| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
Click here to switch to the map view.
The map label for this gene is 121998699
Identifier: 121998699
GI number: 121998699
Start: 2115948
End: 2116523
Strand: Reverse
Name: 121998699
Synonym: Hhal_1920
Alternate gene names: NA
Gene position: 2116523-2115948 (Counterclockwise)
Preceding gene: 121998700
Following gene: 121998698
Centisome position: 79.02
GC content: 73.26
Gene sequence:
>576_bases GTGCGCTTGATCGCCCCCTGCGTGGCCAGGCTGGAACGCTGGAGTGCCCGGTGGCCGCTCCTGTTCCACCTCTACGCCCT GCCGTACCGCCGGTTGGTGGCCCGGGAACTGCGGCTGGCTGGGGTGGTGCCGGGGGAGCGGCTCCTGCATGTCGGTTGCG GGGCCCTGCCGTTCACCGCAGTGCTGGCCGCGCGACTGAGTGGTGCCCGGGTCACCGCCGTGGACCGTTCGGCCGCGGCG GTCGCCGGGGCTCAGGCGGTTGTGGCCCATCTCGGGATGGCGGGGGCGGGGCCCGGCCGGGTCCGTGTCGTGTGTGCCGA TGCGGCGGCCGACCCCCTGCCGGAGATCGATGTGGCCCTGATCGCTCTGCAGGCTTGTCCGCGCGGTCCGATCCTTGCCA ATATCCGCCGCCAGCGTGCGCCGGCGCGCGTGCTCTTTCGTCTGCCCCGGCCCGGCCTGGAGGGTCAGTACGGGGGCCCG CTGGTCGGCGAGTCGGTGGCGGGTAGCTGCCGGCACCGGATGCCGACCTTCGATCGCACCGAGCTCTTTCTCCACCCGGC ACCGGTGAACCTGTGA
Upstream 100 bases:
>100_bases TGATGCTGGTCACCGAGGCGCTGGAACAACTCTACGGCCAGCGGTTGGTGGCGACCGAAGCCGACGGTGCGCGGGTCTTC GTGCCCGCCGGCGGGATGCC
Downstream 100 bases:
>100_bases ACGGAACGACCCTGCGTTGGACCACCCTCGGCGCCCGCGCCGCTCTGGCGATGCTGTTGGTGGCGCTGCTCGGGGCCCTG TGGGCCGGGAGTGCCCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MRLIAPCVARLERWSARWPLLFHLYALPYRRLVARELRLAGVVPGERLLHVGCGALPFTAVLAARLSGARVTAVDRSAAA VAGAQAVVAHLGMAGAGPGRVRVVCADAAADPLPEIDVALIALQACPRGPILANIRRQRAPARVLFRLPRPGLEGQYGGP LVGESVAGSCRHRMPTFDRTELFLHPAPVNL
Sequences:
>Translated_191_residues MRLIAPCVARLERWSARWPLLFHLYALPYRRLVARELRLAGVVPGERLLHVGCGALPFTAVLAARLSGARVTAVDRSAAA VAGAQAVVAHLGMAGAGPGRVRVVCADAAADPLPEIDVALIALQACPRGPILANIRRQRAPARVLFRLPRPGLEGQYGGP LVGESVAGSCRHRMPTFDRTELFLHPAPVNL >Mature_191_residues MRLIAPCVARLERWSARWPLLFHLYALPYRRLVARELRLAGVVPGERLLHVGCGALPFTAVLAARLSGARVTAVDRSAAA VAGAQAVVAHLGMAGAGPGRVRVVCADAAADPLPEIDVALIALQACPRGPILANIRRQRAPARVLFRLPRPGLEGQYGGP LVGESVAGSCRHRMPTFDRTELFLHPAPVNL
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20377; Mature: 20377
Theoretical pI: Translated: 11.67; Mature: 11.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLIAPCVARLERWSARWPLLFHLYALPYRRLVARELRLAGVVPGERLLHVGCGALPFTA CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHH VLAARLSGARVTAVDRSAAAVAGAQAVVAHLGMAGAGPGRVRVVCADAAADPLPEIDVAL HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHH IALQACPRGPILANIRRQRAPARVLFRLPRPGLEGQYGGPLVGESVAGSCRHRMPTFDRT HHHHHCCCCCHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC ELFLHPAPVNL EEEECCCCCCC >Mature Secondary Structure MRLIAPCVARLERWSARWPLLFHLYALPYRRLVARELRLAGVVPGERLLHVGCGALPFTA CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCHHHHHH VLAARLSGARVTAVDRSAAAVAGAQAVVAHLGMAGAGPGRVRVVCADAAADPLPEIDVAL HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHH IALQACPRGPILANIRRQRAPARVLFRLPRPGLEGQYGGPLVGESVAGSCRHRMPTFDRT HHHHHCCCCCHHHHHHHHCCHHHHEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCC ELFLHPAPVNL EEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA