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The map label for this gene is cvpA [H]

Identifier: 121998578

GI number: 121998578

Start: 1971657

End: 1972220

Strand: Reverse

Name: cvpA [H]

Synonym: Hhal_1799

Alternate gene names: 121998578

Gene position: 1972220-1971657 (Counterclockwise)

Preceding gene: 121998579

Following gene: 121998577

Centisome position: 73.63

GC content: 66.84

Gene sequence:

>564_bases
ATGAACTGGCTCGACCTCGTCATCGTCGGCGTCATCGCACTGTCGGCGGGGATCAGCCTGATCCGCGGTTTCGTGCGCGA
GGTCCTCTCGGTACTCGTCTGGGTGGCCGCCTTCTGGATCGCGGTGCGCTATTCCGGGGCCGTGGCGCTGTTGCTCGAGG
AGTGGATCGCCTCGCCGACGATCCGCCTGGGTGCCGGTTTTGTCGGGCTCTTTGTGGGCACGCTGATCCTCGGGGCGCTG
CTCAATAATGCCCTCTCGGTGTTGGTGACGCGCACCGGGCTCGGGGGCACCGATCGGCTTCTGGGCGTGTTGTTCGGGGC
TGCGCGTGGCGCGGTGGTGGTGGCGCTGGTGGTGTTGCTGCTCGGTTTCTCGCCAATGACCCAGGAGCGGGCCTGGCAGG
AGTCGGTGGTGCTGCCGGGGATCAAGCCGTGGATCTGTCGAGCCGGCCTGGATGCCTGGCTGGAGGACTTTGATTGGCAA
CCGCCCGTTGAGGGCGAGGCAATGGAGGGCTTCGATGGCTTGCCGGATTACTGGGCCGAATACTGCGCCGGGCGGCGGCC
GTGA

Upstream 100 bases:

>100_bases
ACCGTGTGCGCATCGGTCCGGTCATGGAGCGGGACGAGGCGCAGGCGTTGCTCGAGCGCGCCGCTGACGAGGCCGGGGTG
GAGGGGTACGTGGTGTCGCG

Downstream 100 bases:

>100_bases
GTCCGTCGGCCGTTCCGGTGCCTAGCAAGAGGTAGGAGCAATCCATGTGTGGCGTAATCGGAATGGTGGCCAAGGGGCCG
GTGAACCAGGACCTTTACGA

Product: colicin V production protein

Products: NA

Alternate protein names: Protein dedE; Pur regulon 18 kDa protein [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNWLDLVIVGVIALSAGISLIRGFVREVLSVLVWVAAFWIAVRYSGAVALLLEEWIASPTIRLGAGFVGLFVGTLILGAL
LNNALSVLVTRTGLGGTDRLLGVLFGAARGAVVVALVVLLLGFSPMTQERAWQESVVLPGIKPWICRAGLDAWLEDFDWQ
PPVEGEAMEGFDGLPDYWAEYCAGRRP

Sequences:

>Translated_187_residues
MNWLDLVIVGVIALSAGISLIRGFVREVLSVLVWVAAFWIAVRYSGAVALLLEEWIASPTIRLGAGFVGLFVGTLILGAL
LNNALSVLVTRTGLGGTDRLLGVLFGAARGAVVVALVVLLLGFSPMTQERAWQESVVLPGIKPWICRAGLDAWLEDFDWQ
PPVEGEAMEGFDGLPDYWAEYCAGRRP
>Mature_187_residues
MNWLDLVIVGVIALSAGISLIRGFVREVLSVLVWVAAFWIAVRYSGAVALLLEEWIASPTIRLGAGFVGLFVGTLILGAL
LNNALSVLVTRTGLGGTDRLLGVLFGAARGAVVVALVVLLLGFSPMTQERAWQESVVLPGIKPWICRAGLDAWLEDFDWQ
PPVEGEAMEGFDGLPDYWAEYCAGRRP

Specific function: Required for colicin V production from plasmid IncFI ColV3-K30 [H]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788652, Length=152, Percent_Identity=40.1315789473684, Blast_Score=106, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 20152; Mature: 20152

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWLDLVIVGVIALSAGISLIRGFVREVLSVLVWVAAFWIAVRYSGAVALLLEEWIASPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
IRLGAGFVGLFVGTLILGALLNNALSVLVTRTGLGGTDRLLGVLFGAARGAVVVALVVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGFSPMTQERAWQESVVLPGIKPWICRAGLDAWLEDFDWQPPVEGEAMEGFDGLPDYWAE
HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHH
YCAGRRP
HHCCCCC
>Mature Secondary Structure
MNWLDLVIVGVIALSAGISLIRGFVREVLSVLVWVAAFWIAVRYSGAVALLLEEWIASPT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
IRLGAGFVGLFVGTLILGALLNNALSVLVTRTGLGGTDRLLGVLFGAARGAVVVALVVLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGFSPMTQERAWQESVVLPGIKPWICRAGLDAWLEDFDWQPPVEGEAMEGFDGLPDYWAE
HCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHH
YCAGRRP
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3040734; 2991286; 9205837; 9278503; 2542219 [H]