Click here to switch to the map view.

The map label for this gene is yfgL [H]

Identifier: 121998565

GI number: 121998565

Start: 1960051

End: 1961196

Strand: Reverse

Name: yfgL [H]

Synonym: Hhal_1786

Alternate gene names: 121998565

Gene position: 1961196-1960051 (Counterclockwise)

Preceding gene: 121998566

Following gene: 121998563

Centisome position: 73.22

GC content: 71.47

Gene sequence:

>1146_bases
GTGATCCGCGTCGGACTGCGCGCCCTCGGTGCCGCTGCGGCGCTCGGCGTGGCCGCAGCCGGCTGTTCCTTGCAGGACCC
GCTGCCCAATCCGCAGACCGAGGCGGATGAGGCGCTGGATGTCGAATTGGCGTGGAGCGGGCGGCCGGTGGGCAGTCTGG
AATCCGGTGCCTTCGCGCTGCAGCCCGCGTATGCGGACGGCGTGCTCTATGTGGCCGACGCCCGCGGCTGGGTCCGGGCC
CTGGATGCCGAGACCCGTCAGCCCGTCTGGCACGATCGCCTGGAGCGGCCGCTCTCCGCCGGGCCGGTGGTAGCCGGGGA
CCGTCTGCTGGTGGGGGACCGCAAGGGCCGAATCTACGCCTACGAGCGGGAGAGCGGTGAGCCGGTCTGGATGACCGGCC
TGTCGGCGCAGGTCCTGGCGAGTCCGCGCTACACCCGCGGGGTGGTGGTGGCCCGCAGCGCCGATGGACGGGTCTACGGT
CTCGACGCCGAGGATGGGTCGCGGCAGTGGATCTTTGACCGCAGTGTGCCCGCCCTGACCCTGCGCCGGAACAGTGCCCC
GGCGGTCAGCGGTGGTACCGCGGTGGTGGGTCTCCAGAACGGCCGGCTCGCGGCGCTGAACGTGGCGGATGGCAGCGTGC
GCTGGGAGCACACCCTGACCGAGCCGAGGGGGCGTACCGAGCTCGAGCGGATGGCGGACATCGCGGCCGATCCGGTCATC
CATCGCGGTGCGGCCTATGCAGTGGCCTACCAGGGCGCGATCGGCGCAGTGCGGATCGCCAATGGCGCCCAGCACTGGAG
CCGCGAGGTGGGCAGCCATCGAGGGTTGGTCGCCCACGATGAAGAGGTCTACCTGGCCGCCGATGACGGCCGGGTCTGGG
CCTTTGATCGCCGAAATGGCGCCACAGCTTGGCGGCAGGAGGCCCTGGAGGGGCTGACCCTGACCCGTCCGGTGGTCCAC
GAGGGCTATCTGGTCATGGGAGACGACGCCGGTCACGTCAACTGGCTGCGCCTCAGGGATGGCGAACTCGTGGCCCGCGA
GCGCCTCTCCGATGTCCCAGTGGAGCGGCCGCCGGTGGTGACCGGCAGCGGTGATGTCTACGTCATGGATGCCCGCGGGC
GGATGACCGCGCTGCGCCCGCGTTAG

Upstream 100 bases:

>100_bases
AGGCCGCCGAGGCGTACCAGCAGGCGCTGGATCAGGAGGGGCTCGGGGCGCAGTCCCGCGAACTGGTCCGTCTGAAGCTG
CAGGCCGTGGAGAGTGAGGC

Downstream 100 bases:

>100_bases
GCGCAGCGGGCTCCGGGAGGCTGCGGACGCCTACTCGCATTCGCCCACCGAGGTGGGCCGGCAGCGGCGGCCGTCGGTCC
ACAATGTGCTGCCGAGGCCC

Product: Pyrrolo-quinoline quinone

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MIRVGLRALGAAAALGVAAAGCSLQDPLPNPQTEADEALDVELAWSGRPVGSLESGAFALQPAYADGVLYVADARGWVRA
LDAETRQPVWHDRLERPLSAGPVVAGDRLLVGDRKGRIYAYERESGEPVWMTGLSAQVLASPRYTRGVVVARSADGRVYG
LDAEDGSRQWIFDRSVPALTLRRNSAPAVSGGTAVVGLQNGRLAALNVADGSVRWEHTLTEPRGRTELERMADIAADPVI
HRGAAYAVAYQGAIGAVRIANGAQHWSREVGSHRGLVAHDEEVYLAADDGRVWAFDRRNGATAWRQEALEGLTLTRPVVH
EGYLVMGDDAGHVNWLRLRDGELVARERLSDVPVERPPVVTGSGDVYVMDARGRMTALRPR

Sequences:

>Translated_381_residues
MIRVGLRALGAAAALGVAAAGCSLQDPLPNPQTEADEALDVELAWSGRPVGSLESGAFALQPAYADGVLYVADARGWVRA
LDAETRQPVWHDRLERPLSAGPVVAGDRLLVGDRKGRIYAYERESGEPVWMTGLSAQVLASPRYTRGVVVARSADGRVYG
LDAEDGSRQWIFDRSVPALTLRRNSAPAVSGGTAVVGLQNGRLAALNVADGSVRWEHTLTEPRGRTELERMADIAADPVI
HRGAAYAVAYQGAIGAVRIANGAQHWSREVGSHRGLVAHDEEVYLAADDGRVWAFDRRNGATAWRQEALEGLTLTRPVVH
EGYLVMGDDAGHVNWLRLRDGELVARERLSDVPVERPPVVTGSGDVYVMDARGRMTALRPR
>Mature_381_residues
MIRVGLRALGAAAALGVAAAGCSLQDPLPNPQTEADEALDVELAWSGRPVGSLESGAFALQPAYADGVLYVADARGWVRA
LDAETRQPVWHDRLERPLSAGPVVAGDRLLVGDRKGRIYAYERESGEPVWMTGLSAQVLASPRYTRGVVVARSADGRVYG
LDAEDGSRQWIFDRSVPALTLRRNSAPAVSGGTAVVGLQNGRLAALNVADGSVRWEHTLTEPRGRTELERMADIAADPVI
HRGAAYAVAYQGAIGAVRIANGAQHWSREVGSHRGLVAHDEEVYLAADDGRVWAFDRRNGATAWRQEALEGLTLTRPVVH
EGYLVMGDDAGHVNWLRLRDGELVARERLSDVPVERPPVVTGSGDVYVMDARGRMTALRPR

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=362, Percent_Identity=31.4917127071823, Blast_Score=204, Evalue=7e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 41069; Mature: 41069

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVGLRALGAAAALGVAAAGCSLQDPLPNPQTEADEALDVELAWSGRPVGSLESGAFAL
CEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEE
QPAYADGVLYVADARGWVRALDAETRQPVWHDRLERPLSAGPVVAGDRLLVGDRKGRIYA
EECCCCCEEEEECCCCEEEECCCCCCCCHHHHHHCCCCCCCCEEECCEEEEECCCCCEEE
YERESGEPVWMTGLSAQVLASPRYTRGVVVARSADGRVYGLDAEDGSRQWIFDRSVPALT
EECCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCEEE
LRRNSAPAVSGGTAVVGLQNGRLAALNVADGSVRWEHTLTEPRGRTELERMADIAADPVI
EECCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH
HRGAAYAVAYQGAIGAVRIANGAQHWSREVGSHRGLVAHDEEVYLAADDGRVWAFDRRNG
HCCCEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEECCCC
ATAWRQEALEGLTLTRPVVHEGYLVMGDDAGHVNWLRLRDGELVARERLSDVPVERPPVV
CHHHHHHHHCCCEEECCHHHCCEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEE
TGSGDVYVMDARGRMTALRPR
ECCCCEEEEECCCCEEECCCC
>Mature Secondary Structure
MIRVGLRALGAAAALGVAAAGCSLQDPLPNPQTEADEALDVELAWSGRPVGSLESGAFAL
CEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEE
QPAYADGVLYVADARGWVRALDAETRQPVWHDRLERPLSAGPVVAGDRLLVGDRKGRIYA
EECCCCCEEEEECCCCEEEECCCCCCCCHHHHHHCCCCCCCCEEECCEEEEECCCCCEEE
YERESGEPVWMTGLSAQVLASPRYTRGVVVARSADGRVYGLDAEDGSRQWIFDRSVPALT
EECCCCCEEEEECCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEECCCCEEE
LRRNSAPAVSGGTAVVGLQNGRLAALNVADGSVRWEHTLTEPRGRTELERMADIAADPVI
EECCCCCCCCCCEEEEEECCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHCCCHH
HRGAAYAVAYQGAIGAVRIANGAQHWSREVGSHRGLVAHDEEVYLAADDGRVWAFDRRNG
HCCCEEEEEECCCCEEEEECCCHHHHHHHHHCCCCEEEECCEEEEEECCCEEEEEECCCC
ATAWRQEALEGLTLTRPVVHEGYLVMGDDAGHVNWLRLRDGELVARERLSDVPVERPPVV
CHHHHHHHHCCCEEECCHHHCCEEEECCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEE
TGSGDVYVMDARGRMTALRPR
ECCCCEEEEECCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]