40.0379506641366, Blast_Score=386, Evalue=1e-107,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 58508; Mature: 58377
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2 ; PS00237 G_PROTEIN_RECEP_F1_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTALTHSPVWQELLGHDDTEHAGALLGADPGRVERYCLHHEDLRVDLSRHPVTDSTWER CCCCCCCCHHHHHHHCCCCCHHCCEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHH LLRLAEERGVPGRIEALFSGASVNESEGRPALHTALRSRPDASIHVDGEDVIPAVYEELQ HHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH RMAAFVEALRSGDVRGYDGRPLRHVVNIGIGGSEAGVTMAHQALADGDEPLRLHTVSGVD HHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC GRELAAVWGRIDPAETLFCVASKSFSTLETLTNARTAWAWLEAEAGRPVPEQFVGISANE CHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHCCHHHHEEEECCCCCCCHHHHCCCCCCC SAMADFGIPAERRFRIWEWVGGRYSLPSTMGLPLAAVIGMERFNELRRGMRAMDEHFRSA CHHHHCCCCHHHHEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAAQNIPLLLGLLGVWQISLRGATGHVVLPYHPGLRRLPAYLQQLDMESLGKSVTRDGQP CCCCCCHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCC VDYPTGTSCWGEVGINGQHSFFQWLHQGTGRVIAEFLVPVEEGGLPERHAGLNLASALGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHH VQALCQGQAPQGSGPEAEHHRYEGGRPVTLILFRRLDAYTLGRLLALHEHRVFVQASLWG HHHHHCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEEEEEECC INPFDQWGVELGKRVAKGLAPVARGEAPPPAEADAATRQALRWAGCWGAGESSDGTGV CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure TTALTHSPVWQELLGHDDTEHAGALLGADPGRVERYCLHHEDLRVDLSRHPVTDSTWER CCCCCCCHHHHHHHCCCCCHHCCEEECCCCHHHHHHHHCCCCCEEECCCCCCCHHHHHH LLRLAEERGVPGRIEALFSGASVNESEGRPALHTALRSRPDASIHVDGEDVIPAVYEELQ HHHHHHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHH RMAAFVEALRSGDVRGYDGRPLRHVVNIGIGGSEAGVTMAHQALADGDEPLRLHTVSGVD HHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC GRELAAVWGRIDPAETLFCVASKSFSTLETLTNARTAWAWLEAEAGRPVPEQFVGISANE CHHHHHHHCCCCHHHHEEEECCCCHHHHHHHHCCHHHHEEEECCCCCCCHHHHCCCCCCC SAMADFGIPAERRFRIWEWVGGRYSLPSTMGLPLAAVIGMERFNELRRGMRAMDEHFRSA CHHHHCCCCHHHHEEHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PAAQNIPLLLGLLGVWQISLRGATGHVVLPYHPGLRRLPAYLQQLDMESLGKSVTRDGQP CCCCCCHHHHHHHHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHCHHHHHHHHHCCCCC VDYPTGTSCWGEVGINGQHSFFQWLHQGTGRVIAEFLVPVEEGGLPERHAGLNLASALGQ CCCCCCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHH VQALCQGQAPQGSGPEAEHHRYEGGRPVTLILFRRLDAYTLGRLLALHEHRVFVQASLWG HHHHHCCCCCCCCCCCHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCEEEEEEEECC INPFDQWGVELGKRVAKGLAPVARGEAPPPAEADAATRQALRWAGCWGAGESSDGTGV CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 14500782 [H]