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The map label for this gene is petB [H]

Identifier: 121998887

GI number: 121998887

Start: 2312492

End: 2313724

Strand: Reverse

Name: petB [H]

Synonym: Hhal_2108

Alternate gene names: 121998887

Gene position: 2313724-2312492 (Counterclockwise)

Preceding gene: 121998888

Following gene: 121998886

Centisome position: 86.38

GC content: 61.64

Gene sequence:

>1233_bases
ATGAACCGTCTCAATCTCAGCGGTCTGCAGCAGTGGATCGATGACCGCTATCCCATGACGAGTACTTGGCGGTACCACAT
GACCGAGTACTACGTCCCCAAGAACGTCAACTGGTGGTACCTGTTCGGATCGCTCTCGATCCTGGTCCTTGTGATCCAGA
TCGTGTCCGGCATCTGGCTGATGTTCTACTACCAGCCCTCCGTCGAGCGCGCGTTCTCCTCCGTGGAGTTCATCATGCGC
GACGTGGACTGGGGCTGGTTGATGCGCTACATGCACACGACGGGCGCGTCGGCGTTCTTCCTGGTTGTGTATCTGCACAT
GTACCGAGGGCTGCTCTACGGCTCTTATAAGAAGCCGCGTGAGCTGCTCTGGATCACCGGTGTGCTGATCTACCTGGTCA
TGATGACCGAGGCGTTCATGGGCTACGTCCTGCCCTGGGGGCAGATGTCCTACTGGGCGGCGCAGGTGATCATCGCGCTG
GCTGGTGTGATCCCGGTGGTCGGTGACGAGCTGGTGGTCTGGCTTCAGGGCGGCTTCGTCGTCAACGAGGCGACGCTCGG
CCGGCTCTTCGCCCTCCACGTGGTGGCGCTGCCGCTGGTCCTGATCGCGCTGGTGTTCGTGCATATCGTTGCACTGCACC
ACGTCGGCTCCAGCAGTCCTGACGGCGTCGAGATCAAGCAGAACAAGGATGAGAACGGCAAGCCCATCGACGGCGTTGGC
TTCCACCCCTACGTCGTGGCCAAGGACATGTTCGGCTGGGGCATCTTCCTGATCCTGTTCTGCGCGGTGATGTTCTTCGC
CCCGACCTTCGGCGGCTACTTCATCGAGGCGCCGAACTTCCAGGAGGCGAATCCGCTGCAGACGCCCGAGGTGATCCACC
CGATCTGGTACTTCACGGCGTGGTACGCCATGCTGCAGTCGATCCCGAGCGAGGCCCTGGGCGTGATTGTCATGCTGGCG
GCGCCGGGCATCCTGCTGTTCCTGCCCTGGATCGACCGCAGTCCGGTGAAGTCCATCCGCTACCGCGGTCTCGGCTTCAA
GGTCGCGCTGGCTGCCTTCACGGTGTCCTTCCTGGTGCTGACCTGGGCCGGCATGGAGGAGCCCACGGGTCTGCCGATCC
TGTTGAGCCAGATCTCGACCGTGATCTACTTCGGGTTCTTCGTCTTCCTCTGGGCCTACACCTACTTCGGGTTCGAGAAG
ACGAAGCCTGTTCCGGAAAGGGTGACCGTCTGA

Upstream 100 bases:

>100_bases
CAGGACCGGGGAGCCTGTCGGTGCCGCAAGATCGGCTCCCGGAGGACATTAAGCTCGTCATCGGCGAGGATACCGAAGAC
GAAGAGGAGGGCGCGGCGTG

Downstream 100 bases:

>100_bases
CATGAGCATGAAAAAGAAGACCGGAATCGCACTGAGTGCATTCCTCGCCCTGGCCTTCACCGGCGCGGTGAAGGCCGAGG
TGGGGATGATGGAACCGAAC

Product: cytochrome b/b6 domain-containing protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MNRLNLSGLQQWIDDRYPMTSTWRYHMTEYYVPKNVNWWYLFGSLSILVLVIQIVSGIWLMFYYQPSVERAFSSVEFIMR
DVDWGWLMRYMHTTGASAFFLVVYLHMYRGLLYGSYKKPRELLWITGVLIYLVMMTEAFMGYVLPWGQMSYWAAQVIIAL
AGVIPVVGDELVVWLQGGFVVNEATLGRLFALHVVALPLVLIALVFVHIVALHHVGSSSPDGVEIKQNKDENGKPIDGVG
FHPYVVAKDMFGWGIFLILFCAVMFFAPTFGGYFIEAPNFQEANPLQTPEVIHPIWYFTAWYAMLQSIPSEALGVIVMLA
APGILLFLPWIDRSPVKSIRYRGLGFKVALAAFTVSFLVLTWAGMEEPTGLPILLSQISTVIYFGFFVFLWAYTYFGFEK
TKPVPERVTV

Sequences:

>Translated_410_residues
MNRLNLSGLQQWIDDRYPMTSTWRYHMTEYYVPKNVNWWYLFGSLSILVLVIQIVSGIWLMFYYQPSVERAFSSVEFIMR
DVDWGWLMRYMHTTGASAFFLVVYLHMYRGLLYGSYKKPRELLWITGVLIYLVMMTEAFMGYVLPWGQMSYWAAQVIIAL
AGVIPVVGDELVVWLQGGFVVNEATLGRLFALHVVALPLVLIALVFVHIVALHHVGSSSPDGVEIKQNKDENGKPIDGVG
FHPYVVAKDMFGWGIFLILFCAVMFFAPTFGGYFIEAPNFQEANPLQTPEVIHPIWYFTAWYAMLQSIPSEALGVIVMLA
APGILLFLPWIDRSPVKSIRYRGLGFKVALAAFTVSFLVLTWAGMEEPTGLPILLSQISTVIYFGFFVFLWAYTYFGFEK
TKPVPERVTV
>Mature_410_residues
MNRLNLSGLQQWIDDRYPMTSTWRYHMTEYYVPKNVNWWYLFGSLSILVLVIQIVSGIWLMFYYQPSVERAFSSVEFIMR
DVDWGWLMRYMHTTGASAFFLVVYLHMYRGLLYGSYKKPRELLWITGVLIYLVMMTEAFMGYVLPWGQMSYWAAQVIIAL
AGVIPVVGDELVVWLQGGFVVNEATLGRLFALHVVALPLVLIALVFVHIVALHHVGSSSPDGVEIKQNKDENGKPIDGVG
FHPYVVAKDMFGWGIFLILFCAVMFFAPTFGGYFIEAPNFQEANPLQTPEVIHPIWYFTAWYAMLQSIPSEALGVIVMLA
APGILLFLPWIDRSPVKSIRYRGLGFKVALAAFTVSFLVLTWAGMEEPTGLPILLSQISTVIYFGFFVFLWAYTYFGFEK
TKPVPERVTV

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=370, Percent_Identity=38.1081081081081, Blast_Score=233, Evalue=2e-61,
Organism=Saccharomyces cerevisiae, GI6226529, Length=358, Percent_Identity=41.6201117318436, Blast_Score=249, Evalue=6e-67,
Organism=Saccharomyces cerevisiae, GI6226532, Length=237, Percent_Identity=43.4599156118143, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6226531, Length=151, Percent_Identity=50.3311258278146, Blast_Score=147, Evalue=3e-36,
Organism=Saccharomyces cerevisiae, GI6226530, Length=127, Percent_Identity=49.6062992125984, Blast_Score=122, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 46804; Mature: 46804

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLNLSGLQQWIDDRYPMTSTWRYHMTEYYVPKNVNWWYLFGSLSILVLVIQIVSGIWL
CCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHH
MFYYQPSVERAFSSVEFIMRDVDWGWLMRYMHTTGASAFFLVVYLHMYRGLLYGSYKKPR
HHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
ELLWITGVLIYLVMMTEAFMGYVLPWGQMSYWAAQVIIALAGVIPVVGDELVVWLQGGFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEE
VNEATLGRLFALHVVALPLVLIALVFVHIVALHHVGSSSPDGVEIKQNKDENGKPIDGVG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
FHPYVVAKDMFGWGIFLILFCAVMFFAPTFGGYFIEAPNFQEANPLQTPEVIHPIWYFTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
WYAMLQSIPSEALGVIVMLAAPGILLFLPWIDRSPVKSIRYRGLGFKVALAAFTVSFLVL
HHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
TWAGMEEPTGLPILLSQISTVIYFGFFVFLWAYTYFGFEKTKPVPERVTV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRLNLSGLQQWIDDRYPMTSTWRYHMTEYYVPKNVNWWYLFGSLSILVLVIQIVSGIWL
CCCCCHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHH
MFYYQPSVERAFSSVEFIMRDVDWGWLMRYMHTTGASAFFLVVYLHMYRGLLYGSYKKPR
HHEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCH
ELLWITGVLIYLVMMTEAFMGYVLPWGQMSYWAAQVIIALAGVIPVVGDELVVWLQGGFV
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEE
VNEATLGRLFALHVVALPLVLIALVFVHIVALHHVGSSSPDGVEIKQNKDENGKPIDGVG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCC
FHPYVVAKDMFGWGIFLILFCAVMFFAPTFGGYFIEAPNFQEANPLQTPEVIHPIWYFTA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
WYAMLQSIPSEALGVIVMLAAPGILLFLPWIDRSPVKSIRYRGLGFKVALAAFTVSFLVL
HHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
TWAGMEEPTGLPILLSQISTVIYFGFFVFLWAYTYFGFEKTKPVPERVTV
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA