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The map label for this gene is 121998817

Identifier: 121998817

GI number: 121998817

Start: 2241605

End: 2242687

Strand: Reverse

Name: 121998817

Synonym: Hhal_2038

Alternate gene names: NA

Gene position: 2242687-2241605 (Counterclockwise)

Preceding gene: 121998818

Following gene: 121998814

Centisome position: 83.73

GC content: 70.82

Gene sequence:

>1083_bases
ATGAGGCAATCCTGGAGGCGCCTGGCTCCGTTGGCCGTGACCCTGTGCGCCGTCGCGGCCCCGGCGGCCGCCGAGATCGA
TTGGGACGTCTACGGCCGCGTCGACGTCAGCGCCGAGTACTACGCCGGCGGCAGTTACTCCGCCGGCGACCTGGCCAGCA
ACTCCTCGCGCCTGGGGCTCCGCGTGGCCCACACTCTGGACACCGGGCTGACGGTCTACGGCCGTGTCGAGCGCGCCCTG
GACTACAACCGCGGCGACGGGGCGGATCTGGGCGCGCGGGACGCCTACCTAGGGCTGACCGACGACTGGGGGGTGCTGCG
CCTGGGCTACATGGATACGCCGATGAAGGAGATCCGCAGCCGCGTGGACCTCTTCGGCAGCCAGCTGGGCAACGCCCGCA
ACGTCGTGCGCGCCGGCCACTCGCCGCACTTCGATCAGCGCTTCCCCAATGCGATCCGCTACAGCTCGCCGGAGCAGTCC
GGCTGGGGCGTCGACCTCCAGGGCAGCTTCGATTGGGAAGATCGTGACGAGAGCGATGATCCCTACCCGGCGGACGGCAA
CGACCGCACGGCGATCAGCACCGCCCTGCGCTACACCGGCGAACGCTTCTGGGCGGCGCTGGGCTACGAGCGGGTGGCGG
GTCGCGACGAGGCGCCGAGCAGCGCCGACGCCTACCGTCTGGGGCTGGAGTGGCGGGCCACCGACGCCCTGCGCCTGACC
GCCCTGGTGCAGGCGACCGGCGACGCCTACGAACTCGACGACGACACCTACAGCGACACACTCGCCTACGGCGCCGGGCT
CCTCTACGCCCTGGAAGACGACCTGGATCTGCGCCTGCAGTACTACACCCTGGATGTGGACGCCTCCGGTCACGGGGCCA
GCCTGGTCTCCGTCGGTCCGGTCTTCCACGCCAGTGAGCGACTGCGCCTCTACGCCACCGCCACCTACCTGGGCAATGAC
GACGCCTCGGACCTGGTCCCCTGGGAGGTGGGGCGGACCGCCGGACCCAGCGCCGAGGAGGCCGGGATCGGCACCGGCCG
ATCGGCCTGGGCGGTGGGTTCCGGTATCCGTTTCGACTTCTAG

Upstream 100 bases:

>100_bases
GGGCAGGTGCTCACCCTGCCGATGATCCTCGCTGGCGTGGGGCTGATGGTCTGGGCCTGGCGGCGGCGGGATGCCTGACC
CTGGTGAGAGAGAGGTCCCC

Downstream 100 bases:

>100_bases
GCCCTGCCGCGGGGCGATCACCCCGCCCGGGCAGAAAGGAGCGCGCCCGGGCGAAGACCTCGATCGGCGGGCTAGCCGCT
GTCCCCATTGGTGGGCGCGC

Product: porin

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Porin; Gram-Negative Porin Superfamily

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MRQSWRRLAPLAVTLCAVAAPAAAEIDWDVYGRVDVSAEYYAGGSYSAGDLASNSSRLGLRVAHTLDTGLTVYGRVERAL
DYNRGDGADLGARDAYLGLTDDWGVLRLGYMDTPMKEIRSRVDLFGSQLGNARNVVRAGHSPHFDQRFPNAIRYSSPEQS
GWGVDLQGSFDWEDRDESDDPYPADGNDRTAISTALRYTGERFWAALGYERVAGRDEAPSSADAYRLGLEWRATDALRLT
ALVQATGDAYELDDDTYSDTLAYGAGLLYALEDDLDLRLQYYTLDVDASGHGASLVSVGPVFHASERLRLYATATYLGND
DASDLVPWEVGRTAGPSAEEAGIGTGRSAWAVGSGIRFDF

Sequences:

>Translated_360_residues
MRQSWRRLAPLAVTLCAVAAPAAAEIDWDVYGRVDVSAEYYAGGSYSAGDLASNSSRLGLRVAHTLDTGLTVYGRVERAL
DYNRGDGADLGARDAYLGLTDDWGVLRLGYMDTPMKEIRSRVDLFGSQLGNARNVVRAGHSPHFDQRFPNAIRYSSPEQS
GWGVDLQGSFDWEDRDESDDPYPADGNDRTAISTALRYTGERFWAALGYERVAGRDEAPSSADAYRLGLEWRATDALRLT
ALVQATGDAYELDDDTYSDTLAYGAGLLYALEDDLDLRLQYYTLDVDASGHGASLVSVGPVFHASERLRLYATATYLGND
DASDLVPWEVGRTAGPSAEEAGIGTGRSAWAVGSGIRFDF
>Mature_360_residues
MRQSWRRLAPLAVTLCAVAAPAAAEIDWDVYGRVDVSAEYYAGGSYSAGDLASNSSRLGLRVAHTLDTGLTVYGRVERAL
DYNRGDGADLGARDAYLGLTDDWGVLRLGYMDTPMKEIRSRVDLFGSQLGNARNVVRAGHSPHFDQRFPNAIRYSSPEQS
GWGVDLQGSFDWEDRDESDDPYPADGNDRTAISTALRYTGERFWAALGYERVAGRDEAPSSADAYRLGLEWRATDALRLT
ALVQATGDAYELDDDTYSDTLAYGAGLLYALEDDLDLRLQYYTLDVDASGHGASLVSVGPVFHASERLRLYATATYLGND
DASDLVPWEVGRTAGPSAEEAGIGTGRSAWAVGSGIRFDF

Specific function: Unknown

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39163; Mature: 39163

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSWRRLAPLAVTLCAVAAPAAAEIDWDVYGRVDVSAEYYAGGSYSAGDLASNSSRLGL
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCEE
RVAHTLDTGLTVYGRVERALDYNRGDGADLGARDAYLGLTDDWGVLRLGYMDTPMKEIRS
EEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHH
RVDLFGSQLGNARNVVRAGHSPHFDQRFPNAIRYSSPEQSGWGVDLQGSFDWEDRDESDD
HHHHHHHHCCCHHHHHHCCCCCCCHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
PYPADGNDRTAISTALRYTGERFWAALGYERVAGRDEAPSSADAYRLGLEWRATDALRLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEECEEEECCCCEEEE
ALVQATGDAYELDDDTYSDTLAYGAGLLYALEDDLDLRLQYYTLDVDASGHGASLVSVGP
EEEEECCCCEECCCCCHHHHHHHCCEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECC
VFHASERLRLYATATYLGNDDASDLVPWEVGRTAGPSAEEAGIGTGRSAWAVGSGIRFDF
CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEECC
>Mature Secondary Structure
MRQSWRRLAPLAVTLCAVAAPAAAEIDWDVYGRVDVSAEYYAGGSYSAGDLASNSSRLGL
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEECCCCCCCCCCCCCCCCCEE
RVAHTLDTGLTVYGRVERALDYNRGDGADLGARDAYLGLTDDWGVLRLGYMDTPMKEIRS
EEEEECCCCCEEEEEHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHH
RVDLFGSQLGNARNVVRAGHSPHFDQRFPNAIRYSSPEQSGWGVDLQGSFDWEDRDESDD
HHHHHHHHCCCHHHHHHCCCCCCCHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCC
PYPADGNDRTAISTALRYTGERFWAALGYERVAGRDEAPSSADAYRLGLEWRATDALRLT
CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCEEEECEEEECCCCEEEE
ALVQATGDAYELDDDTYSDTLAYGAGLLYALEDDLDLRLQYYTLDVDASGHGASLVSVGP
EEEEECCCCEECCCCCHHHHHHHCCEEEEEEECCCEEEEEEEEEEEECCCCCCEEEEECC
VFHASERLRLYATATYLGNDDASDLVPWEVGRTAGPSAEEAGIGTGRSAWAVGSGIRFDF
CCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEECCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA