| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is purE [H]
Identifier: 121998850
GI number: 121998850
Start: 2276678
End: 2277169
Strand: Reverse
Name: purE [H]
Synonym: Hhal_2071
Alternate gene names: 121998850
Gene position: 2277169-2276678 (Counterclockwise)
Preceding gene: 121998851
Following gene: 121998849
Centisome position: 85.02
GC content: 70.73
Gene sequence:
>492_bases ATGACCGACGCGCAGCCTTTAGTGGGCGTCGTGATGGGCAGCAGTTCCGACTGGGATACCCTCTCCGGCGCCGCCGAGGT GCTTCGCGATTTCGAGGTGCCCCACGAGGCCCGGGTGGTCTCTGCCCACCGAACCCCGCAACTGATGGCCGACTACGCCG CCGAGGCCGAGCAGCGTGGCCTGCGGGCGATCATTGCCGGCGCCGGCGGCGCGGCGCATCTGCCCGGCATGCTCGCCGCG CAGACCATCGTGCCGGTGCTCGGCGTCCCGGTGCAGTCGAAGGCCCTCAACGGCCTCGATTCGCTGCTTTCCATCGTGCA GATGCCGGCCGGTGTGCCCACGGCGACTTTCGCCATCGGCACCGCCGGGGCGCGCAACGCCGCGCTGTTCGCCGTGGCCA TGCTGGCCCGCGAGGAGCCCCGCTACGCTGAAGCCCTGAGGGCGTTCCGTGCCCAACAGGCCGAGCGTGTCTACGGGGAG GAACTCTCGTGA
Upstream 100 bases:
>100_bases GTGGTGCGGGCCGTCGACGAGATGACCGGCACGCTGCTCAACATCCGTTCCTGATCTTCCCGCCCGTGCTACAATTTTCG CTTTTGCGAGTGAACCCGCT
Downstream 100 bases:
>100_bases GCGGCCCGGCGCCGATCCTCCCCGGTGCAGCCATCGGGATCCTCGGCGCCGGTCAGCTCGGGCGCATGCTCGCCATGGCG GCGCGCCGCTCGGGCTACCG
Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
Products: NA
Alternate protein names: N5-CAIR mutase; 5-(carboxyamino)imidazole ribonucleotide mutase [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MTDAQPLVGVVMGSSSDWDTLSGAAEVLRDFEVPHEARVVSAHRTPQLMADYAAEAEQRGLRAIIAGAGGAAHLPGMLAA QTIVPVLGVPVQSKALNGLDSLLSIVQMPAGVPTATFAIGTAGARNAALFAVAMLAREEPRYAEALRAFRAQQAERVYGE ELS
Sequences:
>Translated_163_residues MTDAQPLVGVVMGSSSDWDTLSGAAEVLRDFEVPHEARVVSAHRTPQLMADYAAEAEQRGLRAIIAGAGGAAHLPGMLAA QTIVPVLGVPVQSKALNGLDSLLSIVQMPAGVPTATFAIGTAGARNAALFAVAMLAREEPRYAEALRAFRAQQAERVYGE ELS >Mature_162_residues TDAQPLVGVVMGSSSDWDTLSGAAEVLRDFEVPHEARVVSAHRTPQLMADYAAEAEQRGLRAIIAGAGGAAHLPGMLAAQ TIVPVLGVPVQSKALNGLDSLLSIVQMPAGVPTATFAIGTAGARNAALFAVAMLAREEPRYAEALRAFRAQQAERVYGEE LS
Specific function: Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) [H]
COG id: COG0041
COG function: function code F; Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AIR carboxylase family [H]
Homologues:
Organism=Escherichia coli, GI1786734, Length=150, Percent_Identity=57.3333333333333, Blast_Score=144, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6324702, Length=153, Percent_Identity=54.9019607843137, Blast_Score=162, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000031 [H]
Pfam domain/function: PF00731 AIRC [H]
EC number: =5.4.99.18 [H]
Molecular weight: Translated: 16994; Mature: 16862
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAQPLVGVVMGSSSDWDTLSGAAEVLRDFEVPHEARVVSAHRTPQLMADYAAEAEQRG CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCC LRAIIAGAGGAAHLPGMLAAQTIVPVLGVPVQSKALNGLDSLLSIVQMPAGVPTATFAIG CEEEEECCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEEC TAGARNAALFAVAMLAREEPRYAEALRAFRAQQAERVYGEELS CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDAQPLVGVVMGSSSDWDTLSGAAEVLRDFEVPHEARVVSAHRTPQLMADYAAEAEQRG CCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHCC LRAIIAGAGGAAHLPGMLAAQTIVPVLGVPVQSKALNGLDSLLSIVQMPAGVPTATFAIG CEEEEECCCCHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHEEC TAGARNAALFAVAMLAREEPRYAEALRAFRAQQAERVYGEELS CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8816818; 10984043 [H]