| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is hisC2 [H]
Identifier: 121998890
GI number: 121998890
Start: 2316090
End: 2317187
Strand: Reverse
Name: hisC2 [H]
Synonym: Hhal_2111
Alternate gene names: 121998890
Gene position: 2317187-2316090 (Counterclockwise)
Preceding gene: 121998891
Following gene: 121998888
Centisome position: 86.51
GC content: 70.13
Gene sequence:
>1098_bases GTGACTGAGGTCGAGGCGCGGGTCGCCCGCTGGGTGCGGCCACAGGTGCAGGCCCTGGAGGCCTATCAGGTGGCCGAGCC GGGCAAGGCCATCAAGCTCGATGCCATGGAGAGCCCATGGGCCTGGCCCGGGGCCCTGGAAGAGGCCTGGCTGGAGCGCA TGCGTTCGGTGTCCGTGAACCGCTATCCGGACCCGGCGGCCCGGCGGCTCAAGCCCCTGCTGCGCGAGGGGTTGGGGGTC CCCGAGGGGGCAGAGCTGTTGCTCGGCAACGGCTCCGATGAGCTCATCCAGCTCATCGATCTGGCCGTGGCTGGCAGTGG GCGCACGGTGATGGCCCCGGGGCCGAGTTTTGCCATGTACCGGATCATCGCCGAGTATACCGGCGCCGAATACGTCGAGG TGCCGCTCGATGCGGAGTTCGGGCTGGATCTCGCCGCCACCCGGGAGGCGGTGTCGGCGTACAACCCGGCGGTCACCTAC CTGGCGCACCCGAACAACCCCACCGGCAATGGCCTCGATCTGGACGCCGTGGCGGAGCTGGTGGCGCAGAGCGACGGCCT GGTGGTAGTCGATGAGGCCTACGCCCCCTACGCCGACAGCAGCTTCCTGCCGCGGGTGCTGGAGTTCCCCAACTGCCTGG TGCTGCGCACGCTCTCTAAGGTCGGTCTGGCGGGCCTGCGGGTCGGGGTGCTGATCGGCCATCCGGCCTGGATCGACCAG CTGGAGAAGTGTCGCCTGCCCTACAACCTGGGCAGCCTGGCCCAGGCCAGTGCGGCATTCGCCGTCGAGCACCAGGAGGC CCTGGATCGCTGTGTGGCCCACGTGCTCGGCGAACGGGCGCGGCTGGTCGAGGAGCTGCCGGCGGTCCCCGGTGTCGAGC AGGTCTGGCCGACGCAGACCAACTTCCTCACCTTCCGGGTGCCGCAGGGCAGTGCCGATGCCGTGCACCGTGGTCTGCTC GATCGAGGGGTCCTGATCAAGCGCCTGCACGGCAGCCATCCGCGGCTGGAGGACTGCCTGCGGGTGACGGTCGGTCGCCC CGAGGAGAACAACCGCTTCCTCGAGGCGCTGGCCGAGACCCTCGCCGTGGCGGCCTGA
Upstream 100 bases:
>100_bases GCAGCACTGGCCGGGACCGCCGCGGTGATGGCACGGGGCGAGGGACTGACCGCCCATGCCCGCTCAGCGGAGTACCGCGG CCAGGGGGAGGAGCGCAGCG
Downstream 100 bases:
>100_bases GCCGCGGCTGCCCCAGCGCCGGCCAGTCTGGCCGGGGCGTTGTCGATTAGCGCCGCCCGGGGTGGCTGGGCTGCTGCATG TCCGGCCGCTCACCGAGGGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 2 [H]
Number of amino acids: Translated: 365; Mature: 364
Protein sequence:
>365_residues MTEVEARVARWVRPQVQALEAYQVAEPGKAIKLDAMESPWAWPGALEEAWLERMRSVSVNRYPDPAARRLKPLLREGLGV PEGAELLLGNGSDELIQLIDLAVAGSGRTVMAPGPSFAMYRIIAEYTGAEYVEVPLDAEFGLDLAATREAVSAYNPAVTY LAHPNNPTGNGLDLDAVAELVAQSDGLVVVDEAYAPYADSSFLPRVLEFPNCLVLRTLSKVGLAGLRVGVLIGHPAWIDQ LEKCRLPYNLGSLAQASAAFAVEHQEALDRCVAHVLGERARLVEELPAVPGVEQVWPTQTNFLTFRVPQGSADAVHRGLL DRGVLIKRLHGSHPRLEDCLRVTVGRPEENNRFLEALAETLAVAA
Sequences:
>Translated_365_residues MTEVEARVARWVRPQVQALEAYQVAEPGKAIKLDAMESPWAWPGALEEAWLERMRSVSVNRYPDPAARRLKPLLREGLGV PEGAELLLGNGSDELIQLIDLAVAGSGRTVMAPGPSFAMYRIIAEYTGAEYVEVPLDAEFGLDLAATREAVSAYNPAVTY LAHPNNPTGNGLDLDAVAELVAQSDGLVVVDEAYAPYADSSFLPRVLEFPNCLVLRTLSKVGLAGLRVGVLIGHPAWIDQ LEKCRLPYNLGSLAQASAAFAVEHQEALDRCVAHVLGERARLVEELPAVPGVEQVWPTQTNFLTFRVPQGSADAVHRGLL DRGVLIKRLHGSHPRLEDCLRVTVGRPEENNRFLEALAETLAVAA >Mature_364_residues TEVEARVARWVRPQVQALEAYQVAEPGKAIKLDAMESPWAWPGALEEAWLERMRSVSVNRYPDPAARRLKPLLREGLGVP EGAELLLGNGSDELIQLIDLAVAGSGRTVMAPGPSFAMYRIIAEYTGAEYVEVPLDAEFGLDLAATREAVSAYNPAVTYL AHPNNPTGNGLDLDAVAELVAQSDGLVVVDEAYAPYADSSFLPRVLEFPNCLVLRTLSKVGLAGLRVGVLIGHPAWIDQL EKCRLPYNLGSLAQASAAFAVEHQEALDRCVAHVLGERARLVEELPAVPGVEQVWPTQTNFLTFRVPQGSADAVHRGLLD RGVLIKRLHGSHPRLEDCLRVTVGRPEENNRFLEALAETLAVAA
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=325, Percent_Identity=33.8461538461538, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788722, Length=210, Percent_Identity=29.0476190476191, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=385, Percent_Identity=30.6493506493506, Blast_Score=138, Evalue=2e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 39644; Mature: 39512
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVEARVARWVRPQVQALEAYQVAEPGKAIKLDAMESPWAWPGALEEAWLERMRSVSVN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC RYPDPAARRLKPLLREGLGVPEGAELLLGNGSDELIQLIDLAVAGSGRTVMAPGPSFAMY CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCHHHH RIIAEYTGAEYVEVPLDAEFGLDLAATREAVSAYNPAVTYLAHPNNPTGNGLDLDAVAEL HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH VAQSDGLVVVDEAYAPYADSSFLPRVLEFPNCLVLRTLSKVGLAGLRVGVLIGHPAWIDQ HHCCCCEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCHHHHEEEEEECCHHHHHH LEKCRLPYNLGSLAQASAAFAVEHQEALDRCVAHVLGERARLVEELPAVPGVEQVWPTQT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC NFLTFRVPQGSADAVHRGLLDRGVLIKRLHGSHPRLEDCLRVTVGRPEENNRFLEALAET CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH LAVAA HHHCC >Mature Secondary Structure TEVEARVARWVRPQVQALEAYQVAEPGKAIKLDAMESPWAWPGALEEAWLERMRSVSVN CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCC RYPDPAARRLKPLLREGLGVPEGAELLLGNGSDELIQLIDLAVAGSGRTVMAPGPSFAMY CCCCHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEECCCCCHHHH RIIAEYTGAEYVEVPLDAEFGLDLAATREAVSAYNPAVTYLAHPNNPTGNGLDLDAVAEL HHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHH VAQSDGLVVVDEAYAPYADSSFLPRVLEFPNCLVLRTLSKVGLAGLRVGVLIGHPAWIDQ HHCCCCEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHCHHHHEEEEEECCHHHHHH LEKCRLPYNLGSLAQASAAFAVEHQEALDRCVAHVLGERARLVEELPAVPGVEQVWPTQT HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCC NFLTFRVPQGSADAVHRGLLDRGVLIKRLHGSHPRLEDCLRVTVGRPEENNRFLEALAET CEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHH LAVAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA