Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121998667

Identifier: 121998667

GI number: 121998667

Start: 2073682

End: 2074164

Strand: Reverse

Name: 121998667

Synonym: Hhal_1888

Alternate gene names: NA

Gene position: 2074164-2073682 (Counterclockwise)

Preceding gene: 121998668

Following gene: 121998666

Centisome position: 77.44

GC content: 68.32

Gene sequence:

>483_bases
ATGAGGCGATCACAGTGGCACTGGCTGATCCTCCCGCTCGGTCTGGTCCTCGCTTCCGCGGCGTCGGGGGAGGATTTGCT
CTTCGTCCAGAGTGAGCAGGGCGAGGTCTACGCCGAGGCAAGCCTGGATGCCGAGGTGGTGAGGCGGGTCCCCCGCGGCA
CGGAACTGGAACAGCTGGCCTCCGAGGGGGTGTGGTATCGGGTGCGTCACGACGGGGAAGAGGGCTGGGTGTCGCGCCTG
GTGGTTGCCACGCAGCCGCCTATGGAGCGGGACAGCATCCTCGATGGTGAGGCGCCGGATATCGACGACTCACGCCGCCG
CTCGTCGGAGGTGGCCAGTGCCGCTGCGGCCCGTGGCCTGACCCCGGAGCAGCGCGAGCGCCTGAGTGACCGCGACATGG
CGGACTATCGGGCGCTGGCCGAACTGGAAGAGCAGGCGGTGGATGAAGACGAACTCCGCGCCTTTCGGGAGGCGTTGCGA
TGA

Upstream 100 bases:

>100_bases
TGCCGCAGGGGTGGCAGTGCCGGTACGTGGATCGGGTCCAGGTCCGGGGGCGGCAGCGCATGCTTGATCTCTATGAACCC
ATCGCGCCACCGGAGGGAGC

Downstream 100 bases:

>100_bases
GGATGCGAACGAAGCCGGGACGGCCACTGGGATTCAGCGCCGCAGCGCTTCTGATCTGCGCCCTGTGGTTCAGCGTGTTC
TCGCCGGTGCCAGTCGGTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MRRSQWHWLILPLGLVLASAASGEDLLFVQSEQGEVYAEASLDAEVVRRVPRGTELEQLASEGVWYRVRHDGEEGWVSRL
VVATQPPMERDSILDGEAPDIDDSRRRSSEVASAAAARGLTPEQRERLSDRDMADYRALAELEEQAVDEDELRAFREALR

Sequences:

>Translated_160_residues
MRRSQWHWLILPLGLVLASAASGEDLLFVQSEQGEVYAEASLDAEVVRRVPRGTELEQLASEGVWYRVRHDGEEGWVSRL
VVATQPPMERDSILDGEAPDIDDSRRRSSEVASAAAARGLTPEQRERLSDRDMADYRALAELEEQAVDEDELRAFREALR
>Mature_160_residues
MRRSQWHWLILPLGLVLASAASGEDLLFVQSEQGEVYAEASLDAEVVRRVPRGTELEQLASEGVWYRVRHDGEEGWVSRL
VVATQPPMERDSILDGEAPDIDDSRRRSSEVASAAAARGLTPEQRERLSDRDMADYRALAELEEQAVDEDELRAFREALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18061; Mature: 18061

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSQWHWLILPLGLVLASAASGEDLLFVQSEQGEVYAEASLDAEVVRRVPRGTELEQLA
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHHHHCCCCCCHHHHH
SEGVWYRVRHDGEEGWVSRLVVATQPPMERDSILDGEAPDIDDSRRRSSEVASAAAARGL
HCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TPEQRERLSDRDMADYRALAELEEQAVDEDELRAFREALR
CHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
>Mature Secondary Structure
MRRSQWHWLILPLGLVLASAASGEDLLFVQSEQGEVYAEASLDAEVVRRVPRGTELEQLA
CCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCHHHHHHCCCCCCHHHHH
SEGVWYRVRHDGEEGWVSRLVVATQPPMERDSILDGEAPDIDDSRRRSSEVASAAAARGL
HCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
TPEQRERLSDRDMADYRALAELEEQAVDEDELRAFREALR
CHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA