The gene/protein map for NC_008789 is currently unavailable.
Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is ydjX [C]

Identifier: 121998698

GI number: 121998698

Start: 2115235

End: 2115951

Strand: Reverse

Name: ydjX [C]

Synonym: Hhal_1919

Alternate gene names: 121998698

Gene position: 2115951-2115235 (Counterclockwise)

Preceding gene: 121998699

Following gene: 121998697

Centisome position: 79.0

GC content: 71.97

Gene sequence:

>717_bases
GTGAACGGAACGACCCTGCGTTGGACCACCCTCGGCGCCCGCGCCGCTCTGGCGATGCTGTTGGTGGCGCTGCTCGGGGC
CCTGTGGGCCGGGAGTGCCCCCGAGTGGGCCTGGGTGCACGGCCAGCTGCAGCAGCTCCGGCAGCTGGCCGAGTCGCAGC
CGGTGCAGGCGGCGCTCGCCTTCCTGGCCCTGCGTTTTTTCTTCTCGGTGGTCTCGGTGCCCGGCAGCGGGGTGCTGACC
GTTGCCGGCGGGGTCATGTTCGGGTTCTGGGCGGGGCTGGCGCTGGTCCTGGTGGCGGTGAGCACCGGCGCGCTGGCGAT
CTTCCTGCTCACCCGCTACGCCCTCCACGATGCGGTGCGCCGCCGGTTCCCGGACGCCCTGCAGCGTGTGGACCGGCACT
GTGCCGATCACGGGCCGAGTGCGCTGTTCCTGCTGCGCATCGCCGAGCCGTTCCCCACTTTCCTGATCAACGCGCTCTTT
GCGCTGACCCGGATGCCGGCGCGGACCTACTTCTGGGTGAGCCTGCTGGGCATGCTCCCTGGCGTGACCATCCTCACCAA
CGCCGGGGCGCATCTGGAGGCGGTCCACACCCCGGCGGAGCTGATGAGCACTGGGATGATCGCCTCGCTGGTGGCGTTGG
GCGCGCTGCCCCTGCTCTCCAGCCTCGCCGCGGCGCGGCTGCGTCGGCGAGGCGCCAGCGGCGGGCCGGAGGGTTAA

Upstream 100 bases:

>100_bases
GGGGCCCGCTGGTCGGCGAGTCGGTGGCGGGTAGCTGCCGGCACCGGATGCCGACCTTCGATCGCACCGAGCTCTTTCTC
CACCCGGCACCGGTGAACCT

Downstream 100 bases:

>100_bases
AAGCACCGGCGAGGTCTCTCGCCCCGGGGGCGGTGGTGTCCGCGTCAGCGGCCTAGACTGGACACTAACCGTTGCTGCGC
CGTTGCGAGGGCCCCGGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Mercuric Reductase; SNARE Associated Golgi Protein-Related Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Dihydrolipoamide Dehydrogenase; Pyridine Nucleotide-Disulphide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; Snare Associated Golgi Protein-Related Protein; SNARE Associated Golgi Protein-Like Protein

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNGTTLRWTTLGARAALAMLLVALLGALWAGSAPEWAWVHGQLQQLRQLAESQPVQAALAFLALRFFFSVVSVPGSGVLT
VAGGVMFGFWAGLALVLVAVSTGALAIFLLTRYALHDAVRRRFPDALQRVDRHCADHGPSALFLLRIAEPFPTFLINALF
ALTRMPARTYFWVSLLGMLPGVTILTNAGAHLEAVHTPAELMSTGMIASLVALGALPLLSSLAAARLRRRGASGGPEG

Sequences:

>Translated_238_residues
MNGTTLRWTTLGARAALAMLLVALLGALWAGSAPEWAWVHGQLQQLRQLAESQPVQAALAFLALRFFFSVVSVPGSGVLT
VAGGVMFGFWAGLALVLVAVSTGALAIFLLTRYALHDAVRRRFPDALQRVDRHCADHGPSALFLLRIAEPFPTFLINALF
ALTRMPARTYFWVSLLGMLPGVTILTNAGAHLEAVHTPAELMSTGMIASLVALGALPLLSSLAAARLRRRGASGGPEG
>Mature_238_residues
MNGTTLRWTTLGARAALAMLLVALLGALWAGSAPEWAWVHGQLQQLRQLAESQPVQAALAFLALRFFFSVVSVPGSGVLT
VAGGVMFGFWAGLALVLVAVSTGALAIFLLTRYALHDAVRRRFPDALQRVDRHCADHGPSALFLLRIAEPFPTFLINALF
ALTRMPARTYFWVSLLGMLPGVTILTNAGAHLEAVHTPAELMSTGMIASLVALGALPLLSSLAAARLRRRGASGGPEG

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25263; Mature: 25263

Theoretical pI: Translated: 11.84; Mature: 11.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGTTLRWTTLGARAALAMLLVALLGALWAGSAPEWAWVHGQLQQLRQLAESQPVQAALA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
FLALRFFFSVVSVPGSGVLTVAGGVMFGFWAGLALVLVAVSTGALAIFLLTRYALHDAVR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFPDALQRVDRHCADHGPSALFLLRIAEPFPTFLINALFALTRMPARTYFWVSLLGMLP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GVTILTNAGAHLEAVHTPAELMSTGMIASLVALGALPLLSSLAAARLRRRGASGGPEG
CHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNGTTLRWTTLGARAALAMLLVALLGALWAGSAPEWAWVHGQLQQLRQLAESQPVQAALA
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
FLALRFFFSVVSVPGSGVLTVAGGVMFGFWAGLALVLVAVSTGALAIFLLTRYALHDAVR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRFPDALQRVDRHCADHGPSALFLLRIAEPFPTFLINALFALTRMPARTYFWVSLLGMLP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
GVTILTNAGAHLEAVHTPAELMSTGMIASLVALGALPLLSSLAAARLRRRGASGGPEG
CHHEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA