Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is putP [C]

Identifier: 121998678

GI number: 121998678

Start: 2088879

End: 2091170

Strand: Reverse

Name: putP [C]

Synonym: Hhal_1899

Alternate gene names: 121998678

Gene position: 2091170-2088879 (Counterclockwise)

Preceding gene: 121998685

Following gene: 121998677

Centisome position: 78.07

GC content: 65.27

Gene sequence:

>2292_bases
ATGTCAGCTATGGCCATATGGCTGTTGGTGTTTGTAGGCCTGTACTGGGGCTACTGCATCTTCTGGGGTATCAAGGGATA
CCTTTGGTCGCGCACAGCCAGCGACTACTTCGTGGCCGGGCGCTCCGTCAGTATGTGGGTCTTCATACTGGCGGCAACGG
CCACATCGTTCTCAGGGTGGACGTTCGTAGGACACCCGGGCCTGATCTACGAGGACGGCCTGCAGTACGCCTACGCCTCG
TTCTACTCCATCTGCATCCCGTTCACCGGCATGCTGTTCCTCAAGCGCCAATGGATGATTGGCAAGCGTTGGGGTTACGT
CACGCCGGGCGAGATGTTCGCGGACTACTTCCGGACGGACTCGATCCGCATCCTGATCCTCATTGTGGCGCTGATCTTCG
CAGTGCCGTACCTGGGGATTCAGCTGCGCGCCTCGGGCTTCCTGTTCCACGTGCTCACCGACGGCTGGATGGGCGTCGAG
ATCGGCATGTGGCTGCTGTCCGCGGTGGTGCTGTTCTACGTGGCCTCGGGCGGTCTGCGCGCCGTGGCGTACGTGGACGC
GGCGCAGGCTGTTTTGCTCATTGTGGGCATCTTCGTCATCGGCGTCGTGACGCTCTACTACATCGGCGGCTGGAACAACT
TCACGCACGTGATTGCCGGCCTGGTCGAGTGGGAGACCGCCACCGGTGGTGCGGGTGAGGTCTCGCCGGGCATGGTGCCG
GGGGATAGCGGTGCCAGTGGCTATGTCGCCATCCCGGGTGCCATCCAGTGGGTCGGTGCCGCGGCCAACGCCCAGGGCGG
TGTCTGGACCGGCGTCATGAACATCACCTACATGCTGGCGCTGGGCGGCATCATGGCCTCCCCGTCGTTCACCATGTGGG
CGTTCTCGAACCAGAACCCGCGTCCGTTTGCGCCGCAACAGACCTGGATGTCCCCGGTGGGCGTCGGTGCCCTGATGTTC
ACCTTCCTGGCGATCCAGGCGATGGCCACCCACGGCCTGGGGGCCAACACCGAGTTCGCCAAGGACATCTTCTCCGACGA
GCACGGTGAGCAGCTGGCCGAGTACCGGACGCTGTTCGAGGCCTCCGAGGAGCACCAAGGGCTGGTGGACGAGGTGCGCG
AGCGCCTGGACGCCGGCGAGTCCCTGGACGGCATGGATCTCAGCCCGCTGGTACCCACCGCGGTCATGCAGCGCGGCATG
ATCCAGGCCGAGCATCCGGAACTCAGTCGTCAGGAGGTCGAGCAGGTCATCGCGGCCGGTCTGGCGGCGCTGTCCATCGG
TGAGGATCCGCGCAACATGGATCCGGACTGGCTGGCAGCTCTGCCGGGCGATCTCGAGCGGGCCTGGCTGGACCTGTCCC
TGGATCGGGGCGGTGACAGCGAGCTTGTGCCCCAGCTGCTGAACATGCTGGAGGCGGCGGCGCCGTGGCTGGCGGCCCTG
CTGGCGGTCTGTGCCCTGGCGGCCATGCAGTCCACCGGCGCGGCGTACATGTCCACCACCAGTGGCATGTTTACCCGTGA
CCTGCTGCGTCGCTACATCATGCCCAGTGCCAGCAACCAGGCCCAGGTGGTGGCGGGCCGGGTCTTCGTCACCATCCTGG
TGCTTGCGGCCCTGACCGTGGCGACGGTGACCACCGACGCCCTGGTGCTGCTCGGCGGTCTGGCCACCGCCATGGGTACG
CAGATGTGGGTGCCGCTGGCCGCCATCTGCTTCTTCCCCTGGCTTACCCGTCCGGGTGTGGTCTGGGGGCTGGGCGTTGG
CATCGTTGCCGTGCTGATGACCGAGAACATCGGCATCGACCTGCTGGCGGCGGCGGGCGTCGACGTGCCCTGGGGCCGTT
GGCCGCTGACCATCCACTCTGCCGGGTGGGGCCTGGTGCTTAACGCCCTGGTGGCCGTGGTCGTCTCGGCGATGACGCAG
AACAACAAGGAAGACTACGATCACCGCATGACGGTGCACGCCTTCCTTCGCGAGCATGCGTCACTGCCGGCCGAGAAGCG
CCACCTGATCCCGATCGCCTTCACCATCGTCATCGGCTGGTGGATCTTCGCCTTCGGTCCGGGCGCCCTGCTGGGCAACT
GGGTCTTCGGTGATCCGACCAACCCCGATACCTGGTGGTTCCTCGGCCTGCCGTCCATCGTGGTCTGGCAGCTGCTGTGG
TGGGTGATCGGTATCTACATGATGTGGTTCACCTGCTACAAGTGTGAGATGAGCACCGTGCCCGAGAAGGAAATCGAGGT
CCTCTTCGACGAGGATCAGGGCAAGGCCCGCTACGACGTGAGCCGTCCGTAA

Upstream 100 bases:

>100_bases
GCGCTCTGGGGCGGGTGGCACGGTTTTCGCTAGAGACCGCCGACCCCTGCGGGGGGATTGCAACACCTCATAACTCAAGA
AATGTGAGGGGGAGACACGA

Downstream 100 bases:

>100_bases
CGGGTCGGTGGTCATCGACCACTGCAACCGGGTAGCGCAGGGGGTCGTTCCGGCCCCCTGCGCCCCTCCCTTCAAGCGGT
TTCATTCGAGCGAGCGATAT

Product: Na+/solute symporter

Products: NA

Alternate protein names: Pantothenate Permease; Na+/Proline Symporter; SSS Sodium Solute Transporter Superfamily; Sodium/Pantothenate Symporter; Transporter SoluteSodium Symporter Family Protein; Na+/Pantothenate Symporter PanF

Number of amino acids: Translated: 763; Mature: 762

Protein sequence:

>763_residues
MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYAS
FYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVE
IGMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP
GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMF
TFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGM
IQAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL
LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGT
QMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQ
NNKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW
WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP

Sequences:

>Translated_763_residues
MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYAS
FYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVE
IGMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP
GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMF
TFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGM
IQAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL
LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGT
QMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQ
NNKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW
WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP
>Mature_762_residues
SAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGWTFVGHPGLIYEDGLQYAYASF
YSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTDSIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEI
GMWLLSAVVLFYVASGGLRAVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVPG
DSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNPRPFAPQQTWMSPVGVGALMFT
FLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFEASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMI
QAEHPELSRQEVEQVIAAGLAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAALL
AVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTVATVTTDALVLLGGLATAMGTQ
MWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGIDLLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQN
NKEDYDHRMTVHAFLREHASLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLWW
VIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular L-Proline. This Protein Is Also Capable Of Using Lithium As The Transport Cation. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83380; Mature: 83249

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGW
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCE
TFVGHPGLIYEDGLQYAYASFYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTD
EEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
SIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEIGMWLLSAVVLFYVASGGLR
CHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE
AVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNP
CCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RPFAPQQTWMSPVGVGALMFTFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFE
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
ASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMIQAEHPELSRQEVEQVIAAG
CCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL
HHHHCCCCCCCCCCCHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTV
HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ATVTTDALVLLGGLATAMGTQMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE
LLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQNNKEDYDHRMTVHAFLREHA
EEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH
WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SAMAIWLLVFVGLYWGYCIFWGIKGYLWSRTASDYFVAGRSVSMWVFILAATATSFSGW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCCE
TFVGHPGLIYEDGLQYAYASFYSICIPFTGMLFLKRQWMIGKRWGYVTPGEMFADYFRTD
EEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCC
SIRILILIVALIFAVPYLGIQLRASGFLFHVLTDGWMGVEIGMWLLSAVVLFYVASGGLR
CHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCE
AVAYVDAAQAVLLIVGIFVIGVVTLYYIGGWNNFTHVIAGLVEWETATGGAGEVSPGMVP
EEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GDSGASGYVAIPGAIQWVGAAANAQGGVWTGVMNITYMLALGGIMASPSFTMWAFSNQNP
CCCCCCCEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
RPFAPQQTWMSPVGVGALMFTFLAIQAMATHGLGANTEFAKDIFSDEHGEQLAEYRTLFE
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
ASEEHQGLVDEVRERLDAGESLDGMDLSPLVPTAVMQRGMIQAEHPELSRQEVEQVIAAG
CCHHCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
LAALSIGEDPRNMDPDWLAALPGDLERAWLDLSLDRGGDSELVPQLLNMLEAAAPWLAAL
HHHHCCCCCCCCCCCHHHHHCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LAVCALAAMQSTGAAYMSTTSGMFTRDLLRRYIMPSASNQAQVVAGRVFVTILVLAALTV
HHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ATVTTDALVLLGGLATAMGTQMWVPLAAICFFPWLTRPGVVWGLGVGIVAVLMTENIGID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEE
LLAAAGVDVPWGRWPLTIHSAGWGLVLNALVAVVVSAMTQNNKEDYDHRMTVHAFLREHA
EEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
SLPAEKRHLIPIAFTIVIGWWIFAFGPGALLGNWVFGDPTNPDTWWFLGLPSIVVWQLLW
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHH
WVIGIYMMWFTCYKCEMSTVPEKEIEVLFDEDQGKARYDVSRP
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA