| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998713
Identifier: 121998713
GI number: 121998713
Start: 2132062
End: 2133000
Strand: Reverse
Name: 121998713
Synonym: Hhal_1934
Alternate gene names: NA
Gene position: 2133000-2132062 (Counterclockwise)
Preceding gene: 121998714
Following gene: 121998709
Centisome position: 79.64
GC content: 70.71
Gene sequence:
>939_bases ATGCATCCGGCCTGGTCCGTCGTCTTCTTCACGGTGCTCTCGGGCACCGGCTACGGGTTCATGGCGCTGTTCGCCCTGAC CGATGTCTTCGCCCTCGGCGGCCCCGTGGGGCAGCAGGAGCTTCTGGCGGCGGTCGCCATCGCGGCGGTGCTGATCACTG TCGGCCTGATGTCCTCCGCCGGTCACCTGGCCAACCCGCGCAACGCCTGGCGCTCGTTCGCCCGGTTCCGGACCTCCTGG CTCTCCCGGGAGGCGGTGCTGGCCGTACTCTTCTATCCGGTGGCCCTGTTCTATGTCGGGCCCTACTTCCTGCTCGGGCT GGAGCACAACGCGGTCACCGTTTTCTTTGCCGGTCTGACTGCGGTGCTGGCCCTGGCCACCGTGGCAGCGACGGGCATGA TCTACGCCTGTGTCCGAGCCATCCGGGAGTGGAGCCAGGGGCTCACCCCGGTGAACTACCTGCTCATCGGTCTGGGCCTC GGCGCCGCCGTTCTCGCCGCCGTGCGCGGTTTCTTCGGCGCTGATCCTGCCCCGGCCGCTGCGATGGGGGTCGGCCTGCT GGGTGGGGCGGCGGTCACCAAGACGGCCTGGTACCTGTGGAATCGCCGCCCGGGCAGCTCCAGCAAGAGCACGGCCCTGG GGCTGAGCAGCGGGCCGGTGCGCCTGGTCGACGGCGGCCACACCGCCGGCAATTTCCTCACCTGGGAGTTCCAGTACCCC CTGCCCGAGGGGCGGGCGCAGTTCTACCGGGGTGTGGCCCTCGTGGTCACCTTCGCACTGCCGATCGCCGCGCTGAGCGC GGTGGCCCTGGGTGCGGGGGTGCTCTGGGCCTACGTGGCGGCGGCCGTGGCGGTGCTCGGCGCCCTCATCGAGCGCTGGC TGGTCTTCGCCGAGGCCCGGCACACGGTCCGTCTCTACTACCACGAGGCGCGGCTCTAG
Upstream 100 bases:
>100_bases TGCCCGAGGCGGCCGACCCGCCGCGGCAGGCGGCGGCCGACCCGGCAACGGTGCAGCACTGGACCAATCGCGTCGTTCAC CGCTGAGGGAGGATCCACCC
Downstream 100 bases:
>100_bases GCGCGCCGAGTTACACCGTCCCCAGTGCGATCCAGAGGCACCGGAGCCCCGGCCATTTCGGTCCGGGGCTTCGGTGCCTG CGTTGGGGGTGGGCACCGGC
Product: DMSO reductase anchor subunit
Products: NA
Alternate protein names: DMSO Reductase Chain C; DMSO Reductase Subunit C
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL
Sequences:
>Translated_312_residues MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL >Mature_312_residues MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSAGHLANPRNAWRSFARFRTSW LSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLTAVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGL GAAVLAAVRGFFGADPAPAAAMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEARHTVRLYYHEARL
Specific function: Unknown
COG id: COG3302
COG function: function code R; DMSO reductase anchor subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32954; Mature: 32954
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC GHLANPRNAWRSFARFRTSWLSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH AVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGLGAAVLAAVRGFFGADPAPAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEEECC LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTVRLYYHEARL HHEEEEEECCCC >Mature Secondary Structure MHPAWSVVFFTVLSGTGYGFMALFALTDVFALGGPVGQQELLAAVAIAAVLITVGLMSSA CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC GHLANPRNAWRSFARFRTSWLSREAVLAVLFYPVALFYVGPYFLLGLEHNAVTVFFAGLT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHH AVLALATVAATGMIYACVRAIREWSQGLTPVNYLLIGLGLGAAVLAAVRGFFGADPAPAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AMGVGLLGGAAVTKTAWYLWNRRPGSSSKSTALGLSSGPVRLVDGGHTAGNFLTWEFQYP HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCEEEEEEECC LPEGRAQFYRGVALVVTFALPIAALSAVALGAGVLWAYVAAAVAVLGALIERWLVFAEAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTVRLYYHEARL HHEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA