| Definition | Halorhodospira halophila SL1 chromosome, complete genome. |
|---|---|
| Accession | NC_008789 |
| Length | 2,678,452 |
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The map label for this gene is znuB [H]
Identifier: 121998506
GI number: 121998506
Start: 1894167
End: 1894970
Strand: Reverse
Name: znuB [H]
Synonym: Hhal_1727
Alternate gene names: 121998506
Gene position: 1894970-1894167 (Counterclockwise)
Preceding gene: 121998507
Following gene: 121998504
Centisome position: 70.75
GC content: 68.03
Gene sequence:
>804_bases GTGGCCGTGGATGAGTTTATCCTCACGGCGCTGGCTGCCGGACTGGGGCTGGCCCTGGTGGCCGGGCCGCTGGGCAGCTT CGTGGTCTGGCGGCGCATGGCCTACTTCGGCGAGACCCTGGCGCACTCTGCGCTGCTGGGCGTGGCCCTGGGGTTCCTCT TCGGTATCAACCTGAATCTTGGCATCCTGATGGTCTGCGTCGTGGTGGCCGTTCTGTTGGTGGTCCTGCGTCAGTACCAG CGGCTGGCCAGCGATACGGTCCTCGGTATCCTGGCGCACAGCTCGCTGTCCTTAGGGCTGGTGGCCATCGCCTTCATGGA GGGGCTGCGTGTCGACCTGATGGGCTACCTCTTCGGCGATATCCTGGCGGTGACGCCCACCGACCTCTACTGGATTTACG GCGGTGGGGTCCTGGTGCTGGGGACGCTGATCGGGATCTGGCGCCCGCTGCTGAGTCTCACCCTGCACGAGGAGATGGCC CGGGTGGAGGGGGTCCGCGTGCTGCCGGTTCAGCTCGCCTTCATGGCGCTGGTGGCGGCCACCATTGCCCTGGCCATGCA GATCGTCGGCATCCTGCTGGTGATCTCCATGCTGATCATCCCTGCCGCCGCGGCGCGGGCCTTCGCCCGGACCCCGGAGC AGATGGCGGTGATCGCCGCCTTGATCGGTGCGCTGGCGGTGGTCGGCGGGCTGGCCGGTTCGTTCCGCTGGGATCTGCCC ACCGGCCCGGCCATCGTGGTGACGGCCACGGCCATCTTCGCGGTAGTGACCAGTGCGCGGGGGGTGGTGGCGGCGCGTTT TTAG
Upstream 100 bases:
>100_bases CATCCTGAGTACCAGAAGCTCTTCGGTTCACACCTGGGGCCGGACACCGGGGTGTTTCCCCACGATCACCACGACCATTC GGGCCCTGCCCTGGCAGGAG
Downstream 100 bases:
>100_bases GCCGTCATGGCCCGTAGAGGGTTTGTGGGTCGACCTGAGGCGGTTCGCTGACCACCACCCGGTTACCTTGCAGCACGTTG TAGAAGCAGCTCCTTCGGCC
Product: ABC-3 protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAVDEFILTALAAGLGLALVAGPLGSFVVWRRMAYFGETLAHSALLGVALGFLFGINLNLGILMVCVVVAVLLVVLRQYQ RLASDTVLGILAHSSLSLGLVAIAFMEGLRVDLMGYLFGDILAVTPTDLYWIYGGGVLVLGTLIGIWRPLLSLTLHEEMA RVEGVRVLPVQLAFMALVAATIALAMQIVGILLVISMLIIPAAAARAFARTPEQMAVIAALIGALAVVGGLAGSFRWDLP TGPAIVVTATAIFAVVTSARGVVAARF
Sequences:
>Translated_267_residues MAVDEFILTALAAGLGLALVAGPLGSFVVWRRMAYFGETLAHSALLGVALGFLFGINLNLGILMVCVVVAVLLVVLRQYQ RLASDTVLGILAHSSLSLGLVAIAFMEGLRVDLMGYLFGDILAVTPTDLYWIYGGGVLVLGTLIGIWRPLLSLTLHEEMA RVEGVRVLPVQLAFMALVAATIALAMQIVGILLVISMLIIPAAAARAFARTPEQMAVIAALIGALAVVGGLAGSFRWDLP TGPAIVVTATAIFAVVTSARGVVAARF >Mature_266_residues AVDEFILTALAAGLGLALVAGPLGSFVVWRRMAYFGETLAHSALLGVALGFLFGINLNLGILMVCVVVAVLLVVLRQYQR LASDTVLGILAHSSLSLGLVAIAFMEGLRVDLMGYLFGDILAVTPTDLYWIYGGGVLVLGTLIGIWRPLLSLTLHEEMAR VEGVRVLPVQLAFMALVAATIALAMQIVGILLVISMLIIPAAAARAFARTPEQMAVIAALIGALAVVGGLAGSFRWDLPT GPAIVVTATAIFAVVTSARGVVAARF
Specific function: Involved in the high-affinity zinc uptake transport system [H]
COG id: COG1108
COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ABC-3 integral membrane protein family [H]
Homologues:
Organism=Escherichia coli, GI1788166, Length=249, Percent_Identity=53.0120481927711, Blast_Score=239, Evalue=2e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001626 [H]
Pfam domain/function: PF00950 ABC-3 [H]
EC number: NA
Molecular weight: Translated: 27879; Mature: 27748
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVDEFILTALAAGLGLALVAGPLGSFVVWRRMAYFGETLAHSALLGVALGFLFGINLNL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GILMVCVVVAVLLVVLRQYQRLASDTVLGILAHSSLSLGLVAIAFMEGLRVDLMGYLFGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAVTPTDLYWIYGGGVLVLGTLIGIWRPLLSLTLHEEMARVEGVRVLPVQLAFMALVAA HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TIALAMQIVGILLVISMLIIPAAAARAFARTPEQMAVIAALIGALAVVGGLAGSFRWDLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCC TGPAIVVTATAIFAVVTSARGVVAARF CCCCHHHHHHHHHHHHHHCCCHHEECC >Mature Secondary Structure AVDEFILTALAAGLGLALVAGPLGSFVVWRRMAYFGETLAHSALLGVALGFLFGINLNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH GILMVCVVVAVLLVVLRQYQRLASDTVLGILAHSSLSLGLVAIAFMEGLRVDLMGYLFGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILAVTPTDLYWIYGGGVLVLGTLIGIWRPLLSLTLHEEMARVEGVRVLPVQLAFMALVAA HHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH TIALAMQIVGILLVISMLIIPAAAARAFARTPEQMAVIAALIGALAVVGGLAGSFRWDLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEECCC TGPAIVVTATAIFAVVTSARGVVAARF CCCCHHHHHHHHHHHHHHCCCHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 2842314; 7984428; 9680209 [H]