| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is hisD
Identifier: 121998891
GI number: 121998891
Start: 2317180
End: 2318499
Strand: Reverse
Name: hisD
Synonym: Hhal_2112
Alternate gene names: 121998891
Gene position: 2318499-2317180 (Counterclockwise)
Preceding gene: 121998892
Following gene: 121998890
Centisome position: 86.56
GC content: 70.08
Gene sequence:
>1320_bases ATGGTCGACATCAAGCGGCTGAGCACCACACAACCCGATTTCTGGGACAGCCTGGACGCCCTGACGAGCTGGGGGAGCCA CCCGGGCGCCTCCATTGAGCAGCGCGTCGCCGAGGTGGTCGAGGGGGTTCGCACCGGCGGTGATGCGGCCCTGCTGGATT ACACGCGGCGTTTCGACGGCCGCGAGGCCGATTCGGTGGCCGCGCTGGAGATCCCGACCGAGCAGGTGGTCGCGGCCCAC GAACAGATCGCCCCGGAGATGCGCGAGGCGCTGGAGCAGGCGGCCGCGCGGATCCGCGACTACGCGCAGCGTCAGCGCCT GGAGTCCTGGGAGTACCAGGACGCCGACGGTAACCGCCTCGGGCAGCAGGTCACCGCCCTCGACCGGGTCGGGGTCTACG TCCCCGGCGGCAAGGCCGCCTATCCCTCATCGGTGCTGATGAACGCCGTGCCGGCCCGGGTGGCCGGCGTGCAGGAGATC ATCATGACCGTCCCGGCCCCCGGGGGGGAGCTCTCACCACTGGTGCTGGCCGCTGCCCATGTGGCGGGCGTGGATCGCAT CTTCACCTTGGGCGGGGCGCAGGCGGTGGCGGCCCTGGCCTACGGGACCGAGACCGTACCCGCCGTGGACAAGATCGTCG GCCCCGGTAACGCCTATGTTGCCGAGGCCAAGCGCCGCGTCTACGGGGTGGTGGGCATCGACATGATCGCCGGCCCCTCC GAGGTGCTGGTCATCAGCGACGGCCAGGCCGATCCCGAGTGGATCGCCATGGACCTGTTCTCCCAGGCCGAGCACGACGA GGAGGCGCAGGCCCTGCTGGTCTGCCCGGACTTCGTCTTCCTCGATCAGGTCCAGGCGGCCATGGAGCGCCTGCTGCCGG ATATGGAGCGTTCGGAGATCATCCGCACCTCGCTGGCGGAGCGGGGGGCGTTGATCTGTGTCCGCGATCTGGAAGAGGCG CAGCAGGTGGCCAACTATGTCGCTCCGGAACACCTGGAGCTCTCCGTGGCCGAGCCCGATCGACTGGCCGAGGGCATCCG TCACGCCGGGGCGATCTTCCTCGGCCATTACAGCGCCGAGTCACTGGGTGATTACTGTGCCGGCCCCAACCACACGCTGC CGACGTCGCGGACCGCGCGGTTCGCATCGCCGTTGGGTGTCTACGACTTCCAGAAGCGTTCCACCACGCTGGCCTGCTCA CCCGCCGGCGCCGCAGCACTGGCCGGGACCGCCGCGGTGATGGCACGGGGCGAGGGACTGACCGCCCATGCCCGCTCAGC GGAGTACCGCGGCCAGGGGGAGGAGCGCAGCGGTGACTGA
Upstream 100 bases:
>100_bases CCCTGAAGACCAGCCCCGACCGTCTGGGGACGCTGATCGACGATCTGGCGGCGGCGGCGCGCGCCAAGGACACCAGTTAG CTTTATCGCGAGAGGAAAGC
Downstream 100 bases:
>100_bases GGTCGAGGCGCGGGTCGCCCGCTGGGTGCGGCCACAGGTGCAGGCCCTGGAGGCCTATCAGGTGGCCGAGCCGGGCAAGG CCATCAAGCTCGATGCCATG
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH [H]
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MVDIKRLSTTQPDFWDSLDALTSWGSHPGASIEQRVAEVVEGVRTGGDAALLDYTRRFDGREADSVAALEIPTEQVVAAH EQIAPEMREALEQAAARIRDYAQRQRLESWEYQDADGNRLGQQVTALDRVGVYVPGGKAAYPSSVLMNAVPARVAGVQEI IMTVPAPGGELSPLVLAAAHVAGVDRIFTLGGAQAVAALAYGTETVPAVDKIVGPGNAYVAEAKRRVYGVVGIDMIAGPS EVLVISDGQADPEWIAMDLFSQAEHDEEAQALLVCPDFVFLDQVQAAMERLLPDMERSEIIRTSLAERGALICVRDLEEA QQVANYVAPEHLELSVAEPDRLAEGIRHAGAIFLGHYSAESLGDYCAGPNHTLPTSRTARFASPLGVYDFQKRSTTLACS PAGAAALAGTAAVMARGEGLTAHARSAEYRGQGEERSGD
Sequences:
>Translated_439_residues MVDIKRLSTTQPDFWDSLDALTSWGSHPGASIEQRVAEVVEGVRTGGDAALLDYTRRFDGREADSVAALEIPTEQVVAAH EQIAPEMREALEQAAARIRDYAQRQRLESWEYQDADGNRLGQQVTALDRVGVYVPGGKAAYPSSVLMNAVPARVAGVQEI IMTVPAPGGELSPLVLAAAHVAGVDRIFTLGGAQAVAALAYGTETVPAVDKIVGPGNAYVAEAKRRVYGVVGIDMIAGPS EVLVISDGQADPEWIAMDLFSQAEHDEEAQALLVCPDFVFLDQVQAAMERLLPDMERSEIIRTSLAERGALICVRDLEEA QQVANYVAPEHLELSVAEPDRLAEGIRHAGAIFLGHYSAESLGDYCAGPNHTLPTSRTARFASPLGVYDFQKRSTTLACS PAGAAALAGTAAVMARGEGLTAHARSAEYRGQGEERSGD >Mature_439_residues MVDIKRLSTTQPDFWDSLDALTSWGSHPGASIEQRVAEVVEGVRTGGDAALLDYTRRFDGREADSVAALEIPTEQVVAAH EQIAPEMREALEQAAARIRDYAQRQRLESWEYQDADGNRLGQQVTALDRVGVYVPGGKAAYPSSVLMNAVPARVAGVQEI IMTVPAPGGELSPLVLAAAHVAGVDRIFTLGGAQAVAALAYGTETVPAVDKIVGPGNAYVAEAKRRVYGVVGIDMIAGPS EVLVISDGQADPEWIAMDLFSQAEHDEEAQALLVCPDFVFLDQVQAAMERLLPDMERSEIIRTSLAERGALICVRDLEEA QQVANYVAPEHLELSVAEPDRLAEGIRHAGAIFLGHYSAESLGDYCAGPNHTLPTSRTARFASPLGVYDFQKRSTTLACS PAGAAALAGTAAVMARGEGLTAHARSAEYRGQGEERSGD
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine [H]
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788331, Length=403, Percent_Identity=40.9429280397022, Blast_Score=292, Evalue=3e-80, Organism=Saccharomyces cerevisiae, GI6319819, Length=411, Percent_Identity=38.1995133819951, Blast_Score=258, Evalue=9e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 [H]
Pfam domain/function: PF00815 Histidinol_dh [H]
EC number: =1.1.1.23 [H]
Molecular weight: Translated: 46804; Mature: 46804
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDIKRLSTTQPDFWDSLDALTSWGSHPGASIEQRVAEVVEGVRTGGDAALLDYTRRFDG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC READSVAALEIPTEQVVAAHEQIAPEMREALEQAAARIRDYAQRQRLESWEYQDADGNRL CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GQQVTALDRVGVYVPGGKAAYPSSVLMNAVPARVAGVQEIIMTVPAPGGELSPLVLAAAH HHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VAGVDRIFTLGGAQAVAALAYGTETVPAVDKIVGPGNAYVAEAKRRVYGVVGIDMIAGPS HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEEHHEECCCC EVLVISDGQADPEWIAMDLFSQAEHDEEAQALLVCPDFVFLDQVQAAMERLLPDMERSEI CEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHH IRTSLAERGALICVRDLEEAQQVANYVAPEHLELSVAEPDRLAEGIRHAGAIFLGHYSAE HHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCEEEEECCCHH SLGDYCAGPNHTLPTSRTARFASPLGVYDFQKRSTTLACSPAGAAALAGTAAVMARGEGL HHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC TAHARSAEYRGQGEERSGD EECCCCCHHCCCCCCCCCC >Mature Secondary Structure MVDIKRLSTTQPDFWDSLDALTSWGSHPGASIEQRVAEVVEGVRTGGDAALLDYTRRFDG CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC READSVAALEIPTEQVVAAHEQIAPEMREALEQAAARIRDYAQRQRLESWEYQDADGNRL CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH GQQVTALDRVGVYVPGGKAAYPSSVLMNAVPARVAGVQEIIMTVPAPGGELSPLVLAAAH HHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH VAGVDRIFTLGGAQAVAALAYGTETVPAVDKIVGPGNAYVAEAKRRVYGVVGIDMIAGPS HHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHEEEEEHHEECCCC EVLVISDGQADPEWIAMDLFSQAEHDEEAQALLVCPDFVFLDQVQAAMERLLPDMERSEI CEEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCHHHHH IRTSLAERGALICVRDLEEAQQVANYVAPEHLELSVAEPDRLAEGIRHAGAIFLGHYSAE HHHHHHHCCCEEEEHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCEEEEECCCHH SLGDYCAGPNHTLPTSRTARFASPLGVYDFQKRSTTLACSPAGAAALAGTAAVMARGEGL HHHHHCCCCCCCCCCCCHHHHCCCCCCCCHHCCCCEEEECCCCHHHHHHHHHHHCCCCCC TAHARSAEYRGQGEERSGD EECCCCCHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA