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The map label for this gene is rdoA [H]

Identifier: 121998772

GI number: 121998772

Start: 2198409

End: 2199395

Strand: Reverse

Name: rdoA [H]

Synonym: Hhal_1993

Alternate gene names: 121998772

Gene position: 2199395-2198409 (Counterclockwise)

Preceding gene: 121998778

Following gene: 121998762

Centisome position: 82.11

GC content: 70.52

Gene sequence:

>987_bases
ATGGAAACCCACCACCCCTTCGAGACCCTGGATCCGGATACCGTCCTCAATGCGGTCGAGGCCGTGGGCGGGGTACGCAG
CGACGGCCGGCTACTGCCCCTGAACAGCTATGAGAACCGGGTGTACATGGTCGGAGTGGAGGGGGGTCCGGCCGTGGTGG
CCAAGTTCTACCGCCCCGACCGCTGGGACGACGCGCAGATCCGCGAGGAGCACGCCTTCAGCGAGGAGTTGGTGGCAGCC
GAGGTGCCGGTGGTAGCGCCGCTGCGCTGCGGGGCAGGGACCCTGGCCCACAGCCACGGTTTCCGCATTGCCCTCTACCC
CATGCGGGGCGGACGCATGCTCGAGGTGGACAACCGGGATGTGCTCCGCCGCCTGGGGGCCTATCTGGGGCGGATCCACG
TCGTGGGTGGCGGTGGGGCCTTCGATCATCGCCTCAGCCTCGACCCGGGCGACCACGGCCGGCGGGCGCGGGACTGGCTG
CTGGCCGGAAACTGGCTGCCGCCGCACCTGGAGGAGGCGTACCGCACGGTCACCGACGACCTCTTAGAGGCGATGGCCGC
CTGTTGGGAGCGGGCCGGGGCGGTGCACGCCATCCGTCTGCACGGCGACTTCCACCCAGGCAACGTCCTGCAGACCGAGG
AGGGGTTCCACCTGGTGGACCTGGACGACAGCTGCACCGGTCCCGCCATCCAAGATCTGTGGATGCTGCTGCCCGGCGAG
CGGGCCGAGCGCGAGTCCTTCCTCGAGGCGGTGCTCGAGGGGTACCGGACCTTCTGCGACCTCGACCTGCGCGAGCTGCA
CCTGATCGAGCCGTTGCGCACCCTGCGGCTGGTACGCCACGCTGCGTGGCTGGCGGAGCGCTGGGAGGATCCCGCCTTCC
CCCGCGCCTTCCCCTGGTTTGCTGAGCCCCGGTACTGGGAGGAGCACCTGCTGGCGCTGCGCGAGCAGCTGGGCGCCCTG
GCCGAACCGCCGCTCAGCGCCCAATGA

Upstream 100 bases:

>100_bases
AGGATAGCCGGCCGACCAGGCTGCGGGCTACCCTGACCCGTCACCGACCGGGACGTCCGGTCGAACGAAGTGACCCAAGC
CCTGCTGCAGGAGCCGCTCC

Downstream 100 bases:

>100_bases
AGTGGACCCGGCAGGCACTGACGTAGGCCAGGCCCTCGGCAACCTCGGCCAGCCGTGTGGCCCGCCGGTGCAGCCCGGCG
GCGTCGCAGTCGGGGCGCCA

Product: serine/threonine protein kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
METHHPFETLDPDTVLNAVEAVGGVRSDGRLLPLNSYENRVYMVGVEGGPAVVAKFYRPDRWDDAQIREEHAFSEELVAA
EVPVVAPLRCGAGTLAHSHGFRIALYPMRGGRMLEVDNRDVLRRLGAYLGRIHVVGGGGAFDHRLSLDPGDHGRRARDWL
LAGNWLPPHLEEAYRTVTDDLLEAMAACWERAGAVHAIRLHGDFHPGNVLQTEEGFHLVDLDDSCTGPAIQDLWMLLPGE
RAERESFLEAVLEGYRTFCDLDLRELHLIEPLRTLRLVRHAAWLAERWEDPAFPRAFPWFAEPRYWEEHLLALREQLGAL
AEPPLSAQ

Sequences:

>Translated_328_residues
METHHPFETLDPDTVLNAVEAVGGVRSDGRLLPLNSYENRVYMVGVEGGPAVVAKFYRPDRWDDAQIREEHAFSEELVAA
EVPVVAPLRCGAGTLAHSHGFRIALYPMRGGRMLEVDNRDVLRRLGAYLGRIHVVGGGGAFDHRLSLDPGDHGRRARDWL
LAGNWLPPHLEEAYRTVTDDLLEAMAACWERAGAVHAIRLHGDFHPGNVLQTEEGFHLVDLDDSCTGPAIQDLWMLLPGE
RAERESFLEAVLEGYRTFCDLDLRELHLIEPLRTLRLVRHAAWLAERWEDPAFPRAFPWFAEPRYWEEHLLALREQLGAL
AEPPLSAQ
>Mature_328_residues
METHHPFETLDPDTVLNAVEAVGGVRSDGRLLPLNSYENRVYMVGVEGGPAVVAKFYRPDRWDDAQIREEHAFSEELVAA
EVPVVAPLRCGAGTLAHSHGFRIALYPMRGGRMLEVDNRDVLRRLGAYLGRIHVVGGGGAFDHRLSLDPGDHGRRARDWL
LAGNWLPPHLEEAYRTVTDDLLEAMAACWERAGAVHAIRLHGDFHPGNVLQTEEGFHLVDLDDSCTGPAIQDLWMLLPGE
RAERESFLEAVLEGYRTFCDLDLRELHLIEPLRTLRLVRHAAWLAERWEDPAFPRAFPWFAEPRYWEEHLLALREQLGAL
AEPPLSAQ

Specific function: Probably involved in the extracytoplasmic stress response [H]

COG id: COG2334

COG function: function code R; Putative homoserine kinase type II (protein kinase fold)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rdoA family [H]

Homologues:

Organism=Escherichia coli, GI1790290, Length=320, Percent_Identity=45, Blast_Score=269, Evalue=2e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002575
- InterPro:   IPR011009 [H]

Pfam domain/function: PF01636 APH [H]

EC number: NA

Molecular weight: Translated: 36987; Mature: 36987

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METHHPFETLDPDTVLNAVEAVGGVRSDGRLLPLNSYENRVYMVGVEGGPAVVAKFYRPD
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHCCCC
RWDDAQIREEHAFSEELVAAEVPVVAPLRCGAGTLAHSHGFRIALYPMRGGRMLEVDNRD
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCEEEEEECCCCEEEEECCHH
VLRRLGAYLGRIHVVGGGGAFDHRLSLDPGDHGRRARDWLLAGNWLPPHLEEAYRTVTDD
HHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHH
LLEAMAACWERAGAVHAIRLHGDFHPGNVLQTEEGFHLVDLDDSCTGPAIQDLWMLLPGE
HHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCCC
RAERESFLEAVLEGYRTFCDLDLRELHLIEPLRTLRLVRHAAWLAERWEDPAFPRAFPWF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AEPRYWEEHLLALREQLGALAEPPLSAQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
METHHPFETLDPDTVLNAVEAVGGVRSDGRLLPLNSYENRVYMVGVEGGPAVVAKFYRPD
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEEECCCHHHHHHHCCCC
RWDDAQIREEHAFSEELVAAEVPVVAPLRCGAGTLAHSHGFRIALYPMRGGRMLEVDNRD
CCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHCCCCEEEEEECCCCEEEEECCHH
VLRRLGAYLGRIHVVGGGGAFDHRLSLDPGDHGRRARDWLLAGNWLPPHLEEAYRTVTDD
HHHHHHHHHCEEEEEECCCCCCCEEECCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHH
LLEAMAACWERAGAVHAIRLHGDFHPGNVLQTEEGFHLVDLDDSCTGPAIQDLWMLLPGE
HHHHHHHHHHHCCCEEEEEEECCCCCCCEEECCCCEEEEECCCCCCCHHHHHHHHHCCCC
RAERESFLEAVLEGYRTFCDLDLRELHLIEPLRTLRLVRHAAWLAERWEDPAFPRAFPWF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
AEPRYWEEHLLALREQLGALAEPPLSAQ
CCCCHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]