| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is bhuA [H]
Identifier: 121998685
GI number: 121998685
Start: 2099951
End: 2102032
Strand: Reverse
Name: bhuA [H]
Synonym: Hhal_1906
Alternate gene names: 121998685
Gene position: 2102032-2099951 (Counterclockwise)
Preceding gene: 121998686
Following gene: 121998678
Centisome position: 78.48
GC content: 71.61
Gene sequence:
>2082_bases ATGAACACCCATGAACCAACGGCTGTGCGCCTGTTAGGCGCCCTGCTGGCTGCGGCGGTCTCGGTACCGGCCGGGGCCGC GGAGGAGGGCGATGAGCACGCGTCCTCCACCAGCCTCTCGCCGGTGCGCATCGAGGCCGGCGGCGATCCCCTGGGCCGCG GCGTGGCCAGCGAAGCCCTGCAGCGCCGCCAGGCCTCGAGCAGCGCCGAGATCTTCCGCGGCGAGGCCTCGGCCGGGGTC GGCGGTGGCAGCCGCAACGCGCAGCGGCTCTACCTGCGCGGTGTCGAGTCCAACAACCTCAACGTCACCGTGGACGGGGC CCGCCAGGGGCGGGACCTCCACCAGCACCGCGGCGGCCTCACCGGTCTGGACCCGGATCTGCTGCGGGCGGCCGATCTCG ACCCGCGTCCGGCGGCGGACCAGGGCCCCGGTGCGCTGGGCGGTTCGGTGCGCTTCGAGACGGTGGACGCCCAGGATCTG CTCGACCCCGACGAAGAGACTGGGGCCCGCCTGCGCGCCGGCTACGCCAGCGCCGACGAGGCCGAGCGCGGCTCGGCCAC CGCCTTCGGCCGGCTGGGCGGCGACTGGGGCGCCCTGGCCCATATCGGTGCGGTCAACCGGGACGACTACCGGGTCGGCG GCGGCGACACCATGCCGTACTCCGGCGGGCGCGATCGCGACTACCTGGCGCGCATCAGCCGCGTGCCGGCATCGGGCCAT CAGCTGCGTCTCGGCGTGCAGCGCAACACCTTCGAGGGGGATCACCATTACGGCTCCTGGGGCAGTGACTTCGGTGATCC GAGCGAGACGACACGCCAAGACCCGGTGGGCCAGGAGCAGCGCCGCGACACCTGGACCGCCGAGCACCGCTACCGCCCGG CCGACCCCCACGTGGACTGGCAGGCCCGGGTCTACCGCAACGACAACCGCCTGGAACGCCAGGACGACAACACCACCACC CGCGCCGTCGAGCAAGGCGGCGACCTGCGCAACACCTTCACCCTGGACGCCGGGCCGACCCGTCACCGGCTCACCGCCGG TTTCGACTACTACACCGAGGACGGGCGCAGCGACCCCCACGGAGGCGGCTCGAGGCTCAGTCACCAGTCGCGCAACTTCG GCGCCTTCGTGCAGAACCGCATGGCCTGGGAGCGGTTGCGCCTCTCCGCCGGGCTGCGTTACGACGACTATGTCACCGAC CTGCAGGAGGAGACCCTCCAAGGCGATGCCGTCTCGCCCAACTTCAGTGCGGAGTACGACCTGACTGCCGGGTGGACCGC CTTCGCCGGCTACGGCGAGGCGGTCAGTGGCGCCGGGATCCTGCCGATCGGCTGGCTGGCCTACATCGACGACGAAGAGA CCAATCTGAATGACGGCGAGCCGTTCGAGGCCGAGGAGTCCCGCCGGCGCGAGGGCGGCCTGCGCTACCAGGGGCGGGAT CTGATCACGGCCCGGGACCGCTTCGACTTCGAGGCGACGCTCTTCGAGACGCGGATCAAAAACAGTGTTGAGCGGGATGA CCCGTGGGGCACACCGCACCAGCACAACCTGCCGCCCGATAGGCGACATGACGCGTTCTGGGATGAGGACGCCCCGCTGG TTGGGGGCGTCCGCAACCGCCCCGATCCGGTCCGCCTGCGCGGCTACGAACTGCGCGCCGCCTGGGGCGTGGGCCCCTAC GACGCCCGGCTTTCGTTCCTCAGCGCCGAGGCCGTGGACGACGACGGCGACCCGGTGGGGGTGATCCGGCGCCTGGGTGG GGGCGGCGGTGACCGTCTGGTCTTCGATCAGCGCTGGGCGGCCCACGAGACCCTGACCCTGGGCTACACGCTCACCTGGG TGGGGGATCACACCGACGTCCCCGACGACGAGCCGGAGCGCGACGGCTACCAACTCCACGACGTGCAGGCCGAGTGGCAG CCGTGGGCCGACGACCGCCTGACCCTGGCGCTGGCGGTGAACAACCTCTTCGACGAGCAGTACGCCGAGCACACCTCCCT GGCGGTGGAGGAGAACGACGAGTGGCAGATTCGCGACGAGCCCGGCCGGGACGTTCGGGTGACCGGCACCCTGCGCTTTT GA
Upstream 100 bases:
>100_bases ACAGTCGGTCTGACCCGCCTTCTGGCGCGGCGGCGTTTCGTCGTCGGGCCTCCCCCAGCAGAAGTCGCCAGCGCCCGTCG CAAGACGAGGAGCGCTGACC
Downstream 100 bases:
>100_bases GCCGGGTGCCGGGCTAGCCGCCGGCGGGCGGGTTGCCCAGGGCCGCCTCGAGGAGGTCGGCAATCCGCCCGTCCAGCCAG TAGCCCGGGCGTCCGGGCTG
Product: TonB-dependent receptor
Products: NA
Alternate protein names: Brucella heme uptake protein A [H]
Number of amino acids: Translated: 693; Mature: 693
Protein sequence:
>693_residues MNTHEPTAVRLLGALLAAAVSVPAGAAEEGDEHASSTSLSPVRIEAGGDPLGRGVASEALQRRQASSSAEIFRGEASAGV GGGSRNAQRLYLRGVESNNLNVTVDGARQGRDLHQHRGGLTGLDPDLLRAADLDPRPAADQGPGALGGSVRFETVDAQDL LDPDEETGARLRAGYASADEAERGSATAFGRLGGDWGALAHIGAVNRDDYRVGGGDTMPYSGGRDRDYLARISRVPASGH QLRLGVQRNTFEGDHHYGSWGSDFGDPSETTRQDPVGQEQRRDTWTAEHRYRPADPHVDWQARVYRNDNRLERQDDNTTT RAVEQGGDLRNTFTLDAGPTRHRLTAGFDYYTEDGRSDPHGGGSRLSHQSRNFGAFVQNRMAWERLRLSAGLRYDDYVTD LQEETLQGDAVSPNFSAEYDLTAGWTAFAGYGEAVSGAGILPIGWLAYIDDEETNLNDGEPFEAEESRRREGGLRYQGRD LITARDRFDFEATLFETRIKNSVERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNRPDPVRLRGYELRAAWGVGPY DARLSFLSAEAVDDDGDPVGVIRRLGGGGGDRLVFDQRWAAHETLTLGYTLTWVGDHTDVPDDEPERDGYQLHDVQAEWQ PWADDRLTLALAVNNLFDEQYAEHTSLAVEENDEWQIRDEPGRDVRVTGTLRF
Sequences:
>Translated_693_residues MNTHEPTAVRLLGALLAAAVSVPAGAAEEGDEHASSTSLSPVRIEAGGDPLGRGVASEALQRRQASSSAEIFRGEASAGV GGGSRNAQRLYLRGVESNNLNVTVDGARQGRDLHQHRGGLTGLDPDLLRAADLDPRPAADQGPGALGGSVRFETVDAQDL LDPDEETGARLRAGYASADEAERGSATAFGRLGGDWGALAHIGAVNRDDYRVGGGDTMPYSGGRDRDYLARISRVPASGH QLRLGVQRNTFEGDHHYGSWGSDFGDPSETTRQDPVGQEQRRDTWTAEHRYRPADPHVDWQARVYRNDNRLERQDDNTTT RAVEQGGDLRNTFTLDAGPTRHRLTAGFDYYTEDGRSDPHGGGSRLSHQSRNFGAFVQNRMAWERLRLSAGLRYDDYVTD LQEETLQGDAVSPNFSAEYDLTAGWTAFAGYGEAVSGAGILPIGWLAYIDDEETNLNDGEPFEAEESRRREGGLRYQGRD LITARDRFDFEATLFETRIKNSVERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNRPDPVRLRGYELRAAWGVGPY DARLSFLSAEAVDDDGDPVGVIRRLGGGGGDRLVFDQRWAAHETLTLGYTLTWVGDHTDVPDDEPERDGYQLHDVQAEWQ PWADDRLTLALAVNNLFDEQYAEHTSLAVEENDEWQIRDEPGRDVRVTGTLRF >Mature_693_residues MNTHEPTAVRLLGALLAAAVSVPAGAAEEGDEHASSTSLSPVRIEAGGDPLGRGVASEALQRRQASSSAEIFRGEASAGV GGGSRNAQRLYLRGVESNNLNVTVDGARQGRDLHQHRGGLTGLDPDLLRAADLDPRPAADQGPGALGGSVRFETVDAQDL LDPDEETGARLRAGYASADEAERGSATAFGRLGGDWGALAHIGAVNRDDYRVGGGDTMPYSGGRDRDYLARISRVPASGH QLRLGVQRNTFEGDHHYGSWGSDFGDPSETTRQDPVGQEQRRDTWTAEHRYRPADPHVDWQARVYRNDNRLERQDDNTTT RAVEQGGDLRNTFTLDAGPTRHRLTAGFDYYTEDGRSDPHGGGSRLSHQSRNFGAFVQNRMAWERLRLSAGLRYDDYVTD LQEETLQGDAVSPNFSAEYDLTAGWTAFAGYGEAVSGAGILPIGWLAYIDDEETNLNDGEPFEAEESRRREGGLRYQGRD LITARDRFDFEATLFETRIKNSVERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNRPDPVRLRGYELRAAWGVGPY DARLSFLSAEAVDDDGDPVGVIRRLGGGGGDRLVFDQRWAAHETLTLGYTLTWVGDHTDVPDDEPERDGYQLHDVQAEWQ PWADDRLTLALAVNNLFDEQYAEHTSLAVEENDEWQIRDEPGRDVRVTGTLRF
Specific function: Heme transporter playing an important role in stationary-phase iron acquisition and required for maintenance of chronic infection in mice [H]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76365; Mature: 76365
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTHEPTAVRLLGALLAAAVSVPAGAAEEGDEHASSTSLSPVRIEAGGDPLGRGVASEAL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHH QRRQASSSAEIFRGEASAGVGGGSRNAQRLYLRGVESNNLNVTVDGARQGRDLHQHRGGL HHHHCCCCHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHCCCC TGLDPDLLRAADLDPRPAADQGPGALGGSVRFETVDAQDLLDPDEETGARLRAGYASADE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHCCCEECCCCCCCC AERGSATAFGRLGGDWGALAHIGAVNRDDYRVGGGDTMPYSGGRDRDYLARISRVPASGH CCCCCCEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC QLRLGVQRNTFEGDHHYGSWGSDFGDPSETTRQDPVGQEQRRDTWTAEHRYRPADPHVDW EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCC QARVYRNDNRLERQDDNTTTRAVEQGGDLRNTFTLDAGPTRHRLTAGFDYYTEDGRSDPH EEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC GGGSRLSHQSRNFGAFVQNRMAWERLRLSAGLRYDDYVTDLQEETLQGDAVSPNFSAEYD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LTAGWTAFAGYGEAVSGAGILPIGWLAYIDDEETNLNDGEPFEAEESRRREGGLRYQGRD CCCCCHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCEECCCE LITARDRFDFEATLFETRIKNSVERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNR EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDPVRLRGYELRAAWGVGPYDARLSFLSAEAVDDDGDPVGVIRRLGGGGGDRLVFDQRWA CCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCC AHETLTLGYTLTWVGDHTDVPDDEPERDGYQLHDVQAEWQPWADDRLTLALAVNNLFDEQ CCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHH YAEHTSLAVEENDEWQIRDEPGRDVRVTGTLRF HHHHHEEEEECCCCEEEECCCCCEEEEEEEECC >Mature Secondary Structure MNTHEPTAVRLLGALLAAAVSVPAGAAEEGDEHASSTSLSPVRIEAGGDPLGRGVASEAL CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHH QRRQASSSAEIFRGEASAGVGGGSRNAQRLYLRGVESNNLNVTVDGARQGRDLHQHRGGL HHHHCCCCHHHEECCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHHHHCCCC TGLDPDLLRAADLDPRPAADQGPGALGGSVRFETVDAQDLLDPDEETGARLRAGYASADE CCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECHHHCCCCCHHHCCCEECCCCCCCC AERGSATAFGRLGGDWGALAHIGAVNRDDYRVGGGDTMPYSGGRDRDYLARISRVPASGH CCCCCCEEECCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCCCCCC QLRLGVQRNTFEGDHHYGSWGSDFGDPSETTRQDPVGQEQRRDTWTAEHRYRPADPHVDW EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHCCCCCCCCCCCC QARVYRNDNRLERQDDNTTTRAVEQGGDLRNTFTLDAGPTRHRLTAGFDYYTEDGRSDPH EEEEEECCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCC GGGSRLSHQSRNFGAFVQNRMAWERLRLSAGLRYDDYVTDLQEETLQGDAVSPNFSAEYD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEE LTAGWTAFAGYGEAVSGAGILPIGWLAYIDDEETNLNDGEPFEAEESRRREGGLRYQGRD CCCCCHHHCCCCCHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCEECCCE LITARDRFDFEATLFETRIKNSVERDDPWGTPHQHNLPPDRRHDAFWDEDAPLVGGVRNR EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PDPVRLRGYELRAAWGVGPYDARLSFLSAEAVDDDGDPVGVIRRLGGGGGDRLVFDQRWA CCCEEEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEEEECCCCC AHETLTLGYTLTWVGDHTDVPDDEPERDGYQLHDVQAEWQPWADDRLTLALAVNNLFDEQ CCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHH YAEHTSLAVEENDEWQIRDEPGRDVRVTGTLRF HHHHHEEEEECCCCEEEECCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA