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The map label for this gene is ybgI [C]

Identifier: 121998888

GI number: 121998888

Start: 2314003

End: 2314761

Strand: Reverse

Name: ybgI [C]

Synonym: Hhal_2109

Alternate gene names: 121998888

Gene position: 2314761-2314003 (Counterclockwise)

Preceding gene: 121998890

Following gene: 121998887

Centisome position: 86.42

GC content: 69.83

Gene sequence:

>759_bases
ATGGTGCACCGAAACCGCCTGGAAGCATACCTGAACGAGCTGCTGACCCCCGCCGAGTACCCCGACTACGCGCCCAACGG
ACTGCAGGTCGAGGGCCGTGAGCAGATTGCCACGGTGGTCAGCGGAGTGACCGCCAGTGCGGCGCTGATCGAGGCAGCGC
GCGACCTGCGCGCCGACGCGGTGATCGTCCACCACGGCTACTTCTGGAAGGGGGAGGACCCGCGGGTGGTGGGCATGAAG
GCCCGTCGGCTGCGGCTGTTGATCGAGGCCGGGATCAACCTCTTCGCCTACCATCTGCCTCTGGACGTCCACCCGAAGTT
GGGCAACAACGCCGGGCTGGCCCGACTCCTGGGCCTAGAGACAGACGGCCGGCACGCAGCCAAGGGGGTACCCGGCCTGC
TGTGGTCCGGGGTGCTGTCCGAGGCGGAGCGGGCCGACGCGTTCGCGGCGCGGGTTGAGCAGGCGCTGGGCCGTGCGCCC
ACCCATGTTGATGGGGGGACCACCACCATCTACCGGGTGGCCTGGTGCAGTGGCGGGGCCGACGGCCTGATCGACCAGGC
GGCGGATCTGGGCGTCGATGCCTTCCTCTCGGGCGAGCTCTCGGAGCCGACGACCCACGTGGCCCGCGAGCGCGGGATTC
ACTATTTTGCCGCTGGCCACCACGCCAGCGAGCGCAGCGGCGTGCAGGCGCTGGGGGCCCATCTGGCGGAGGCCCTCGGT
GTGGAACACCACTACGTGGAGATCGAGAACCCGGCCTAG

Upstream 100 bases:

>100_bases
GAGGAGAAACCGAATCCACTCGGTGCCCTCCAGGCCCAATGGCCGCCAACCGGATCGTCCTGCTAGCCTCATGAAAATGC
CTGCGTCGAGAACCGAGGAC

Downstream 100 bases:

>100_bases
ACATGACGTATTACGGTTAATGTAATAGCCTATCGGTCAACCCCGGGGTGTTGAGGCGGGGCGGTCCTGCCTTGACGCCC
GGCGATGCGATGTACGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MVHRNRLEAYLNELLTPAEYPDYAPNGLQVEGREQIATVVSGVTASAALIEAARDLRADAVIVHHGYFWKGEDPRVVGMK
ARRLRLLIEAGINLFAYHLPLDVHPKLGNNAGLARLLGLETDGRHAAKGVPGLLWSGVLSEAERADAFAARVEQALGRAP
THVDGGTTTIYRVAWCSGGADGLIDQAADLGVDAFLSGELSEPTTHVARERGIHYFAAGHHASERSGVQALGAHLAEALG
VEHHYVEIENPA

Sequences:

>Translated_252_residues
MVHRNRLEAYLNELLTPAEYPDYAPNGLQVEGREQIATVVSGVTASAALIEAARDLRADAVIVHHGYFWKGEDPRVVGMK
ARRLRLLIEAGINLFAYHLPLDVHPKLGNNAGLARLLGLETDGRHAAKGVPGLLWSGVLSEAERADAFAARVEQALGRAP
THVDGGTTTIYRVAWCSGGADGLIDQAADLGVDAFLSGELSEPTTHVARERGIHYFAAGHHASERSGVQALGAHLAEALG
VEHHYVEIENPA
>Mature_252_residues
MVHRNRLEAYLNELLTPAEYPDYAPNGLQVEGREQIATVVSGVTASAALIEAARDLRADAVIVHHGYFWKGEDPRVVGMK
ARRLRLLIEAGINLFAYHLPLDVHPKLGNNAGLARLLGLETDGRHAAKGVPGLLWSGVLSEAERADAFAARVEQALGRAP
THVDGGTTTIYRVAWCSGGADGLIDQAADLGVDAFLSGELSEPTTHVARERGIHYFAAGHHASERSGVQALGAHLAEALG
VEHHYVEIENPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=252, Percent_Identity=50.3968253968254, Blast_Score=242, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 26992; Mature: 26992

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHRNRLEAYLNELLTPAEYPDYAPNGLQVEGREQIATVVSGVTASAALIEAARDLRADA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIVHHGYFWKGEDPRVVGMKARRLRLLIEAGINLFAYHLPLDVHPKLGNNAGLARLLGLE
EEEECCEEECCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEECC
TDGRHAAKGVPGLLWSGVLSEAERADAFAARVEQALGRAPTHVDGGTTTIYRVAWCSGGA
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCC
DGLIDQAADLGVDAFLSGELSEPTTHVARERGIHYFAAGHHASERSGVQALGAHLAEALG
CHHHHHHHHCCHHHEECCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
VEHHYVEIENPA
CCEEEEEECCCC
>Mature Secondary Structure
MVHRNRLEAYLNELLTPAEYPDYAPNGLQVEGREQIATVVSGVTASAALIEAARDLRADA
CCCHHHHHHHHHHHCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
VIVHHGYFWKGEDPRVVGMKARRLRLLIEAGINLFAYHLPLDVHPKLGNNAGLARLLGLE
EEEECCEEECCCCCEEECHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHEECC
TDGRHAAKGVPGLLWSGVLSEAERADAFAARVEQALGRAPTHVDGGTTTIYRVAWCSGGA
CCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCC
DGLIDQAADLGVDAFLSGELSEPTTHVARERGIHYFAAGHHASERSGVQALGAHLAEALG
CHHHHHHHHCCHHHEECCCCCCCHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHC
VEHHYVEIENPA
CCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]