| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is nifP [H]
Identifier: 121998573
GI number: 121998573
Start: 1966479
End: 1967267
Strand: Reverse
Name: nifP [H]
Synonym: Hhal_1794
Alternate gene names: 121998573
Gene position: 1967267-1966479 (Counterclockwise)
Preceding gene: 121998574
Following gene: 121998572
Centisome position: 73.45
GC content: 68.57
Gene sequence:
>789_bases ATGCTGCGACGCCTGCGTGAGGATATCCGCTGTGTCATGGATCGCGATCCGGCCGCTCGGAACGCCTTCCATGTGGTGAC CACCTATCCCGGTTTCCACGCCCTGATCCTCCACCGCATCAGTGCCCGCCTGTGGCGCTGGCGGTTGCGCTGGGTGGCGC GCATGCTCGGGCTGTTTAGCCGCTGGGTGACGGGCATCGAGATCCATCCGGCGGCGCGGATCGGCCGGCGGTTCTTCATC GACCACGGCATGGGCGTGGTCATCGGCGAGACCGCTGATATCGGCGATGACGTGACCCTCTACCACGGGGTCACGCTGGG AGGAACCAGTTGGCAATCGGGTAAGCGCCACCCGACCCTGGGTCATGATGTTGTGGTGGGGGCCGGGGCCAAGCTGCTCG GGCCCATCCGGGTGGGCAGCGGCGCGCGCATCGGCTCCAATGCTGTGGTGCTCAAGGACGTCCCCGAGGGGGCGACCATG GTTGGGATCCCGGCGCGTCAGGTTGGCGAGCGCAAGCGCAGTGCTGACGGCGACGAGCAGCGGGCCCGGGTGGCTCGGCG CATCGGCTTCGACGCCTACGGCACCACCGAGATGCCCGACCCGGTGGCCCAGGCGGTCAACGCCATCCTGGACCACATCC ACGTCACCGACCGGCGCATCGAGGAGCTGTGCAGCGCCGTGCAGCAGATGGGCGGCCGCCTGGAAGAGACCCGGGTGCCG GATCTGGAGGTGGATGAGAGCTCGGTGGAGAAGGCGTGTGGCGAGCGCCCCGAGGACGCTTCCCGTTAG
Upstream 100 bases:
>100_bases TGGCTGACCGAGGATGAGGTACGGATGCTGCGCGGTCTGATCAGCCACGTACTCAACCCGCGCCGCTGGCGCGAGTCCAA TTGTCGTAAAGGGTAGATGG
Downstream 100 bases:
>100_bases TTGCGCGGAGCCCCTAGAATGCAAACAGGCACGTTACCGCGGTGTGCCCAGTGACAGGAGGCAAGCTATGCCAGTGACCC TGACCGAACGTGCCGCGCGG
Product: serine O-acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MLRRLREDIRCVMDRDPAARNAFHVVTTYPGFHALILHRISARLWRWRLRWVARMLGLFSRWVTGIEIHPAARIGRRFFI DHGMGVVIGETADIGDDVTLYHGVTLGGTSWQSGKRHPTLGHDVVVGAGAKLLGPIRVGSGARIGSNAVVLKDVPEGATM VGIPARQVGERKRSADGDEQRARVARRIGFDAYGTTEMPDPVAQAVNAILDHIHVTDRRIEELCSAVQQMGGRLEETRVP DLEVDESSVEKACGERPEDASR
Sequences:
>Translated_262_residues MLRRLREDIRCVMDRDPAARNAFHVVTTYPGFHALILHRISARLWRWRLRWVARMLGLFSRWVTGIEIHPAARIGRRFFI DHGMGVVIGETADIGDDVTLYHGVTLGGTSWQSGKRHPTLGHDVVVGAGAKLLGPIRVGSGARIGSNAVVLKDVPEGATM VGIPARQVGERKRSADGDEQRARVARRIGFDAYGTTEMPDPVAQAVNAILDHIHVTDRRIEELCSAVQQMGGRLEETRVP DLEVDESSVEKACGERPEDASR >Mature_262_residues MLRRLREDIRCVMDRDPAARNAFHVVTTYPGFHALILHRISARLWRWRLRWVARMLGLFSRWVTGIEIHPAARIGRRFFI DHGMGVVIGETADIGDDVTLYHGVTLGGTSWQSGKRHPTLGHDVVVGAGAKLLGPIRVGSGARIGSNAVVLKDVPEGATM VGIPARQVGERKRSADGDEQRARVARRIGFDAYGTTEMPDPVAQAVNAILDHIHVTDRRIEELCSAVQQMGGRLEETRVP DLEVDESSVEKACGERPEDASR
Specific function: Probable serine acetyltransferase required for optimizing the expression of nitrogenase activity. May be required to boost rates of synthesis or intracellular concentrations of cysteine or methionine [H]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=183, Percent_Identity=43.7158469945355, Blast_Score=136, Evalue=1e-33, Organism=Escherichia coli, GI1788371, Length=141, Percent_Identity=36.8794326241135, Blast_Score=80, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018357 - InterPro: IPR005881 - InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 28949; Mature: 28949
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRLREDIRCVMDRDPAARNAFHVVTTYPGFHALILHRISARLWRWRLRWVARMLGLFS CHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWVTGIEIHPAARIGRRFFIDHGMGVVIGETADIGDDVTLYHGVTLGGTSWQSGKRHPTL HHHCCCEECHHHHHHHHHEEECCCEEEEECCCCCCCCEEEEECEEECCCCCCCCCCCCCC GHDVVVGAGAKLLGPIRVGSGARIGSNAVVLKDVPEGATMVGIPARQVGERKRSADGDEQ CCCEEEECCCHHCCCEEECCCCEECCCEEEEEECCCCCEEECCCHHHHHHHHHCCCCHHH RARVARRIGFDAYGTTEMPDPVAQAVNAILDHIHVTDRRIEELCSAVQQMGGRLEETRVP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC DLEVDESSVEKACGERPEDASR CCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLRRLREDIRCVMDRDPAARNAFHVVTTYPGFHALILHRISARLWRWRLRWVARMLGLFS CHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWVTGIEIHPAARIGRRFFIDHGMGVVIGETADIGDDVTLYHGVTLGGTSWQSGKRHPTL HHHCCCEECHHHHHHHHHEEECCCEEEEECCCCCCCCEEEEECEEECCCCCCCCCCCCCC GHDVVVGAGAKLLGPIRVGSGARIGSNAVVLKDVPEGATMVGIPARQVGERKRSADGDEQ CCCEEEECCCHHCCCEEECCCCEECCCEEEEEECCCCCEEECCCHHHHHHHHHCCCCHHH RARVARRIGFDAYGTTEMPDPVAQAVNAILDHIHVTDRRIEELCSAVQQMGGRLEETRVP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC DLEVDESSVEKACGERPEDASR CCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1885524 [H]