Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is lgt

Identifier: 121998818

GI number: 121998818

Start: 2242710

End: 2243495

Strand: Reverse

Name: lgt

Synonym: Hhal_2039

Alternate gene names: 121998818

Gene position: 2243495-2242710 (Counterclockwise)

Preceding gene: 121998819

Following gene: 121998817

Centisome position: 83.76

GC content: 71.12

Gene sequence:

>786_bases
ATGCTCGTCTATCCCGATATTGACCCCGTCGCCCTCCAGCTCGGGCCGGTGGCCATTCACTGGTACGGCCTGATGTACGT
CGTCGGCTTCCTCGCCGCCTGGGGGCTGGGCCGCTGGCGGGCGCGCCGGTCGGACAGTCCGGTGACCGGGCAGCAGGTGG
ACGACCTGGTCTTCTTCGGCGCCCTGGGGGTGATCGTCGGCGCCAAGCTCGGCTACCACCTCTTCTACAACCTCGACGGC
CTGGCGGCGGATCCGCTGTCCCTGCTGCGCCTGTGGGAGGGGGGCATGTCCTTCCACGGCGGGCTGCTGGGTGTCACCGC
CGCCCTGGGCGTCTACGCCTGGCGCTACCGCATCCCGCTGCTGCGCCTGAGCGACTTCGCCGCCCCCCTGGTGCCCATCG
GCCTGGGGGCCGGGCGGCTGGGCAACTTCATCAACGGCGAGCTGTGGGGCCGGCCCGCCGATGTGCCGTGGGCCATGGTC
TACCCGCCCCTGGGCGACGAGCCGCGCCACCCCTCGCAGCTCTACCAGATGGGGCTGGAGGGCATCGCCCTGTTCATCCT
GCTGTGGTGGTTCTCGGCGAAGCCGCGCGCCCGTGGCGCCGTCACCGGCCTGTTCCTCGCCGCCTACGGCGTCTTCCGCG
CCTTCGTGGAGTTCTTCCGTATGCCGGACGCCCACATCGGTTACCTGGCCTTCGGCTGGCTGACCCTGGGGCAGGTGCTC
ACCCTGCCGATGATCCTCGCTGGCGTGGGGCTGATGGTCTGGGCCTGGCGGCGGCGGGATGCCTGA

Upstream 100 bases:

>100_bases
GGGCCGCCGGGCACGGGGGTCCTTTCTGTCCCGCGCCGACCGCAGTGGGCCGCCGCCGGCGCGCTTGCCTTTCAGGGGCG
GTCTCCACTAGCCTCCGCCC

Downstream 100 bases:

>100_bases
CCCTGGTGAGAGAGAGGTCCCCATGAGGCAATCCTGGAGGCGCCTGGCTCCGTTGGCCGTGACCCTGTGCGCCGTCGCGG
CCCCGGCGGCCGCCGAGATC

Product: prolipoprotein diacylglyceryl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG
LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV
YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL
TLPMILAGVGLMVWAWRRRDA

Sequences:

>Translated_261_residues
MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG
LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV
YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL
TLPMILAGVGLMVWAWRRRDA
>Mature_261_residues
MLVYPDIDPVALQLGPVAIHWYGLMYVVGFLAAWGLGRWRARRSDSPVTGQQVDDLVFFGALGVIVGAKLGYHLFYNLDG
LAADPLSLLRLWEGGMSFHGGLLGVTAALGVYAWRYRIPLLRLSDFAAPLVPIGLGAGRLGNFINGELWGRPADVPWAMV
YPPLGDEPRHPSQLYQMGLEGIALFILLWWFSAKPRARGAVTGLFLAAYGVFRAFVEFFRMPDAHIGYLAFGWLTLGQVL
TLPMILAGVGLMVWAWRRRDA

Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins

COG id: COG0682

COG function: function code M; Prolipoprotein diacylglyceryltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lgt family

Homologues:

Organism=Escherichia coli, GI1789192, Length=279, Percent_Identity=50.5376344086022, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LGT_HALHL (A1WYP1)

Other databases:

- EMBL:   CP000544
- RefSeq:   YP_001003605.1
- STRING:   A1WYP1
- GeneID:   4710023
- GenomeReviews:   CP000544_GR
- KEGG:   hha:Hhal_2039
- eggNOG:   COG0682
- HOGENOM:   HBG450278
- OMA:   AFAPAII
- PhylomeDB:   A1WYP1
- ProtClustDB:   PRK00052
- BioCyc:   HHAL349124:HHAL_2039-MONOMER
- HAMAP:   MF_01147
- InterPro:   IPR001640
- TIGRFAMs:   TIGR00544

Pfam domain/function: PF01790 LGT

EC number: 2.4.99.- [C]

Molecular weight: Translated: 28816; Mature: 28816

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS01311 LGT

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1bc3f750)-; HASH(0x1b3808e8)-; HASH(0x1749a710)-; HASH(0x1b845c6c)-; HASH(0x1bca0b50)-; HASH(0x1b22b318)-; HASH(0x1bab7e54)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA