| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is purK [H]
Identifier: 121998849
GI number: 121998849
Start: 2275527
End: 2276681
Strand: Reverse
Name: purK [H]
Synonym: Hhal_2070
Alternate gene names: 121998849
Gene position: 2276681-2275527 (Counterclockwise)
Preceding gene: 121998850
Following gene: 121998848
Centisome position: 85.0
GC content: 72.47
Gene sequence:
>1155_bases GTGAGCGGCCCGGCGCCGATCCTCCCCGGTGCAGCCATCGGGATCCTCGGCGCCGGTCAGCTCGGGCGCATGCTCGCCAT GGCGGCGCGCCGCTCGGGCTACCGGGTGCACGTCATCGCCCCCGGCGCCGGGCAGGCGCCGGCCGGGCAGGTGGCGGATC GGGTGCACGATGCCGAGCCCACGGCGGAGCTGCTGTCCAGCCTGGCCGACGAGGTGAGCGTGCTCACCTACGAGTTCGAG AACCTGCCGCGTGCGGCCGTCGAGGCCGCCGCCGAGCGCCTGCCGGTGCGGCCATCGCCCCGTGCTCTGGCCACCACCCA GCACCGTATTCTGGAGAAGACCTTCCTGCGCGAACACGGCCTGCCCGTGGTGCCCTTCGAGGCCGTTCACGGCCCCGAGG AGGCGGCTGCTGCCGTGGCGCGTATCGGTGCCCCAGCGGTGATCAAGAGCGCCGGGCTGGGCTACGACGGCAAGGGCCAG GCCCGGGTGGAGAGCGCCGATGAGGTATCGGCCGCGTGGTCGGCTGTCGGCGCCGACGAGGCGGTGGTCGAGGCCTGCGT CGATCTCGCCATGGAGGTCTCCGTGGTCGCCGCCCGCGGCGTCGATGGCAGCTTCGCCCACTACGGGGTGACCGAGAACC GCCACCGGCACCACATCCTCGATCTATCGATCGGCGACGCCGAGCTCGACCCGGCGGTGTGCCGGCAGGCCGTGGAGATC GCCCGAGCGGTGGGCGAGGGTCTCGACGCTGTCGGCACCTACTGCGTGGAGTTCTTCATCGACGGCGCCGGGCGGCTGAT GGTCAACGAGATCGCCCCGCGCCCGCACAACTCCGGGCATCTGACCATCGAGGGGGCGGCAACCTCGCAGTTCGACCAGC AGCTGCGTGCCATCTGCGGACTGCCCCTGGGCAGTACCCGGCGGTTGGCCCCGGCGGCCATGGTGAACCTGCTCGGCGAC GTCTGGGATGCCGGCACGCCGCCGTGGGCCGAGGTCTACCAGGAGCCGACGGCCACCCTGCACCTCTACGGCAAGGGGGC GCCGAGCCCCGGCCGGAAGATGGGCCATATCACCGTCCTCGGCGAGGACCGGCAGGAGGCCGCCGAGCGCGCCCTGAACC TGCGCAACCGACTGGCACCCCATGTGGTTTCGTAA
Upstream 100 bases:
>100_bases TCGCCGTGGCCATGCTGGCCCGCGAGGAGCCCCGCTACGCTGAAGCCCTGAGGGCGTTCCGTGCCCAACAGGCCGAGCGT GTCTACGGGGAGGAACTCTC
Downstream 100 bases:
>100_bases TCTCATCCCCTACCGCCTCCGCGACCAGGTCGCCTACGACCCGGAGACTGCGGATCAGCGTCTGGCCGCGCTGGCCTTCA CCCCCTGCGGGGCGCTGGAG
Product: phosphoribosylaminoimidazole carboxylase, ATPase
Products: NA
Alternate protein names: N5-CAIR synthase; 5-(carboxyamino)imidazole ribonucleotide synthetase [H]
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSGPAPILPGAAIGILGAGQLGRMLAMAARRSGYRVHVIAPGAGQAPAGQVADRVHDAEPTAELLSSLADEVSVLTYEFE NLPRAAVEAAAERLPVRPSPRALATTQHRILEKTFLREHGLPVVPFEAVHGPEEAAAAVARIGAPAVIKSAGLGYDGKGQ ARVESADEVSAAWSAVGADEAVVEACVDLAMEVSVVAARGVDGSFAHYGVTENRHRHHILDLSIGDAELDPAVCRQAVEI ARAVGEGLDAVGTYCVEFFIDGAGRLMVNEIAPRPHNSGHLTIEGAATSQFDQQLRAICGLPLGSTRRLAPAAMVNLLGD VWDAGTPPWAEVYQEPTATLHLYGKGAPSPGRKMGHITVLGEDRQEAAERALNLRNRLAPHVVS
Sequences:
>Translated_384_residues MSGPAPILPGAAIGILGAGQLGRMLAMAARRSGYRVHVIAPGAGQAPAGQVADRVHDAEPTAELLSSLADEVSVLTYEFE NLPRAAVEAAAERLPVRPSPRALATTQHRILEKTFLREHGLPVVPFEAVHGPEEAAAAVARIGAPAVIKSAGLGYDGKGQ ARVESADEVSAAWSAVGADEAVVEACVDLAMEVSVVAARGVDGSFAHYGVTENRHRHHILDLSIGDAELDPAVCRQAVEI ARAVGEGLDAVGTYCVEFFIDGAGRLMVNEIAPRPHNSGHLTIEGAATSQFDQQLRAICGLPLGSTRRLAPAAMVNLLGD VWDAGTPPWAEVYQEPTATLHLYGKGAPSPGRKMGHITVLGEDRQEAAERALNLRNRLAPHVVS >Mature_383_residues SGPAPILPGAAIGILGAGQLGRMLAMAARRSGYRVHVIAPGAGQAPAGQVADRVHDAEPTAELLSSLADEVSVLTYEFEN LPRAAVEAAAERLPVRPSPRALATTQHRILEKTFLREHGLPVVPFEAVHGPEEAAAAVARIGAPAVIKSAGLGYDGKGQA RVESADEVSAAWSAVGADEAVVEACVDLAMEVSVVAARGVDGSFAHYGVTENRHRHHILDLSIGDAELDPAVCRQAVEIA RAVGEGLDAVGTYCVEFFIDGAGRLMVNEIAPRPHNSGHLTIEGAATSQFDQQLRAICGLPLGSTRRLAPAAMVNLLGDV WDAGTPPWAEVYQEPTATLHLYGKGAPSPGRKMGHITVLGEDRQEAAERALNLRNRLAPHVVS
Specific function: Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) [H]
COG id: COG0026
COG function: function code F; Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1786733, Length=352, Percent_Identity=34.375, Blast_Score=160, Evalue=9e-41, Organism=Escherichia coli, GI1788155, Length=376, Percent_Identity=28.1914893617021, Blast_Score=106, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6324702, Length=376, Percent_Identity=31.3829787234043, Blast_Score=175, Evalue=1e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005875 - InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: =6.3.4.18 [H]
Molecular weight: Translated: 40236; Mature: 40105
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGPAPILPGAAIGILGAGQLGRMLAMAARRSGYRVHVIAPGAGQAPAGQVADRVHDAEP CCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCH TAELLSSLADEVSVLTYEFENLPRAAVEAAAERLPVRPSPRALATTQHRILEKTFLREHG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC LPVVPFEAVHGPEEAAAAVARIGAPAVIKSAGLGYDGKGQARVESADEVSAAWSAVGADE CCCCCHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH AVVEACVDLAMEVSVVAARGVDGSFAHYGVTENRHRHHILDLSIGDAELDPAVCRQAVEI HHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH ARAVGEGLDAVGTYCVEFFIDGAGRLMVNEIAPRPHNSGHLTIEGAATSQFDQQLRAICG HHHHHCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHC LPLGSTRRLAPAAMVNLLGDVWDAGTPPWAEVYQEPTATLHLYGKGAPSPGRKMGHITVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEE GEDRQEAAERALNLRNRLAPHVVS CCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SGPAPILPGAAIGILGAGQLGRMLAMAARRSGYRVHVIAPGAGQAPAGQVADRVHDAEP CCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCH TAELLSSLADEVSVLTYEFENLPRAAVEAAAERLPVRPSPRALATTQHRILEKTFLREHG HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCC LPVVPFEAVHGPEEAAAAVARIGAPAVIKSAGLGYDGKGQARVESADEVSAAWSAVGADE CCCCCHHHCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHH AVVEACVDLAMEVSVVAARGVDGSFAHYGVTENRHRHHILDLSIGDAELDPAVCRQAVEI HHHHHHHHHHHHHHHHEECCCCCCCEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH ARAVGEGLDAVGTYCVEFFIDGAGRLMVNEIAPRPHNSGHLTIEGAATSQFDQQLRAICG HHHHHCCHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHC LPLGSTRRLAPAAMVNLLGDVWDAGTPPWAEVYQEPTATLHLYGKGAPSPGRKMGHITVL CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCEEEEEEECCCCCCCCCCCEEEEE GEDRQEAAERALNLRNRLAPHVVS CCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]