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The map label for this gene is yfgC [C]

Identifier: 121998666

GI number: 121998666

Start: 2072738

End: 2073685

Strand: Reverse

Name: yfgC [C]

Synonym: Hhal_1887

Alternate gene names: 121998666

Gene position: 2073685-2072738 (Counterclockwise)

Preceding gene: 121998667

Following gene: 121998665

Centisome position: 77.42

GC content: 67.09

Gene sequence:

>948_bases
ATGAGGATGCGAACGAAGCCGGGACGGCCACTGGGATTCAGCGCCGCAGCGCTTCTGATCTGCGCCCTGTGGTTCAGCGT
GTTCTCGCCGGTGCCAGTCGGTGGGGCGCAGGGCGGCGTCAACGGCACGGGCCACACCGGGGCCGGCGACGCCGGTGGGG
TCCAGGCCGTCGACTTCAATCCGCGGCAGGCACGCCAACGCCTGGGCCAGGTCCGCCAGTTCGATTTCGATGCTGAGGAC
GTGGCTGTCGAGATCGACTTCGGGCGCGAGGTGGCAGCCCATCTGCTGGGGCGCCACCAGCTCGACCAGGCCGACCGTCG
GGATCGCTACGTGGCTTTGGTGGGCCACTCCCTGGTCCGCAATGCCAACCGCCCGGAGATCGACTTCCGGTTTGCGGTCC
TCGACACCGACGCGGTGAAGGCGTTTGCCACGCCGGGCGGCTACATCTTCGTCTCCCGGGGCGCCCTTGAACTCATGGAG
GACGAATCGGAGCTGGCCGGGGTGCTGGCCCACGAGATCATCCACGTCACCGAACGGCATATCGTTAAGGAACTGGATAT
CACGAGCGGTGAAGGGGGGATCGCCTCCGGCCTCGCACGCATCGTCGGGGGTTCCGGGGACCCGGCCCGCGCCGCCTTTG
CGCAGGCGGTGGATCAGGCGCTGGAGATTCTCCTGGAAGAGGGGCTGAGCAAGGAGGACGAGTTGGAGGCGGATCGAATG
GGCACGTTGCTGGCGGCTCAGTCGGGCTACGACCCCGAGGGGCTTCGTCGGTACCTCGAGCGGCTCCGTGACCACTCGGG
CGGCGAGACCGTGGAAGACGGTGTCTCCGATACCCATCCGCCGCTGGATGAACGGCTTCAAGCACTGGAGGGCTTCATGG
TGGAGATGGGGCTGGCTGACGCGGAGCGACCGCGCATGGGCGACCGATTCCAGGAGAACATGCAATGA

Upstream 100 bases:

>100_bases
GCCTGAGTGACCGCGACATGGCGGACTATCGGGCGCTGGCCGAACTGGAAGAGCAGGCGGTGGATGAAGACGAACTCCGC
GCCTTTCGGGAGGCGTTGCG

Downstream 100 bases:

>100_bases
GTCGACTCTTCGCCGGGCGGAGCGGGTGCAGCAGCCGCGTCGTGCAATCCGCCGTCGCTGTCGTGGCGATGGTCGGGATC
GCCACCGAGGCAAGCGCCAT

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MRMRTKPGRPLGFSAAALLICALWFSVFSPVPVGGAQGGVNGTGHTGAGDAGGVQAVDFNPRQARQRLGQVRQFDFDAED
VAVEIDFGREVAAHLLGRHQLDQADRRDRYVALVGHSLVRNANRPEIDFRFAVLDTDAVKAFATPGGYIFVSRGALELME
DESELAGVLAHEIIHVTERHIVKELDITSGEGGIASGLARIVGGSGDPARAAFAQAVDQALEILLEEGLSKEDELEADRM
GTLLAAQSGYDPEGLRRYLERLRDHSGGETVEDGVSDTHPPLDERLQALEGFMVEMGLADAERPRMGDRFQENMQ

Sequences:

>Translated_315_residues
MRMRTKPGRPLGFSAAALLICALWFSVFSPVPVGGAQGGVNGTGHTGAGDAGGVQAVDFNPRQARQRLGQVRQFDFDAED
VAVEIDFGREVAAHLLGRHQLDQADRRDRYVALVGHSLVRNANRPEIDFRFAVLDTDAVKAFATPGGYIFVSRGALELME
DESELAGVLAHEIIHVTERHIVKELDITSGEGGIASGLARIVGGSGDPARAAFAQAVDQALEILLEEGLSKEDELEADRM
GTLLAAQSGYDPEGLRRYLERLRDHSGGETVEDGVSDTHPPLDERLQALEGFMVEMGLADAERPRMGDRFQENMQ
>Mature_315_residues
MRMRTKPGRPLGFSAAALLICALWFSVFSPVPVGGAQGGVNGTGHTGAGDAGGVQAVDFNPRQARQRLGQVRQFDFDAED
VAVEIDFGREVAAHLLGRHQLDQADRRDRYVALVGHSLVRNANRPEIDFRFAVLDTDAVKAFATPGGYIFVSRGALELME
DESELAGVLAHEIIHVTERHIVKELDITSGEGGIASGLARIVGGSGDPARAAFAQAVDQALEILLEEGLSKEDELEADRM
GTLLAAQSGYDPEGLRRYLERLRDHSGGETVEDGVSDTHPPLDERLQALEGFMVEMGLADAERPRMGDRFQENMQ

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=182, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI87081800, Length=227, Percent_Identity=28.6343612334802, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 34100; Mature: 34100

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMRTKPGRPLGFSAAALLICALWFSVFSPVPVGGAQGGVNGTGHTGAGDAGGVQAVDFN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
PRQARQRLGQVRQFDFDAEDVAVEIDFGREVAAHLLGRHQLDQADRRDRYVALVGHSLVR
HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHH
NANRPEIDFRFAVLDTDAVKAFATPGGYIFVSRGALELMEDESELAGVLAHEIIHVTERH
CCCCCCCEEEEEEECCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKELDITSGEGGIASGLARIVGGSGDPARAAFAQAVDQALEILLEEGLSKEDELEADRM
HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GTLLAAQSGYDPEGLRRYLERLRDHSGGETVEDGVSDTHPPLDERLQALEGFMVEMGLAD
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
AERPRMGDRFQENMQ
CCCCCCCHHHHHHCC
>Mature Secondary Structure
MRMRTKPGRPLGFSAAALLICALWFSVFSPVPVGGAQGGVNGTGHTGAGDAGGVQAVDFN
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCC
PRQARQRLGQVRQFDFDAEDVAVEIDFGREVAAHLLGRHQLDQADRRDRYVALVGHSLVR
HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCEEHHHHHHHHH
NANRPEIDFRFAVLDTDAVKAFATPGGYIFVSRGALELMEDESELAGVLAHEIIHVTERH
CCCCCCCEEEEEEECCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
IVKELDITSGEGGIASGLARIVGGSGDPARAAFAQAVDQALEILLEEGLSKEDELEADRM
HHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
GTLLAAQSGYDPEGLRRYLERLRDHSGGETVEDGVSDTHPPLDERLQALEGFMVEMGLAD
HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCC
AERPRMGDRFQENMQ
CCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]