The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

Click here to switch to the map view.

The map label for this gene is 121998713

Identifier: 121998713

GI number: 121998713

Start: 2132062

End: 2133000

Strand: Reverse

Name: 121998713

Synonym: Hhal_1934

Alternate gene names: NA

Gene position: 2133000-2132062 (Counterclockwise)

Preceding gene: 121998714

Following gene: 121998709

Centisome position: 79.64

GC content: 70.71

Gene sequence:

>939_bases
ATGCATCCGGCCTGGTCCGTCGTCTTCTTCACGGTGCTCTCGGGCACCGGCTACGGGTTCATGGCGCTGTTCGCCCTGAC
CGATGTCTTCGCCCTCGGCGGCCCCGTGGGGCAGCAGGAGCTTCTGGCGGCGGTCGCCATCGCGGCGGTGCTGATCACTG
TCGGCCTGATGTCCTCCGCCGGTCACCTGGCCAACCCGCGCAACGCCTGGCGCTCGTTCGCCCGGTTCCGGACCTCCTGG
CTCTCCCGGGAGGCGGTGCTGGCCGTACTCTTCTATCCGGTGGCCCTGTTCTATGTCGGGCCCTACTTCCTGCTCGGGCT
GGAGCACAACGCGGTCACCGTTTTCTTTGCCGGTCTGACTGCGGTGCTGGCCCTGGCCACCGTGGCAGCGACGGGCATGA
TCTACGCCTGTGTCCGAGCCATCCGGGAGTGGAGCCAGGGGCTCACCCCGGTGAACTACCTGCTCATCGGTCTGGGCCTC
GGCGCCGCCGTTCTCGCCGCCGTGCGCGGTTTCTTCGGCGCTGATCCTGCCCCGGCCGCTGCGATGGGGGTCGGCCTGCT
GGGTGGGGCGGCGGTCACCAAGACGGCCTGGTACCTGTGGAATCGCCGCCCGGGCAGCTCCAGCAAGAGCACGGCCCTGG
GGCTGAGCAGCGGGCCGGTGCGCCTGGTCGACGGCGGCCACACCGCCGGCAATTTCCTCACCTGGGAGTTCCAGTACCCC
CTGCCCGAGGGGCGGGCGCAGTTCTACCGGGGTGTGGCCCTCGTGGTCACCTTCGCACTGCCGATCGCCGCGCTGAGCGC
GGTGGCCCTGGGTGCGGGGGTGCTCTGGGCCTACGTGGCGGCGGCCGTGGCGGTGCTCGGCGCCCTCATCGAGCGCTGGC
TGGTCTTCGCCGAGGCCCGGCACACGGTCCGTCTCTACTACCACGAGGCGCGGCTCTAG

Upstream 100 bases:

>100_bases
TGCCCGAGGCGGCCGACCCGCCGCGGCAGGCGGCGGCCGACCCGGCAACGGTGCAGCACTGGACCAATCGCGTCGTTCAC
CGCTGAGGGAGGATCCACCC

Downstream 100 bases:

>100_bases
GCGCGCCGAGTTACACCGTCCCCAGTGCGATCCAGAGGCACCGGAGCCCCGGCCATTTCGGTCCGGGGCTTCGGTGCCTG
CGTTGGGGGTGGGCACCGGC

Product: DMSO reductase anchor subunit

Products: NA

Alternate protein names: DMSO Reductase Chain C; DMSO Reductase Subunit C

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW
LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL
GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP
LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL

Sequences:

>Translated_312_residues
MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW
LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL
GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP
LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL
>Mature_312_residues
MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW
LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL
GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP
LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL

Specific function: Unknown

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32954; Mature: 32954

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GHLANPRNAWRSFARFRTSWLSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
AVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGLGAAVLAAVRGFFGADPAPAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEEECC
LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVRLYYHEARL
HHEEEEEECCCC
>Mature Secondary Structure
MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GHLANPRNAWRSFARFRTSWLSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH
AVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGLGAAVLAAVRGFFGADPAPAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEEECC
LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEAR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTVRLYYHEARL
HHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA