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The map label for this gene is petC [H]

Identifier: 121998886

GI number: 121998886

Start: 2311756

End: 2312484

Strand: Reverse

Name: petC [H]

Synonym: Hhal_2107

Alternate gene names: 121998886

Gene position: 2312484-2311756 (Counterclockwise)

Preceding gene: 121998887

Following gene: 121998885

Centisome position: 86.34

GC content: 61.18

Gene sequence:

>729_bases
ATGAAAAAGAAGACCGGAATCGCACTGAGTGCATTCCTCGCCCTGGCCTTCACCGGCGCGGTGAAGGCCGAGGTGGGGAT
GATGGAACCGAACATCAGCCACCACGACCGGGAGTCCATCCGCAAGGGTGCCGAGCTGTTTGCCGACTACTGCGTCGGGT
GCCACTCGGTGGAGTACCTGCGCTACCAGCGGCTGGCCGATGACGTCGGCGAGGACGAGGACTGGGTCGAAGAGAAGATC
ATGCGCGGCAACTTCGAGTTGCACGAGCCGATCATCTCGCCCATGGATCCCGAGGATGGCGAGAATTGGTTCGGGCTGAC
TCCGCCGGACCTCTCGCTGACCTCCCGCATCCACGGTGATGACTGGATCTACACCTACCTCAACACCTTCTACGTGGATG
AAGACGCCGAGGTGGGCTACAACAACTATGTCCAGGAAGGGACCTCGATGCCGCACATCCTGTTCGCCCTGCAGGGCGAT
CAGAAGGCGGTCAAGGACGACGATGGCCACATCGTTGACTTCGAGATCATCGAGGGTGCCGAGGGCAAGCTGAGCGAGGA
GGAGTACCGCGAGGTCACCGCCCAGCTCACCGCCTTCCTCTCCTACGCCGGCGAGCCCATCCGGGCGGACCGTGAGCGGA
TGGGGGTCTGGGTGATCCTCTTCCTGATCGTCATGACCGGTGTCTTCTACCTCCTGTACAAGGAGTTCTGGAGAGGCATC
AAGAAGTGA

Upstream 100 bases:

>100_bases
GTGATCTACTTCGGGTTCTTCGTCTTCCTCTGGGCCTACACCTACTTCGGGTTCGAGAAGACGAAGCCTGTTCCGGAAAG
GGTGACCGTCTGACATGAGC

Downstream 100 bases:

>100_bases
CCCGGGTGGGGTGGCCCGGGGACTCCGGGCCACCCCGCAAAACGGTCGCCGGAGGGCCCGTGATCCGCCTCTATACCGGA
GCGCAATGCATACACAGCCA

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MKKKTGIALSAFLALAFTGAVKAEVGMMEPNISHHDRESIRKGAELFADYCVGCHSVEYLRYQRLADDVGEDEDWVEEKI
MRGNFELHEPIISPMDPEDGENWFGLTPPDLSLTSRIHGDDWIYTYLNTFYVDEDAEVGYNNYVQEGTSMPHILFALQGD
QKAVKDDDGHIVDFEIIEGAEGKLSEEEYREVTAQLTAFLSYAGEPIRADRERMGVWVILFLIVMTGVFYLLYKEFWRGI
KK

Sequences:

>Translated_242_residues
MKKKTGIALSAFLALAFTGAVKAEVGMMEPNISHHDRESIRKGAELFADYCVGCHSVEYLRYQRLADDVGEDEDWVEEKI
MRGNFELHEPIISPMDPEDGENWFGLTPPDLSLTSRIHGDDWIYTYLNTFYVDEDAEVGYNNYVQEGTSMPHILFALQGD
QKAVKDDDGHIVDFEIIEGAEGKLSEEEYREVTAQLTAFLSYAGEPIRADRERMGVWVILFLIVMTGVFYLLYKEFWRGI
KK
>Mature_242_residues
MKKKTGIALSAFLALAFTGAVKAEVGMMEPNISHHDRESIRKGAELFADYCVGCHSVEYLRYQRLADDVGEDEDWVEEKI
MRGNFELHEPIISPMDPEDGENWFGLTPPDLSLTSRIHGDDWIYTYLNTFYVDEDAEVGYNNYVQEGTSMPHILFALQGD
QKAVKDDDGHIVDFEIIEGAEGKLSEEEYREVTAQLTAFLSYAGEPIRADRERMGVWVILFLIVMTGVFYLLYKEFWRGI
KK

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27683; Mature: 27683

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKTGIALSAFLALAFTGAVKAEVGMMEPNISHHDRESIRKGAELFADYCVGCHSVEYL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
RYQRLADDVGEDEDWVEEKIMRGNFELHEPIISPMDPEDGENWFGLTPPDLSLTSRIHGD
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
DWIYTYLNTFYVDEDAEVGYNNYVQEGTSMPHILFALQGDQKAVKDDDGHIVDFEIIEGA
CHHEEEHHHHEECCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCC
EGKLSEEEYREVTAQLTAFLSYAGEPIRADRERMGVWVILFLIVMTGVFYLLYKEFWRGI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KK
CC
>Mature Secondary Structure
MKKKTGIALSAFLALAFTGAVKAEVGMMEPNISHHDRESIRKGAELFADYCVGCHSVEYL
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
RYQRLADDVGEDEDWVEEKIMRGNFELHEPIISPMDPEDGENWFGLTPPDLSLTSRIHGD
HHHHHHHHCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
DWIYTYLNTFYVDEDAEVGYNNYVQEGTSMPHILFALQGDQKAVKDDDGHIVDFEIIEGA
CHHEEEHHHHEECCCCCCCCHHHHHCCCCCCEEEEEEECCCCCCCCCCCCEEEEEEECCC
EGKLSEEEYREVTAQLTAFLSYAGEPIRADRERMGVWVILFLIVMTGVFYLLYKEFWRGI
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA