| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is 121998515
Identifier: 121998515
GI number: 121998515
Start: 1902072
End: 1903742
Strand: Reverse
Name: 121998515
Synonym: Hhal_1736
Alternate gene names: NA
Gene position: 1903742-1902072 (Counterclockwise)
Preceding gene: 121998516
Following gene: 121998514
Centisome position: 71.08
GC content: 72.29
Gene sequence:
>1671_bases ATGGACCGCGAAGAGCTCCAGCAGACCCTCACCGAACTCCGCCAGGACCTGCATGGCCTCGATGGCGAGGCCGCTCGGGA TCGCGATGCCCCCTGGCTGCTCCCCTGGGAGCGCCTGCTGCGCCGCATCGATGGCCTCATCGCTCGGCTGGAGCGCCAGG ATGAGCCGCTTCTGGTGGTGTTTGCCGGCGGCACGGGGGCCGGGAAATCGACGCTGGCCAACACCCTGGCGGGGTCTGCG GTCGCCGCGACCAGCGCGCGCCGCCCCACCACCTCGGTGCCTACGGTCATCGGCCGAGCGGCGGACCTGGATACAGTCCT GCGCCGTGGGGTATTGGCGGCCGAGGCCGAGCGCGCCGCCCTGCGTACGGCCCCTCTGGAGACGGTACCGGAGGGGGTGG TGGTGGTGGATGCGCCGGATGTGGACAGCGTCGAGACCGCCAATCGTGCCGCCACCGAGCGTCTGCTGGAGGTGGCCGAT GTCTGGGTCTGGCTGGCGACCGCCCGCACCTACGCCGACGAGGCGGGTATGGCCTATCTGCGCCAGGCGGCCCAGCTGGA CGTCTCGACGCTGGTCGTGCTCACCCAGGCGACCGAGGCCGAGGCGCGGGAGATCCTCCCCGACCTGGCCGAGAAGCTGG ATGCGGCCGGCCATCGGGCAGTCGAGACGACGCACCTGCCCACGGCGCCGGTCTCTGACGAGCGCCTGCCCGATTCGGCA GCGGCGCCGGTGCTCGAGCGGATCCGTGCCCTGGCGCCGGCGGACCAGCGTGCTGCCCACCGGCGCCGAACGGTGCTCGG CGCAGTGCGTTACCTGCCGGCAGAGGTCGATGCCCTGCTCGAGGCCGTCGAGGCGGAGCGGACCGCGGCCCGCAGGCTGG CTGCCGTCATCGATGAAGGCTACACCGATGTCCCCGAGCGCTTGCTGACCCAGCTCCAGGAGGGCGAGCCCCTGCGCCGT GAGGTGCTCCGCCGCTGGACCGAGCTGGTCGGGAGTGGCTGGCTGCAGCGTCAGCTGCACGCCGCGGTGGGGCAGCTCTC GCCGCGGCGCTGGCTGGGATGGCTGCCGCTCCCTCGCGGTGGTCGGCAGGTCGAGCAGGAGGCCAAGGAGGAGGCGCGGG CTGGCATCGCCGAGATGCTGCACGCCGTCCTCGACCAGGCCGCCGCCGGCGTAGAGAGTGCGTGGCAGCAGGATCCGGTC GGGCGGGGGATCTTCGCCCGCTATCCGCGGCCGCGGTCAACCGCGGCCATTGCGCGCCGTGCCGACGCCGAGGCGCTGGT GGCGGCCTGGGAGCAGCAGGTTGCCGAACACGTCGCTACCATCGGGCGGGCCAAGCTCAGTTGGGCACGCCGTGCGACCA CGGGGATCAACGCCACCTTCACCAGCGCCGTGCTGGTCCTCTTCACCCTCAGTGGCGGGTTGAGCACCGGCGAGCTGGCG CTGACCGCTGCCGGTTCCACCACCACCCATACAGTCCTCTCGCGGATCCTCGGTGAGCGCAATGTCCATCAGCTCATCAC CGATATCCGCGCGGATCTCCACGCCCGGGTGGCCGCCCTGGCGGAGTCCGAGGCGCAGGCCTACCACCGGTTATTGACGG CGGCGGCCCCGTCCCCGGAGGCGGTGAGCGCCGTGCAGGCTCGTCGGGATGCGCTGGAGGCCCTGGTCTGA
Upstream 100 bases:
>100_bases GAAAAGACGGACTAGCCGCTCGGGTGCCGTCCCGGCCCTGTGACACCGATCGTGCACCGGGCACGTGATCACCGGCGGGG TTTCCCTGTATCTTGTCGTG
Downstream 100 bases:
>100_bases TGCGCTGGGCGGGAGCAAGTGCCGAGGCGCCGACGCGTGCGCCGAGCGCCGCCGGCGACACCGGCCTGGACGCCCTGCAG ACGCTCCAGACGCTCGGTGT
Product: putative ABC transporter
Products: NA
Alternate protein names: AAA ATPase; GTPase
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MDREELQQTLTELRQDLHGLDGEAARDRDAPWLLPWERLLRRIDGLIARLERQDEPLLVVFAGGTGAGKSTLANTLAGSA VAATSARRPTTSVPTVIGRAADLDTVLRRGVLAAEAERAALRTAPLETVPEGVVVVDAPDVDSVETANRAATERLLEVAD VWVWLATARTYADEAGMAYLRQAAQLDVSTLVVLTQATEAEAREILPDLAEKLDAAGHRAVETTHLPTAPVSDERLPDSA AAPVLERIRALAPADQRAAHRRRTVLGAVRYLPAEVDALLEAVEAERTAARRLAAVIDEGYTDVPERLLTQLQEGEPLRR EVLRRWTELVGSGWLQRQLHAAVGQLSPRRWLGWLPLPRGGRQVEQEAKEEARAGIAEMLHAVLDQAAAGVESAWQQDPV GRGIFARYPRPRSTAAIARRADAEALVAAWEQQVAEHVATIGRAKLSWARRATTGINATFTSAVLVLFTLSGGLSTGELA LTAAGSTTTHTVLSRILGERNVHQLITDIRADLHARVAALAESEAQAYHRLLTAAAPSPEAVSAVQARRDALEALV
Sequences:
>Translated_556_residues MDREELQQTLTELRQDLHGLDGEAARDRDAPWLLPWERLLRRIDGLIARLERQDEPLLVVFAGGTGAGKSTLANTLAGSA VAATSARRPTTSVPTVIGRAADLDTVLRRGVLAAEAERAALRTAPLETVPEGVVVVDAPDVDSVETANRAATERLLEVAD VWVWLATARTYADEAGMAYLRQAAQLDVSTLVVLTQATEAEAREILPDLAEKLDAAGHRAVETTHLPTAPVSDERLPDSA AAPVLERIRALAPADQRAAHRRRTVLGAVRYLPAEVDALLEAVEAERTAARRLAAVIDEGYTDVPERLLTQLQEGEPLRR EVLRRWTELVGSGWLQRQLHAAVGQLSPRRWLGWLPLPRGGRQVEQEAKEEARAGIAEMLHAVLDQAAAGVESAWQQDPV GRGIFARYPRPRSTAAIARRADAEALVAAWEQQVAEHVATIGRAKLSWARRATTGINATFTSAVLVLFTLSGGLSTGELA LTAAGSTTTHTVLSRILGERNVHQLITDIRADLHARVAALAESEAQAYHRLLTAAAPSPEAVSAVQARRDALEALV >Mature_556_residues MDREELQQTLTELRQDLHGLDGEAARDRDAPWLLPWERLLRRIDGLIARLERQDEPLLVVFAGGTGAGKSTLANTLAGSA VAATSARRPTTSVPTVIGRAADLDTVLRRGVLAAEAERAALRTAPLETVPEGVVVVDAPDVDSVETANRAATERLLEVAD VWVWLATARTYADEAGMAYLRQAAQLDVSTLVVLTQATEAEAREILPDLAEKLDAAGHRAVETTHLPTAPVSDERLPDSA AAPVLERIRALAPADQRAAHRRRTVLGAVRYLPAEVDALLEAVEAERTAARRLAAVIDEGYTDVPERLLTQLQEGEPLRR EVLRRWTELVGSGWLQRQLHAAVGQLSPRRWLGWLPLPRGGRQVEQEAKEEARAGIAEMLHAVLDQAAAGVESAWQQDPV GRGIFARYPRPRSTAAIARRADAEALVAAWEQQVAEHVATIGRAKLSWARRATTGINATFTSAVLVLFTLSGGLSTGELA LTAAGSTTTHTVLSRILGERNVHQLITDIRADLHARVAALAESEAQAYHRLLTAAAPSPEAVSAVQARRDALEALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60031; Mature: 60031
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: PS00227 TUBULIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDREELQQTLTELRQDLHGLDGEAARDRDAPWLLPWERLLRRIDGLIARLERQDEPLLVV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE FAGGTGAGKSTLANTLAGSAVAATSARRPTTSVPTVIGRAADLDTVLRRGVLAAEAERAA EECCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHH LRTAPLETVPEGVVVVDAPDVDSVETANRAATERLLEVADVWVWLATARTYADEAGMAYL HHHCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAAQLDVSTLVVLTQATEAEAREILPDLAEKLDAAGHRAVETTHLPTAPVSDERLPDSA HHHHHCCHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHH AAPVLERIRALAPADQRAAHRRRTVLGAVRYLPAEVDALLEAVEAERTAARRLAAVIDEG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTDVPERLLTQLQEGEPLRREVLRRWTELVGSGWLQRQLHAAVGQLSPRRWLGWLPLPRG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCCCCCC GRQVEQEAKEEARAGIAEMLHAVLDQAAAGVESAWQQDPVGRGIFARYPRPRSTAAIARR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHH ADAEALVAAWEQQVAEHVATIGRAKLSWARRATTGINATFTSAVLVLFTLSGGLSTGELA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE LTAAGSTTTHTVLSRILGERNVHQLITDIRADLHARVAALAESEAQAYHRLLTAAAPSPE EEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVSAVQARRDALEALV HHHHHHHHHHHHHHCC >Mature Secondary Structure MDREELQQTLTELRQDLHGLDGEAARDRDAPWLLPWERLLRRIDGLIARLERQDEPLLVV CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE FAGGTGAGKSTLANTLAGSAVAATSARRPTTSVPTVIGRAADLDTVLRRGVLAAEAERAA EECCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHCCHHHHHHHHHH LRTAPLETVPEGVVVVDAPDVDSVETANRAATERLLEVADVWVWLATARTYADEAGMAYL HHHCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQAAQLDVSTLVVLTQATEAEAREILPDLAEKLDAAGHRAVETTHLPTAPVSDERLPDSA HHHHHCCHHHHHHEECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCHH AAPVLERIRALAPADQRAAHRRRTVLGAVRYLPAEVDALLEAVEAERTAARRLAAVIDEG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YTDVPERLLTQLQEGEPLRREVLRRWTELVGSGWLQRQLHAAVGQLSPRRWLGWLPLPRG CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHCCCCCCCCC GRQVEQEAKEEARAGIAEMLHAVLDQAAAGVESAWQQDPVGRGIFARYPRPRSTAAIARR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHH ADAEALVAAWEQQVAEHVATIGRAKLSWARRATTGINATFTSAVLVLFTLSGGLSTGELA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEE LTAAGSTTTHTVLSRILGERNVHQLITDIRADLHARVAALAESEAQAYHRLLTAAAPSPE EEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AVSAVQARRDALEALV HHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA